RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 FBLN2P98095 1184 aa10.18□□□□□ -0.78
LDB2-216ENST00000515064 AQRO60306 1485 aaKnown RBP eCLIP10.18□□□□□ -0.78
LDB2-216ENST00000515064 RIMBP3CA6NJZ7 1639 aa10.18□□□□□ -0.78
LDB2-216ENST00000515064 RIMBP3BA6NNM3 1639 aa10.18□□□□□ -0.78
LDB2-216ENST00000515064 RIMBP3Q9UFD9 1639 aa10.18□□□□□ -0.78
LDB2-216ENST00000515064 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.17□□□□□ -0.78
LDB2-216ENST00000515064 IFT140Q96RY7 1462 aa10.16□□□□□ -0.78
LDB2-216ENST00000515064 CYB5RLQ6IPT4 315 aa10.16□□□□□ -0.78
LDB2-216ENST00000515064 EIF4G3O43432 1585 aaKnown RBP10.16□□□□□ -0.78
LDB2-216ENST00000515064 ITGAEP38570 1179 aa10.15□□□□□ -0.78
LDB2-216ENST00000515064 PKNOX2Q96KN3 472 aa10.15□□□□□ -0.78
LDB2-216ENST00000515064 ARHGEF11O15085 1522 aa10.14□□□□□ -0.79
LDB2-216ENST00000515064 RAD54L2Q9Y4B4 1467 aa10.13□□□□□ -0.79
LDB2-216ENST00000515064 CDK11AQ9UQ88 783 aaPredicted RBP10.12□□□□□ -0.79
LDB2-216ENST00000515064 TDRD9Q8NDG6 1382 aaKnown RBP10.12□□□□□ -0.79
LDB2-216ENST00000515064 POLA1P09884 1462 aaPredicted RBP10.12□□□□□ -0.79
LDB2-216ENST00000515064 DNMBPQ6XZF7 1577 aa10.11□□□□□ -0.79
LDB2-216ENST00000515064 CHD1O14646 1710 aa10.11□□□□□ -0.79
LDB2-216ENST00000515064 TARBP1Q13395 1621 aaKnown RBP10.11□□□□□ -0.79
LDB2-216ENST00000515064 NBR1Q14596 966 aa10.1□□□□□ -0.79
LDB2-216ENST00000515064 RTN4Q9NQC3 1192 aaKnown RBP10.09□□□□□ -0.79
LDB2-216ENST00000515064 IL27Q8NEV9 243 aa10.08□□□□□ -0.8
LDB2-216ENST00000515064 RTL5Q5HYW3 569 aaPredicted RBP10.07□□□□□ -0.8
LDB2-216ENST00000515064 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
LDB2-216ENST00000515064 TRHP20396 242 aaPredicted RBP10.07□□□□□ -0.8
LDB2-216ENST00000515064 WRNQ14191 1432 aaPredicted RBP eCLIP10.06□□□□□ -0.8
LDB2-216ENST00000515064 SOGA1O94964 1423 aa10.05□□□□□ -0.8
LDB2-216ENST00000515064 ABCC8Q09428 1581 aa10.05□□□□□ -0.8
LDB2-216ENST00000515064 ARAP1Q96P48 1450 aa10.05□□□□□ -0.8
LDB2-216ENST00000515064 NOP58Q9Y2X3 529 aaKnown RBP10.04□□□□□ -0.8
LDB2-216ENST00000515064 FGD5Q6ZNL6 1462 aa10.04□□□□□ -0.8
LDB2-216ENST00000515064 SNAPC4Q5SXM2 1469 aa10.03□□□□□ -0.8
LDB2-216ENST00000515064 CUX1P39880 1505 aa10.02□□□□□ -0.8
LDB2-216ENST00000515064 CHMP7Q8WUX9 453 aaPredicted RBP10.01□□□□□ -0.81
LDB2-216ENST00000515064 KCNH8Q96L42 1107 aa10□□□□□ -0.81
LDB2-216ENST00000515064 PODXL2Q9NZ53 605 aa10□□□□□ -0.81
LDB2-216ENST00000515064 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
LDB2-216ENST00000515064 PLEKHG5O94827 1062 aa9.99□□□□□ -0.81
LDB2-216ENST00000515064 GLIPR1L2Q4G1C9 344 aa9.96□□□□□ -0.81
LDB2-216ENST00000515064 CLASP1Q7Z460 1538 aa9.94□□□□□ -0.82
LDB2-216ENST00000515064 GRIN2BQ13224 1484 aa9.93□□□□□ -0.82
LDB2-216ENST00000515064 GAPVD1Q14C86 1478 aa9.92□□□□□ -0.82
LDB2-216ENST00000515064 PAK3O75914 559 aaPredicted RBP9.92□□□□□ -0.82
LDB2-216ENST00000515064 CEP162Q5TB80 1403 aa9.92□□□□□ -0.82
LDB2-216ENST00000515064 SYNJ2O15056 1496 aa9.92□□□□□ -0.82
LDB2-216ENST00000515064 MAGI1Q96QZ7 1491 aaPredicted RBP9.92□□□□□ -0.82
LDB2-216ENST00000515064 WDR97A6NE52 1622 aa9.91□□□□□ -0.82
LDB2-216ENST00000515064 PBRM1Q86U86 1689 aa9.91□□□□□ -0.82
LDB2-216ENST00000515064 SYNJ1O43426 1573 aa9.9□□□□□ -0.82
LDB2-216ENST00000515064 ERCC6L2Q5T890 1561 aa9.9□□□□□ -0.82
LDB2-216ENST00000515064 TRIM52Q96A61 297 aa9.9□□□□□ -0.82
LDB2-216ENST00000515064 C11orf95C9JLR9 678 aaPredicted RBP9.88□□□□□ -0.83
LDB2-216ENST00000515064 ANP32AP39687 249 aaKnown RBP9.88□□□□□ -0.83
LDB2-216ENST00000515064 RSPH6AQ9H0K4 717 aa9.88□□□□□ -0.83
LDB2-216ENST00000515064 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
LDB2-216ENST00000515064 ABCA10Q8WWZ4 1543 aa9.86□□□□□ -0.83
LDB2-216ENST00000515064 ABCA5Q8WWZ7 1642 aa9.86□□□□□ -0.83
LDB2-216ENST00000515064 IRX6P78412 446 aaPredicted RBP9.85□□□□□ -0.83
LDB2-216ENST00000515064 IPO9Q96P70 1041 aaKnown RBP9.85□□□□□ -0.83
LDB2-216ENST00000515064 PPP4R2Q9NY27 417 aa9.85□□□□□ -0.83
LDB2-216ENST00000515064 TIMELESSQ9UNS1 1208 aa9.84□□□□□ -0.83
LDB2-216ENST00000515064 WASHC2AQ641Q2 1341 aa9.84□□□□□ -0.83
LDB2-216ENST00000515064 ZMYND15Q9H091 742 aa9.83□□□□□ -0.84
LDB2-216ENST00000515064 GRIN2AQ12879 1464 aa9.83□□□□□ -0.84
LDB2-216ENST00000515064 CEP170Q5SW79 1584 aa9.83□□□□□ -0.84
LDB2-216ENST00000515064 CCER2I3L3R5 266 aa9.82□□□□□ -0.84
LDB2-216ENST00000515064 VSIG10Q8N0Z9 540 aa9.82□□□□□ -0.84
LDB2-216ENST00000515064 USP35Q9P2H5 1018 aa9.82□□□□□ -0.84
LDB2-216ENST00000515064 DHX57Q6P158 1386 aaKnown RBP9.81□□□□□ -0.84
LDB2-216ENST00000515064 WASHC2CQ9Y4E1 1318 aa9.81□□□□□ -0.84
LDB2-216ENST00000515064 BRPF3Q9ULD4 1205 aa9.81□□□□□ -0.84
LDB2-216ENST00000515064 TNIKQ9UKE5 1360 aa9.8□□□□□ -0.84
LDB2-216ENST00000515064 ADAMTS12P58397 1594 aa9.8□□□□□ -0.84
LDB2-216ENST00000515064 NEFMP07197 916 aa9.8□□□□□ -0.84
LDB2-216ENST00000515064 DDX10Q13206 875 aaKnown RBP9.79□□□□□ -0.84
LDB2-216ENST00000515064 TOP2BQ02880 1626 aa9.79□□□□□ -0.84
LDB2-216ENST00000515064 ANP32CO43423 234 aa9.79□□□□□ -0.84
LDB2-216ENST00000515064 NUP160Q12769 1436 aa9.78□□□□□ -0.84
LDB2-216ENST00000515064 BIVM-ERCC5R4GMW8 1640 aa9.77□□□□□ -0.85
LDB2-216ENST00000515064 FHAD1B1AJZ9 1412 aa9.76□□□□□ -0.85
LDB2-216ENST00000515064 B4GALNT3Q6L9W6 998 aa9.75□□□□□ -0.85
LDB2-216ENST00000515064 PRG4Q92954 1404 aaPredicted RBP9.75□□□□□ -0.85
LDB2-216ENST00000515064 JPH4Q96JJ6 628 aa9.73□□□□□ -0.85
LDB2-216ENST00000515064 EEA1Q15075 1411 aa9.73□□□□□ -0.85
LDB2-216ENST00000515064 PPM1GO15355 546 aaPredicted RBP9.72□□□□□ -0.85
LDB2-216ENST00000515064 UBTFP17480 764 aaKnown RBP9.72□□□□□ -0.85
LDB2-216ENST00000515064 HNRNPUQ00839 825 aaKnown RBP eCLIP9.72□□□□□ -0.85
LDB2-216ENST00000515064 SHROOM2Q13796 1616 aa9.72□□□□□ -0.85
LDB2-216ENST00000515064 FAM43AQ8N2R8 423 aa9.72□□□□□ -0.85
LDB2-216ENST00000515064 LAS1LQ9Y4W2 734 aaKnown RBP9.72□□□□□ -0.85
LDB2-216ENST00000515064 ERICH3Q5RHP9 1530 aa9.71□□□□□ -0.85
LDB2-216ENST00000515064 GSE1Q14687 1217 aa9.71□□□□□ -0.86
LDB2-216ENST00000515064 PPP1R15AO75807 674 aaPredicted RBP9.7□□□□□ -0.86
LDB2-216ENST00000515064 KIF13AQ9H1H9 1805 aa9.7□□□□□ -0.86
LDB2-216ENST00000515064 FAM69CQ0P6D2 419 aa9.68□□□□□ -0.86
LDB2-216ENST00000515064 RUSC2Q8N2Y8 1516 aa9.68□□□□□ -0.86
LDB2-216ENST00000515064 A0A0U1RQG5 324 aaPredicted RBP9.66□□□□□ -0.86
LDB2-216ENST00000515064 HSP90AA2PQ14568 343 aaPredicted RBP9.66□□□□□ -0.86
LDB2-216ENST00000515064 IGF1RP08069 1367 aa9.66□□□□□ -0.86
LDB2-216ENST00000515064 RRP9O43818 475 aaKnown RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms