RNA–Protein interactions for RNA: ENST00000515704.1

LINC02208-202, Transcript of long intergenic non-protein coding RNA 2208, humanhuman

TSL 5

Gene LINC02208, Length 718 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02208-202ENST00000515704 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
LINC02208-202ENST00000515704 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
LINC02208-202ENST00000515704 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
LINC02208-202ENST00000515704 CEP164Q9UPV0 1460 aa12.78□□□□□ -0.36
LINC02208-202ENST00000515704 CFTRP13569 1480 aa12.78□□□□□ -0.36
LINC02208-202ENST00000515704 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
LINC02208-202ENST00000515704 FANCD2Q9BXW9 1451 aa12.75□□□□□ -0.37
LINC02208-202ENST00000515704 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
LINC02208-202ENST00000515704 WIZO95785 1651 aa12.72□□□□□ -0.37
LINC02208-202ENST00000515704 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.38
LINC02208-202ENST00000515704 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
LINC02208-202ENST00000515704 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
LINC02208-202ENST00000515704 PRR29P0C7W0 189 aa12.67□□□□□ -0.38
LINC02208-202ENST00000515704 TRIM41Q8WV44 630 aa12.66□□□□□ -0.38
LINC02208-202ENST00000515704 MIER1Q8N108 512 aa12.6□□□□□ -0.39
LINC02208-202ENST00000515704 URB2Q14146 1524 aaKnown RBP12.6□□□□□ -0.39
LINC02208-202ENST00000515704 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
LINC02208-202ENST00000515704 ABCC8Q09428 1581 aa12.59□□□□□ -0.39
LINC02208-202ENST00000515704 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
LINC02208-202ENST00000515704 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
LINC02208-202ENST00000515704 IFNLR1Q8IU57 520 aaPredicted RBP12.55□□□□□ -0.4
LINC02208-202ENST00000515704 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
LINC02208-202ENST00000515704 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
LINC02208-202ENST00000515704 CCDC88BA6NC98 1476 aa12.52□□□□□ -0.41
LINC02208-202ENST00000515704 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC02208-202ENST00000515704 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
LINC02208-202ENST00000515704 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
LINC02208-202ENST00000515704 KLHL34Q8N239 644 aa12.47□□□□□ -0.41
LINC02208-202ENST00000515704 PIP4P2Q8N4L2 257 aa12.45□□□□□ -0.42
LINC02208-202ENST00000515704 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
LINC02208-202ENST00000515704 ZNF608Q9ULD9 1512 aaPredicted RBP12.44□□□□□ -0.42
LINC02208-202ENST00000515704 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
LINC02208-202ENST00000515704 CHADLQ6NUI6 762 aa12.43□□□□□ -0.42
LINC02208-202ENST00000515704 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
LINC02208-202ENST00000515704 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
LINC02208-202ENST00000515704 ARHGEF11O15085 1522 aa12.41□□□□□ -0.42
LINC02208-202ENST00000515704 RIMBP3CA6NJZ7 1639 aa12.4□□□□□ -0.42
LINC02208-202ENST00000515704 RIMBP3BA6NNM3 1639 aa12.4□□□□□ -0.42
LINC02208-202ENST00000515704 RIMBP3Q9UFD9 1639 aa12.4□□□□□ -0.42
LINC02208-202ENST00000515704 SPOCK2Q92563 424 aa12.38□□□□□ -0.43
LINC02208-202ENST00000515704 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
LINC02208-202ENST00000515704 EIF4G3O43432 1585 aaKnown RBP12.36□□□□□ -0.43
LINC02208-202ENST00000515704 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
LINC02208-202ENST00000515704 TARBP1Q13395 1621 aaKnown RBP12.34□□□□□ -0.43
LINC02208-202ENST00000515704 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
LINC02208-202ENST00000515704 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC02208-202ENST00000515704 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
LINC02208-202ENST00000515704 SOGA1O94964 1423 aa12.32□□□□□ -0.44
LINC02208-202ENST00000515704 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC02208-202ENST00000515704 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
LINC02208-202ENST00000515704 MAGI1Q96QZ7 1491 aaPredicted RBP12.28□□□□□ -0.44
LINC02208-202ENST00000515704 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
LINC02208-202ENST00000515704 NUBP1P53384 320 aa12.27□□□□□ -0.45
LINC02208-202ENST00000515704 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
LINC02208-202ENST00000515704 ARAP1Q96P48 1450 aa12.26□□□□□ -0.45
LINC02208-202ENST00000515704 TDRD9Q8NDG6 1382 aaKnown RBP12.25□□□□□ -0.45
LINC02208-202ENST00000515704 GRIN2BQ13224 1484 aa12.25□□□□□ -0.45
LINC02208-202ENST00000515704 RAD54L2Q9Y4B4 1467 aa12.24□□□□□ -0.45
LINC02208-202ENST00000515704 FGD5Q6ZNL6 1462 aa12.23□□□□□ -0.45
LINC02208-202ENST00000515704 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
LINC02208-202ENST00000515704 SYNJ2O15056 1496 aa12.22□□□□□ -0.45
LINC02208-202ENST00000515704 SNAPC4Q5SXM2 1469 aa12.22□□□□□ -0.45
LINC02208-202ENST00000515704 CHD1O14646 1710 aa12.21□□□□□ -0.45
LINC02208-202ENST00000515704 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.46
LINC02208-202ENST00000515704 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
LINC02208-202ENST00000515704 CUX1P39880 1505 aa12.18□□□□□ -0.46
LINC02208-202ENST00000515704 GSE1Q14687 1217 aa12.17□□□□□ -0.46
LINC02208-202ENST00000515704 FAM212AQ96EL1 285 aa12.17□□□□□ -0.46
LINC02208-202ENST00000515704 GAPVD1Q14C86 1478 aa12.16□□□□□ -0.46
LINC02208-202ENST00000515704 DCAF8Q5TAQ9 597 aa12.16□□□□□ -0.46
LINC02208-202ENST00000515704 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
LINC02208-202ENST00000515704 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
LINC02208-202ENST00000515704 PKD2Q13563 968 aa12.15□□□□□ -0.46
LINC02208-202ENST00000515704 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
LINC02208-202ENST00000515704 POTEHQ6S545 545 aa12.11□□□□□ -0.47
LINC02208-202ENST00000515704 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
LINC02208-202ENST00000515704 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
LINC02208-202ENST00000515704 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
LINC02208-202ENST00000515704 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
LINC02208-202ENST00000515704 ABCA5Q8WWZ7 1642 aa12.07□□□□□ -0.48
LINC02208-202ENST00000515704 NUP160Q12769 1436 aa12.06□□□□□ -0.48
LINC02208-202ENST00000515704 GRIN2AQ12879 1464 aa12.06□□□□□ -0.48
LINC02208-202ENST00000515704 FHAD1B1AJZ9 1412 aa12.05□□□□□ -0.48
LINC02208-202ENST00000515704 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
LINC02208-202ENST00000515704 HAX1O00165 279 aa12.03□□□□□ -0.48
LINC02208-202ENST00000515704 CCDC61Q9Y6R9 512 aa12.03□□□□□ -0.48
LINC02208-202ENST00000515704 PBRM1Q86U86 1689 aa12.03□□□□□ -0.48
LINC02208-202ENST00000515704 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
LINC02208-202ENST00000515704 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
LINC02208-202ENST00000515704 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
LINC02208-202ENST00000515704 TOP2BQ02880 1626 aa12□□□□□ -0.49
LINC02208-202ENST00000515704 PYGBP11216 843 aa11.99□□□□□ -0.49
LINC02208-202ENST00000515704 ADAMTS12P58397 1594 aa11.98□□□□□ -0.49
LINC02208-202ENST00000515704 BIVM-ERCC5R4GMW8 1640 aa11.96□□□□□ -0.5
LINC02208-202ENST00000515704 CEP170Q5SW79 1584 aa11.96□□□□□ -0.5
LINC02208-202ENST00000515704 SUPT5HO00267 1087 aaKnown RBP11.95□□□□□ -0.5
LINC02208-202ENST00000515704 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
LINC02208-202ENST00000515704 SHROOM2Q13796 1616 aa11.95□□□□□ -0.5
LINC02208-202ENST00000515704 RGL2O15211 777 aa11.94□□□□□ -0.5
LINC02208-202ENST00000515704 EVX2Q03828 476 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms