RNA–Protein interactions for RNA: ENST00000515159.5

SLC38A9-222, Transcript of solute carrier family 38 member 9, human

TSL 2

Gene SLC38A9, Length 3,509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-222	ENST00000515159	AEBP2	Q6ZN18	517 aa	Predicted RBP	9.79	□□□□□ -0.84
SLC38A9-222	ENST00000515159	CHIC1	Q5VXU3	224 aa		9.69	□□□□□ -0.86
SLC38A9-222	ENST00000515159	NISCH	Q9Y2I1	1504 aa		8.69	□□□□□ -1.02
SLC38A9-222	ENST00000515159	PHF23	Q9BUL5	403 aa	Predicted RBP	8.65	□□□□□ -1.02
SLC38A9-222	ENST00000515159	MYO15B	Q96JP2	1530 aa		8.11	□□□□□ -1.11
SLC38A9-222	ENST00000515159	SENP3	Q9H4L4	574 aa	Predicted RBP	8.09	□□□□□ -1.11
SLC38A9-222	ENST00000515159	PELP1	Q8IZL8	1130 aa	Known RBP	8.02	□□□□□ -1.13
SLC38A9-222	ENST00000515159	HRC	P23327	699 aa		8	□□□□□ -1.13
SLC38A9-222	ENST00000515159	CCDC180	Q9P1Z9	1646 aa		7.99	□□□□□ -1.13
SLC38A9-222	ENST00000515159	DCAF1	Q9Y4B6	1507 aa		7.9	□□□□□ -1.15
SLC38A9-222	ENST00000515159	PLPPR3	Q6T4P5	718 aa		7.87	□□□□□ -1.15
SLC38A9-222	ENST00000515159	MYT1	Q01538	1121 aa		7.78	□□□□□ -1.16
SLC38A9-222	ENST00000515159	SCAF1	Q9H7N4	1312 aa	Known RBP	7.68	□□□□□ -1.18
SLC38A9-222	ENST00000515159	TTBK1	Q5TCY1	1321 aa	Predicted RBP	7.61	□□□□□ -1.19
SLC38A9-222	ENST00000515159	ZCCHC6	Q5VYS8	1495 aa	Known RBP	7.6	□□□□□ -1.19
SLC38A9-222	ENST00000515159	FOXD1	Q16676	465 aa		7.58	□□□□□ -1.2
SLC38A9-222	ENST00000515159	PPP6R1	Q9UPN7	881 aa		7.53	□□□□□ -1.2
SLC38A9-222	ENST00000515159	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.51	□□□□□ -1.21
SLC38A9-222	ENST00000515159	ADRA2B	P18089	450 aa		7.49	□□□□□ -1.21
SLC38A9-222	ENST00000515159	EIF4G1	Q04637	1599 aa	Known RBP	7.45	□□□□□ -1.22
SLC38A9-222	ENST00000515159	ABCC9	O60706	1549 aa		7.35	□□□□□ -1.23
SLC38A9-222	ENST00000515159	ACIN1	Q9UKV3	1341 aa	Known RBP	7.33	□□□□□ -1.24
SLC38A9-222	ENST00000515159	POTED	Q86YR6	584 aa		7.33	□□□□□ -1.24
SLC38A9-222	ENST00000515159	APLP2	Q06481	763 aa		7.3	□□□□□ -1.24
SLC38A9-222	ENST00000515159	ZEB1	P37275	1124 aa	Predicted RBP	7.26	□□□□□ -1.25
SLC38A9-222	ENST00000515159	NEUROD1	Q13562	356 aa		7.25	□□□□□ -1.25
SLC38A9-222	ENST00000515159	TRIM26	Q12899	539 aa	Predicted RBP	7.25	□□□□□ -1.25
SLC38A9-222	ENST00000515159	PRKCSH	P14314	528 aa	Predicted RBP	7.23	□□□□□ -1.25
SLC38A9-222	ENST00000515159	PCGF6	Q9BYE7	350 aa		7.23	□□□□□ -1.25
SLC38A9-222	ENST00000515159	FAM9A	Q8IZU1	332 aa	Predicted RBP	7.21	□□□□□ -1.26
SLC38A9-222	ENST00000515159	WRN	Q14191	1432 aa	Predicted RBP eCLIP	7.2	□□□□□ -1.26
SLC38A9-222	ENST00000515159	TRIM41	Q8WV44	630 aa		7.18	□□□□□ -1.26
SLC38A9-222	ENST00000515159	BCL11A	Q9H165	835 aa		7.18	□□□□□ -1.26
SLC38A9-222	ENST00000515159	KCNA4	P22459	653 aa		7.13	□□□□□ -1.27
SLC38A9-222	ENST00000515159	RB1CC1	Q8TDY2	1594 aa		7.13	□□□□□ -1.27
SLC38A9-222	ENST00000515159	PIAS4	Q8N2W9	510 aa	Predicted RBP	7.07	□□□□□ -1.28
SLC38A9-222	ENST00000515159	NACAD	O15069	1562 aa		7.07	□□□□□ -1.28
SLC38A9-222	ENST00000515159	GTF3C3	Q9Y5Q9	886 aa		7.07	□□□□□ -1.28
SLC38A9-222	ENST00000515159	CLSPN	Q9HAW4	1339 aa		7.07	□□□□□ -1.28
SLC38A9-222	ENST00000515159	ANP32E	Q9BTT0	268 aa		7.05	□□□□□ -1.28
SLC38A9-222	ENST00000515159	CUX2	O14529	1486 aa		7.02	□□□□□ -1.29
SLC38A9-222	ENST00000515159	PPP4R3CP	Q6ZMV5	832 aa		6.98	□□□□□ -1.29
SLC38A9-222	ENST00000515159	CENPB	P07199	599 aa	Predicted RBP	6.98	□□□□□ -1.29
SLC38A9-222	ENST00000515159	TSHZ2	Q9NRE2	1034 aa		6.97	□□□□□ -1.29
SLC38A9-222	ENST00000515159	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	6.96	□□□□□ -1.3
SLC38A9-222	ENST00000515159	RSF1	Q96T23	1441 aa	Predicted RBP	6.93	□□□□□ -1.3
SLC38A9-222	ENST00000515159	CSRNP3	Q8WYN3	585 aa		6.92	□□□□□ -1.3
SLC38A9-222	ENST00000515159	KIF21B	O75037	1637 aa		6.92	□□□□□ -1.3
SLC38A9-222	ENST00000515159	POLR1A	O95602	1720 aa	Predicted RBP	6.9	□□□□□ -1.3
SLC38A9-222	ENST00000515159	LOC105371045	A0A1W2PR82	267 aa		6.9	□□□□□ -1.3
SLC38A9-222	ENST00000515159	NCAPD3	P42695	1498 aa		6.89	□□□□□ -1.31
SLC38A9-222	ENST00000515159	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.89	□□□□□ -1.31
SLC38A9-222	ENST00000515159	ERICH6	Q7L0X2	663 aa		6.87	□□□□□ -1.31
SLC38A9-222	ENST00000515159	SHROOM4	Q9ULL8	1493 aa		6.86	□□□□□ -1.31
SLC38A9-222	ENST00000515159	DIEXF	Q68CQ4	756 aa	Known RBP	6.86	□□□□□ -1.31
SLC38A9-222	ENST00000515159	PEG3	Q9GZU2	1588 aa		6.85	□□□□□ -1.31
SLC38A9-222	ENST00000515159	MSH5	O43196	834 aa		6.83	□□□□□ -1.32
SLC38A9-222	ENST00000515159	NPM3	O75607	178 aa	Known RBP	6.83	□□□□□ -1.32
SLC38A9-222	ENST00000515159	SYNJ1	O43426	1573 aa		6.83	□□□□□ -1.32
SLC38A9-222	ENST00000515159	SMARCA2	P51531	1590 aa		6.82	□□□□□ -1.32
SLC38A9-222	ENST00000515159	UBE2Q2	Q8WVN8	375 aa		6.81	□□□□□ -1.32
SLC38A9-222	ENST00000515159	ABCA5	Q8WWZ7	1642 aa		6.81	□□□□□ -1.32
SLC38A9-222	ENST00000515159	FANCI	Q9NVI1	1328 aa		6.8	□□□□□ -1.32
SLC38A9-222	ENST00000515159	MAPKBP1	O60336	1514 aa		6.8	□□□□□ -1.32
SLC38A9-222	ENST00000515159	KDM5B	Q9UGL1	1544 aa		6.8	□□□□□ -1.32
SLC38A9-222	ENST00000515159	ZNF316	A6NFI3	1004 aa	Predicted RBP	6.79	□□□□□ -1.32
SLC38A9-222	ENST00000515159	WIZ	O95785	1651 aa		6.78	□□□□□ -1.32
SLC38A9-222	ENST00000515159	SUPT5H	O00267	1087 aa	Known RBP	6.78	□□□□□ -1.32
SLC38A9-222	ENST00000515159	VIRMA	Q69YN4	1812 aa	Known RBP	6.77	□□□□□ -1.33
SLC38A9-222	ENST00000515159	DNAJC5B	Q9UF47	199 aa		6.76	□□□□□ -1.33
SLC38A9-222	ENST00000515159	TNIK	Q9UKE5	1360 aa		6.75	□□□□□ -1.33
SLC38A9-222	ENST00000515159	MIER1	Q8N108	512 aa		6.75	□□□□□ -1.33
SLC38A9-222	ENST00000515159	NCBP3	Q53F19	620 aa	Known RBP	6.74	□□□□□ -1.33
SLC38A9-222	ENST00000515159	EHMT2	Q96KQ7	1210 aa		6.74	□□□□□ -1.33
SLC38A9-222	ENST00000515159	CNKSR2	Q8WXI2	1034 aa		6.73	□□□□□ -1.33
SLC38A9-222	ENST00000515159	TOP2A	P11388	1531 aa	Known RBP	6.73	□□□□□ -1.33
SLC38A9-222	ENST00000515159	BAZ1B	Q9UIG0	1483 aa	Known RBP	6.73	□□□□□ -1.33
SLC38A9-222	ENST00000515159	ERICH6B	Q5W0A0	696 aa		6.73	□□□□□ -1.33
SLC38A9-222	ENST00000515159	ABCC8	Q09428	1581 aa		6.73	□□□□□ -1.33
SLC38A9-222	ENST00000515159	CEP162	Q5TB80	1403 aa		6.72	□□□□□ -1.33
SLC38A9-222	ENST00000515159	SLC4A1AP	Q9BWU0	796 aa	Known RBP	6.72	□□□□□ -1.33
SLC38A9-222	ENST00000515159	MROH2B	Q7Z745	1585 aa		6.71	□□□□□ -1.33
SLC38A9-222	ENST00000515159	MAPK8IP2	Q13387	824 aa	Predicted RBP	6.71	□□□□□ -1.34
SLC38A9-222	ENST00000515159	BIVM-ERCC5	R4GMW8	1640 aa		6.71	□□□□□ -1.34
SLC38A9-222	ENST00000515159	EEA1	Q15075	1411 aa		6.71	□□□□□ -1.34
SLC38A9-222	ENST00000515159	RRBP1	Q9P2E9	1410 aa	Known RBP	6.71	□□□□□ -1.34
SLC38A9-222	ENST00000515159	CFAP43	Q8NDM7	1665 aa		6.7	□□□□□ -1.34
SLC38A9-222	ENST00000515159	UNC13A	Q9UPW8	1703 aa		6.7	□□□□□ -1.34
SLC38A9-222	ENST00000515159	DHX57	Q6P158	1386 aa	Known RBP	6.68	□□□□□ -1.34
SLC38A9-222	ENST00000515159	ZBTB22	O15209	634 aa		6.68	□□□□□ -1.34
SLC38A9-222	ENST00000515159	MAP3K1	Q13233	1512 aa		6.68	□□□□□ -1.34
SLC38A9-222	ENST00000515159	C11orf95	C9JLR9	678 aa	Predicted RBP	6.66	□□□□□ -1.34
SLC38A9-222	ENST00000515159	MYT1L	Q9UL68	1186 aa		6.66	□□□□□ -1.34
SLC38A9-222	ENST00000515159	ERICH3	Q5RHP9	1530 aa		6.66	□□□□□ -1.34
SLC38A9-222	ENST00000515159	RBM19	Q9Y4C8	960 aa	Known RBP	6.65	□□□□□ -1.34
SLC38A9-222	ENST00000515159	WASHC2A	Q641Q2	1341 aa		6.65	□□□□□ -1.35
SLC38A9-222	ENST00000515159	CCDC88B	A6NC98	1476 aa		6.64	□□□□□ -1.35
SLC38A9-222	ENST00000515159	NCOA2	Q15596	1464 aa		6.63	□□□□□ -1.35
SLC38A9-222	ENST00000515159	WASHC2C	Q9Y4E1	1318 aa		6.63	□□□□□ -1.35
SLC38A9-222	ENST00000515159	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms