RNA–Protein interactions for RNA: ENST00000515704.1

LINC02208-202, Transcript of long intergenic non-protein coding RNA 2208, humanhuman

TSL 5

Gene LINC02208, Length 718 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02208-202ENST00000515704 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
LINC02208-202ENST00000515704 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
LINC02208-202ENST00000515704 PHF23Q9BUL5 403 aaPredicted RBP20.13■□□□□ 0.81
LINC02208-202ENST00000515704 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
LINC02208-202ENST00000515704 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
LINC02208-202ENST00000515704 FOXD1Q16676 465 aa18.38■□□□□ 0.53
LINC02208-202ENST00000515704 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
LINC02208-202ENST00000515704 ADRA2BP18089 450 aa17.72■□□□□ 0.43
LINC02208-202ENST00000515704 PIAS4Q8N2W9 510 aaPredicted RBP17.33■□□□□ 0.36
LINC02208-202ENST00000515704 MSH5O43196 834 aa16.93■□□□□ 0.3
LINC02208-202ENST00000515704 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
LINC02208-202ENST00000515704 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
LINC02208-202ENST00000515704 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
LINC02208-202ENST00000515704 KCNA4P22459 653 aa16.11■□□□□ 0.17
LINC02208-202ENST00000515704 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
LINC02208-202ENST00000515704 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
LINC02208-202ENST00000515704 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
LINC02208-202ENST00000515704 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
LINC02208-202ENST00000515704 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.12
LINC02208-202ENST00000515704 RNF216Q9NWF9 866 aaPredicted RBP15.62■□□□□ 0.09
LINC02208-202ENST00000515704 HOXD11P31277 338 aaPredicted RBP15.54■□□□□ 0.08
LINC02208-202ENST00000515704 SLC4A1APQ9BWU0 796 aaKnown RBP15.35■□□□□ 0.05
LINC02208-202ENST00000515704 DNAJC5BQ9UF47 199 aa15.34■□□□□ 0.05
LINC02208-202ENST00000515704 POTEDQ86YR6 584 aa15.27■□□□□ 0.04
LINC02208-202ENST00000515704 ABCC9O60706 1549 aa15.22■□□□□ 0.03
LINC02208-202ENST00000515704 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
LINC02208-202ENST00000515704 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
LINC02208-202ENST00000515704 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
LINC02208-202ENST00000515704 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
LINC02208-202ENST00000515704 ZBTB22O15209 634 aa14.82□□□□□ -0.04
LINC02208-202ENST00000515704 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
LINC02208-202ENST00000515704 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
LINC02208-202ENST00000515704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.79□□□□□ -0.04
LINC02208-202ENST00000515704 MYCNP04198 464 aaPredicted RBP14.57□□□□□ -0.08
LINC02208-202ENST00000515704 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
LINC02208-202ENST00000515704 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
LINC02208-202ENST00000515704 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
LINC02208-202ENST00000515704 NACADO15069 1562 aa14.48□□□□□ -0.09
LINC02208-202ENST00000515704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
LINC02208-202ENST00000515704 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
LINC02208-202ENST00000515704 SAMD1Q6SPF0 538 aaPredicted RBP14.37□□□□□ -0.11
LINC02208-202ENST00000515704 C1QBPQ07021 282 aaKnown RBP14.35□□□□□ -0.11
LINC02208-202ENST00000515704 MYO15BQ96JP2 1530 aa14.35□□□□□ -0.11
LINC02208-202ENST00000515704 ATXN8OSP0DMR3 200 aa14.3□□□□□ -0.12
LINC02208-202ENST00000515704 APLP2Q06481 763 aa14.25□□□□□ -0.13
LINC02208-202ENST00000515704 DCAF8L2P0C7V8 631 aa14.23□□□□□ -0.13
LINC02208-202ENST00000515704 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC02208-202ENST00000515704 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
LINC02208-202ENST00000515704 SPINK5Q9NQ38 1064 aaPredicted RBP14.13□□□□□ -0.15
LINC02208-202ENST00000515704 SHROOM4Q9ULL8 1493 aa14.11□□□□□ -0.15
LINC02208-202ENST00000515704 DCAF1Q9Y4B6 1507 aa14.08□□□□□ -0.16
LINC02208-202ENST00000515704 CAPN15O75808 1086 aa14.06□□□□□ -0.16
LINC02208-202ENST00000515704 CACNB1Q02641 598 aaPredicted RBP14.06□□□□□ -0.16
LINC02208-202ENST00000515704 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
LINC02208-202ENST00000515704 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
LINC02208-202ENST00000515704 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
LINC02208-202ENST00000515704 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
LINC02208-202ENST00000515704 ZCCHC6Q5VYS8 1495 aaKnown RBP13.99□□□□□ -0.17
LINC02208-202ENST00000515704 DSG3P32926 999 aa13.83□□□□□ -0.2
LINC02208-202ENST00000515704 POLA2Q14181 598 aa13.82□□□□□ -0.2
LINC02208-202ENST00000515704 CECR2Q9BXF3 1484 aa13.81□□□□□ -0.2
LINC02208-202ENST00000515704 ABCB7O75027 752 aa13.8□□□□□ -0.2
LINC02208-202ENST00000515704 CC2D2AQ9P2K1 1620 aa13.77□□□□□ -0.21
LINC02208-202ENST00000515704 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
LINC02208-202ENST00000515704 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
LINC02208-202ENST00000515704 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
LINC02208-202ENST00000515704 FBLN2P98095 1184 aa13.57□□□□□ -0.24
LINC02208-202ENST00000515704 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
LINC02208-202ENST00000515704 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
LINC02208-202ENST00000515704 NCAPD3P42695 1498 aa13.39□□□□□ -0.27
LINC02208-202ENST00000515704 FKBP8Q14318 412 aa13.37□□□□□ -0.27
LINC02208-202ENST00000515704 CUX2O14529 1486 aa13.35□□□□□ -0.27
LINC02208-202ENST00000515704 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
LINC02208-202ENST00000515704 SPDYE4A6NLX3 237 aa13.3□□□□□ -0.28
LINC02208-202ENST00000515704 ATAD2BQ9ULI0 1458 aa13.27□□□□□ -0.29
LINC02208-202ENST00000515704 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
LINC02208-202ENST00000515704 HMGXB3Q12766 1538 aa13.24□□□□□ -0.29
LINC02208-202ENST00000515704 SPDYE2BA6NHP3 402 aa13.24□□□□□ -0.29
LINC02208-202ENST00000515704 SPDYE6P0CI01 402 aa13.24□□□□□ -0.29
LINC02208-202ENST00000515704 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
LINC02208-202ENST00000515704 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
LINC02208-202ENST00000515704 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
LINC02208-202ENST00000515704 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
LINC02208-202ENST00000515704 BAZ1AQ9NRL2 1556 aaPredicted RBP13.16□□□□□ -0.3
LINC02208-202ENST00000515704 SMARCA4P51532 1647 aa13.16□□□□□ -0.3
LINC02208-202ENST00000515704 SSUH2Q9Y2M2 353 aa13.15□□□□□ -0.3
LINC02208-202ENST00000515704 PEG3Q9GZU2 1588 aa13.14□□□□□ -0.31
LINC02208-202ENST00000515704 BAZ1BQ9UIG0 1483 aaKnown RBP13.11□□□□□ -0.31
LINC02208-202ENST00000515704 PROM2Q8N271 834 aa13.1□□□□□ -0.31
LINC02208-202ENST00000515704 LAMC3Q9Y6N6 1575 aa13.06□□□□□ -0.32
LINC02208-202ENST00000515704 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
LINC02208-202ENST00000515704 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
LINC02208-202ENST00000515704 NESP48681 1621 aa13.02□□□□□ -0.33
LINC02208-202ENST00000515704 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
LINC02208-202ENST00000515704 THOC2Q8NI27 1593 aaKnown RBP12.95□□□□□ -0.34
LINC02208-202ENST00000515704 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
LINC02208-202ENST00000515704 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
LINC02208-202ENST00000515704 FBXO3Q9UK99 471 aa12.89□□□□□ -0.35
LINC02208-202ENST00000515704 MRC2Q9UBG0 1479 aa12.86□□□□□ -0.35
LINC02208-202ENST00000515704 WDR62O43379 1518 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms