RNA–Protein interactions for RNA: ENST00000515159.5

SLC38A9-222, Transcript of solute carrier family 38 member 9, humanhuman

TSL 2

Gene SLC38A9, Length 3,509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-222ENST00000515159 E9PCH4 1651 aa6.62□□□□□ -1.35
SLC38A9-222ENST00000515159 ANO8Q9HCE9 1232 aaPredicted RBP6.61□□□□□ -1.35
SLC38A9-222ENST00000515159 PRDM2Q13029 1718 aa6.61□□□□□ -1.35
SLC38A9-222ENST00000515159 SMARCA4P51532 1647 aa6.61□□□□□ -1.35
SLC38A9-222ENST00000515159 VPS8Q8N3P4 1428 aa6.61□□□□□ -1.35
SLC38A9-222ENST00000515159 GOLGA3Q08378 1498 aa6.6□□□□□ -1.35
SLC38A9-222ENST00000515159 WDR97A6NE52 1622 aa6.6□□□□□ -1.35
SLC38A9-222ENST00000515159 CEP164Q9UPV0 1460 aa6.6□□□□□ -1.35
SLC38A9-222ENST00000515159 ARAP1Q96P48 1450 aa6.59□□□□□ -1.35
SLC38A9-222ENST00000515159 RNF216Q9NWF9 866 aaPredicted RBP6.59□□□□□ -1.35
SLC38A9-222ENST00000515159 SCRIBQ14160 1630 aa6.59□□□□□ -1.35
SLC38A9-222ENST00000515159 CLIP1P30622 1438 aa6.59□□□□□ -1.36
SLC38A9-222ENST00000515159 LRRIQ1Q96JM4 1722 aa6.58□□□□□ -1.36
SLC38A9-222ENST00000515159 DMRT2Q9Y5R5 561 aa6.58□□□□□ -1.36
SLC38A9-222ENST00000515159 HOXD11P31277 338 aaPredicted RBP6.56□□□□□ -1.36
SLC38A9-222ENST00000515159 TOP2BQ02880 1626 aa6.56□□□□□ -1.36
SLC38A9-222ENST00000515159 CECR2Q9BXF3 1484 aa6.56□□□□□ -1.36
SLC38A9-222ENST00000515159 RUSC2Q8N2Y8 1516 aa6.56□□□□□ -1.36
SLC38A9-222ENST00000515159 RNF123Q5XPI4 1314 aa6.55□□□□□ -1.36
SLC38A9-222ENST00000515159 GCC2Q8IWJ2 1684 aa6.55□□□□□ -1.36
SLC38A9-222ENST00000515159 DAXXQ9UER7 740 aaPredicted RBP6.55□□□□□ -1.36
SLC38A9-222ENST00000515159 SALL2Q9Y467 1007 aaPredicted RBP6.54□□□□□ -1.36
SLC38A9-222ENST00000515159 PPP1R15AO75807 674 aaPredicted RBP6.54□□□□□ -1.36
SLC38A9-222ENST00000515159 HECW1Q76N89 1606 aa6.53□□□□□ -1.36
SLC38A9-222ENST00000515159 CTTNBP2Q8WZ74 1663 aa6.53□□□□□ -1.36
SLC38A9-222ENST00000515159 SOGA1O94964 1423 aa6.52□□□□□ -1.36
SLC38A9-222ENST00000515159 SHROOM2Q13796 1616 aa6.52□□□□□ -1.37
SLC38A9-222ENST00000515159 PRXQ9BXM0 1461 aa6.51□□□□□ -1.37
SLC38A9-222ENST00000515159 DENND4BO75064 1496 aaPredicted RBP6.5□□□□□ -1.37
SLC38A9-222ENST00000515159 TIAM1Q13009 1591 aa6.49□□□□□ -1.37
SLC38A9-222ENST00000515159 CCER1Q8TC90 406 aaPredicted RBP6.49□□□□□ -1.37
SLC38A9-222ENST00000515159 CCER2I3L3R5 266 aa6.49□□□□□ -1.37
SLC38A9-222ENST00000515159 DEKP35659 375 aaKnown RBP6.48□□□□□ -1.37
SLC38A9-222ENST00000515159 SLC4A2P04920 1241 aa6.46□□□□□ -1.37
SLC38A9-222ENST00000515159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.46□□□□□ -1.37
SLC38A9-222ENST00000515159 SLC24A1O60721 1099 aa6.46□□□□□ -1.38
SLC38A9-222ENST00000515159 ARHGEF11O15085 1522 aa6.46□□□□□ -1.38
SLC38A9-222ENST00000515159 ZMYM4Q5VZL5 1548 aa6.46□□□□□ -1.38
SLC38A9-222ENST00000515159 MYOM3Q5VTT5 1437 aa6.45□□□□□ -1.38
SLC38A9-222ENST00000515159 KIF21AQ7Z4S6 1674 aa6.44□□□□□ -1.38
SLC38A9-222ENST00000515159 KCNH8Q96L42 1107 aa6.43□□□□□ -1.38
SLC38A9-222ENST00000515159 FOXD4L1Q9NU39 408 aa6.43□□□□□ -1.38
SLC38A9-222ENST00000515159 RAPGEF2Q9Y4G8 1499 aa6.41□□□□□ -1.38
SLC38A9-222ENST00000515159 PTPN23Q9H3S7 1636 aa6.41□□□□□ -1.38
SLC38A9-222ENST00000515159 FHAD1B1AJZ9 1412 aa6.4□□□□□ -1.38
SLC38A9-222ENST00000515159 MBD5Q9P267 1494 aa6.4□□□□□ -1.38
SLC38A9-222ENST00000515159 BCORL1Q5H9F3 1711 aa6.4□□□□□ -1.39
SLC38A9-222ENST00000515159 SPATA31E1Q6ZUB1 1445 aa6.38□□□□□ -1.39
SLC38A9-222ENST00000515159 PAK3O75914 559 aaPredicted RBP6.38□□□□□ -1.39
SLC38A9-222ENST00000515159 IL27Q8NEV9 243 aa6.38□□□□□ -1.39
SLC38A9-222ENST00000515159 CENPJQ9HC77 1338 aaPredicted RBP6.37□□□□□ -1.39
SLC38A9-222ENST00000515159 NLRP1Q9C000 1473 aa6.37□□□□□ -1.39
SLC38A9-222ENST00000515159 SMG6Q86US8 1419 aaKnown RBP6.37□□□□□ -1.39
SLC38A9-222ENST00000515159 TIMELESSQ9UNS1 1208 aa6.37□□□□□ -1.39
SLC38A9-222ENST00000515159 ARHGAP35Q9NRY4 1499 aa6.37□□□□□ -1.39
SLC38A9-222ENST00000515159 PKNOX2Q96KN3 472 aa6.36□□□□□ -1.39
SLC38A9-222ENST00000515159 USP35Q9P2H5 1018 aa6.35□□□□□ -1.39
SLC38A9-222ENST00000515159 THOC2Q8NI27 1593 aaKnown RBP6.35□□□□□ -1.39
SLC38A9-222ENST00000515159 AQRO60306 1485 aaKnown RBP eCLIP6.35□□□□□ -1.39
SLC38A9-222ENST00000515159 CCDC144AA2RUR9 1427 aa6.35□□□□□ -1.39
SLC38A9-222ENST00000515159 BICRAQ9NZM4 1560 aa6.35□□□□□ -1.39
SLC38A9-222ENST00000515159 LAMC1P11047 1609 aa6.35□□□□□ -1.39
SLC38A9-222ENST00000515159 YTHDC1Q96MU7 727 aaKnown RBP6.34□□□□□ -1.39
SLC38A9-222ENST00000515159 GAPVD1Q14C86 1478 aa6.34□□□□□ -1.39
SLC38A9-222ENST00000515159 KDM5CP41229 1560 aa6.34□□□□□ -1.39
SLC38A9-222ENST00000515159 EIF5BO60841 1220 aaKnown RBP6.34□□□□□ -1.39
SLC38A9-222ENST00000515159 PCF11O94913 1555 aaKnown RBP6.34□□□□□ -1.39
SLC38A9-222ENST00000515159 SAMD9Q5K651 1589 aa6.34□□□□□ -1.39
SLC38A9-222ENST00000515159 NCOA1Q15788 1441 aa6.33□□□□□ -1.4
SLC38A9-222ENST00000515159 PRDM4Q9UKN5 801 aa6.33□□□□□ -1.4
SLC38A9-222ENST00000515159 CLASP1Q7Z460 1538 aa6.33□□□□□ -1.4
SLC38A9-222ENST00000515159 INSRP06213 1382 aa6.33□□□□□ -1.4
SLC38A9-222ENST00000515159 ARHGAP31Q2M1Z3 1444 aa6.32□□□□□ -1.4
SLC38A9-222ENST00000515159 AKNAQ7Z591 1439 aa6.32□□□□□ -1.4
SLC38A9-222ENST00000515159 KIF14Q15058 1648 aa6.32□□□□□ -1.4
SLC38A9-222ENST00000515159 TEX14Q8IWB6 1497 aa6.32□□□□□ -1.4
SLC38A9-222ENST00000515159 CROCC2H7BZ55 1655 aa6.32□□□□□ -1.4
SLC38A9-222ENST00000515159 FKBP8Q14318 412 aa6.32□□□□□ -1.4
SLC38A9-222ENST00000515159 LRRC9Q6ZRR7 1453 aa6.31□□□□□ -1.4
SLC38A9-222ENST00000515159 NOP58Q9Y2X3 529 aaKnown RBP6.31□□□□□ -1.4
SLC38A9-222ENST00000515159 PPRC1Q5VV67 1664 aaKnown RBP6.31□□□□□ -1.4
SLC38A9-222ENST00000515159 TCOF1Q13428 1488 aaKnown RBP6.31□□□□□ -1.4
SLC38A9-222ENST00000515159 SCAPERQ9BY12 1400 aa6.3□□□□□ -1.4
SLC38A9-222ENST00000515159 KDM6BO15054 1643 aa6.3□□□□□ -1.4
SLC38A9-222ENST00000515159 ZNF608Q9ULD9 1512 aaPredicted RBP6.3□□□□□ -1.4
SLC38A9-222ENST00000515159 RAB3GAP2Q9H2M9 1393 aa6.3□□□□□ -1.4
SLC38A9-222ENST00000515159 CEP170Q5SW79 1584 aa6.29□□□□□ -1.4
SLC38A9-222ENST00000515159 CNTLNQ9NXG0 1405 aa6.29□□□□□ -1.4
SLC38A9-222ENST00000515159 CCDC136Q96JN2 1154 aa6.29□□□□□ -1.4
SLC38A9-222ENST00000515159 SNAPC4Q5SXM2 1469 aa6.29□□□□□ -1.4
SLC38A9-222ENST00000515159 FAM43AQ8N2R8 423 aa6.29□□□□□ -1.4
SLC38A9-222ENST00000515159 ARHGEF12Q9NZN5 1544 aa6.28□□□□□ -1.4
SLC38A9-222ENST00000515159 IPO9Q96P70 1041 aaKnown RBP6.28□□□□□ -1.4
SLC38A9-222ENST00000515159 LRPPRCP42704 1394 aaKnown RBP6.28□□□□□ -1.4
SLC38A9-222ENST00000515159 CCNB3Q8WWL7 1395 aa6.28□□□□□ -1.4
SLC38A9-222ENST00000515159 PLXNC1O60486 1568 aa6.28□□□□□ -1.4
SLC38A9-222ENST00000515159 CUX1P39880 1505 aa6.27□□□□□ -1.4
SLC38A9-222ENST00000515159 DHX29Q7Z478 1369 aaKnown RBP6.27□□□□□ -1.41
SLC38A9-222ENST00000515159 HFM1A2PYH4 1435 aa6.27□□□□□ -1.41
SLC38A9-222ENST00000515159 PPP4R2Q9NY27 417 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms