RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMAD1-213ENST00000514778 GRIN2BQ13224 1484 aa12□□□□□ -0.49
SMAD1-213ENST00000514778 GAPVD1Q14C86 1478 aa12□□□□□ -0.49
SMAD1-213ENST00000514778 ABCA5Q8WWZ7 1642 aa11.99□□□□□ -0.49
SMAD1-213ENST00000514778 KIF27Q86VH2 1401 aa11.97□□□□□ -0.49
SMAD1-213ENST00000514778 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
SMAD1-213ENST00000514778 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.49
SMAD1-213ENST00000514778 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.5
SMAD1-213ENST00000514778 DSG3P32926 999 aa11.94□□□□□ -0.5
SMAD1-213ENST00000514778 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
SMAD1-213ENST00000514778 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
SMAD1-213ENST00000514778 SYNJ2O15056 1496 aa11.9□□□□□ -0.5
SMAD1-213ENST00000514778 SNAPC4Q5SXM2 1469 aa11.9□□□□□ -0.5
SMAD1-213ENST00000514778 IGF1RP08069 1367 aa11.9□□□□□ -0.5
SMAD1-213ENST00000514778 FHAD1B1AJZ9 1412 aa11.89□□□□□ -0.51
SMAD1-213ENST00000514778 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
SMAD1-213ENST00000514778 EEA1Q15075 1411 aa11.88□□□□□ -0.51
SMAD1-213ENST00000514778 MYCNP04198 464 aaPredicted RBP11.88□□□□□ -0.51
SMAD1-213ENST00000514778 OSCARQ8IYS5 282 aa11.88□□□□□ -0.51
SMAD1-213ENST00000514778 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
SMAD1-213ENST00000514778 CUL7Q14999 1698 aa11.85□□□□□ -0.51
SMAD1-213ENST00000514778 ADAMTS12P58397 1594 aa11.85□□□□□ -0.51
SMAD1-213ENST00000514778 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
SMAD1-213ENST00000514778 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
SMAD1-213ENST00000514778 FBLN2P98095 1184 aa11.82□□□□□ -0.52
SMAD1-213ENST00000514778 DNAJC5Q9H3Z4 198 aa11.82□□□□□ -0.52
SMAD1-213ENST00000514778 CARMIL1Q5VZK9 1371 aa11.81□□□□□ -0.52
SMAD1-213ENST00000514778 RUSC2Q8N2Y8 1516 aa11.81□□□□□ -0.52
SMAD1-213ENST00000514778 CHD1O14646 1710 aa11.8□□□□□ -0.52
SMAD1-213ENST00000514778 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
SMAD1-213ENST00000514778 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
SMAD1-213ENST00000514778 NUP160Q12769 1436 aa11.78□□□□□ -0.52
SMAD1-213ENST00000514778 PRXQ9BXM0 1461 aa11.77□□□□□ -0.52
SMAD1-213ENST00000514778 RAPGEF2Q9Y4G8 1499 aa11.77□□□□□ -0.52
SMAD1-213ENST00000514778 CLASP1Q7Z460 1538 aa11.75□□□□□ -0.53
SMAD1-213ENST00000514778 ABCB7O75027 752 aa11.73□□□□□ -0.53
SMAD1-213ENST00000514778 KIAA0586Q9BVV6 1533 aa11.72□□□□□ -0.53
SMAD1-213ENST00000514778 CEP170Q5SW79 1584 aa11.71□□□□□ -0.53
SMAD1-213ENST00000514778 KIF21BO75037 1637 aa11.68□□□□□ -0.54
SMAD1-213ENST00000514778 SHROOM2Q13796 1616 aa11.67□□□□□ -0.54
SMAD1-213ENST00000514778 FAM9AQ8IZU1 332 aaPredicted RBP11.66□□□□□ -0.54
SMAD1-213ENST00000514778 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
SMAD1-213ENST00000514778 IQGAP2Q13576 1575 aa11.64□□□□□ -0.55
SMAD1-213ENST00000514778 ARHGEF11O15085 1522 aa11.64□□□□□ -0.55
SMAD1-213ENST00000514778 GOLGA3Q08378 1498 aa11.62□□□□□ -0.55
SMAD1-213ENST00000514778 PRG4Q92954 1404 aaPredicted RBP11.6□□□□□ -0.55
SMAD1-213ENST00000514778 UGGT2Q9NYU1 1516 aa11.6□□□□□ -0.55
SMAD1-213ENST00000514778 ZBTB22O15209 634 aa11.6□□□□□ -0.55
SMAD1-213ENST00000514778 RIMBP3CA6NJZ7 1639 aa11.6□□□□□ -0.55
SMAD1-213ENST00000514778 RIMBP3BA6NNM3 1639 aa11.6□□□□□ -0.55
SMAD1-213ENST00000514778 RIMBP3Q9UFD9 1639 aa11.6□□□□□ -0.55
SMAD1-213ENST00000514778 CARMIL2Q6F5E8 1435 aa11.6□□□□□ -0.55
SMAD1-213ENST00000514778 CTTNBP2Q8WZ74 1663 aa11.59□□□□□ -0.55
SMAD1-213ENST00000514778 POLA2Q14181 598 aa11.56□□□□□ -0.56
SMAD1-213ENST00000514778 UBTFP17480 764 aaKnown RBP11.55□□□□□ -0.56
SMAD1-213ENST00000514778 DISP1Q96F81 1524 aa11.55□□□□□ -0.56
SMAD1-213ENST00000514778 ARAP1Q96P48 1450 aa11.54□□□□□ -0.56
SMAD1-213ENST00000514778 TNIKQ9UKE5 1360 aa11.54□□□□□ -0.56
SMAD1-213ENST00000514778 ATF5Q9Y2D1 282 aaPredicted RBP11.52□□□□□ -0.57
SMAD1-213ENST00000514778 ERCC6L2Q5T890 1561 aa11.52□□□□□ -0.57
SMAD1-213ENST00000514778 EFCAB5A4FU69 1503 aa11.51□□□□□ -0.57
SMAD1-213ENST00000514778 KIAA0556O60303 1618 aa11.51□□□□□ -0.57
SMAD1-213ENST00000514778 CYB5RLQ6IPT4 315 aa11.51□□□□□ -0.57
SMAD1-213ENST00000514778 PTPRGP23470 1445 aa11.51□□□□□ -0.57
SMAD1-213ENST00000514778 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
SMAD1-213ENST00000514778 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
SMAD1-213ENST00000514778 UHRF1BP1LA0JNW5 1464 aa11.45□□□□□ -0.58
SMAD1-213ENST00000514778 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
SMAD1-213ENST00000514778 UACAQ9BZF9 1416 aa11.43□□□□□ -0.58
SMAD1-213ENST00000514778 EHMT2Q96KQ7 1210 aa11.42□□□□□ -0.58
SMAD1-213ENST00000514778 ARHGAP35Q9NRY4 1499 aa11.42□□□□□ -0.58
SMAD1-213ENST00000514778 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
SMAD1-213ENST00000514778 FMN1Q68DA7 1419 aa11.41□□□□□ -0.58
SMAD1-213ENST00000514778 ABCC2Q92887 1545 aa11.4□□□□□ -0.58
SMAD1-213ENST00000514778 NPM1P06748 294 aaKnown RBP eCLIP11.4□□□□□ -0.58
SMAD1-213ENST00000514778 CLIP1P30622 1438 aa11.4□□□□□ -0.58
SMAD1-213ENST00000514778 ABCA8O94911 1581 aa11.39□□□□□ -0.59
SMAD1-213ENST00000514778 ADCY10Q96PN6 1610 aa11.38□□□□□ -0.59
SMAD1-213ENST00000514778 FHOD3Q2V2M9 1422 aa11.38□□□□□ -0.59
SMAD1-213ENST00000514778 LOC105371045A0A1W2PR82 267 aa11.38□□□□□ -0.59
SMAD1-213ENST00000514778 RANGAP1P46060 587 aaPredicted RBP11.38□□□□□ -0.59
SMAD1-213ENST00000514778 P3H3Q8IVL6 736 aa11.38□□□□□ -0.59
SMAD1-213ENST00000514778 CEP162Q5TB80 1403 aa11.37□□□□□ -0.59
SMAD1-213ENST00000514778 KDM5BQ9UGL1 1544 aa11.37□□□□□ -0.59
SMAD1-213ENST00000514778 PLB1Q6P1J6 1458 aa11.37□□□□□ -0.59
SMAD1-213ENST00000514778 MAPKBP1O60336 1514 aa11.35□□□□□ -0.59
SMAD1-213ENST00000514778 TTBK1Q5TCY1 1321 aaPredicted RBP11.35□□□□□ -0.59
SMAD1-213ENST00000514778 RAPGEF6Q8TEU7 1601 aa11.34□□□□□ -0.59
SMAD1-213ENST00000514778 POTEHQ6S545 545 aa11.31□□□□□ -0.6
SMAD1-213ENST00000514778 CASKIN1Q8WXD9 1431 aa11.31□□□□□ -0.6
SMAD1-213ENST00000514778 NUP153P49790 1475 aaKnown RBP11.31□□□□□ -0.6
SMAD1-213ENST00000514778 ATP10BO94823 1461 aa11.3□□□□□ -0.6
SMAD1-213ENST00000514778 ZCCHC11Q5TAX3 1644 aaKnown RBP11.29□□□□□ -0.6
SMAD1-213ENST00000514778 HECW1Q76N89 1606 aa11.29□□□□□ -0.6
SMAD1-213ENST00000514778 FYCO1Q9BQS8 1478 aa11.29□□□□□ -0.6
SMAD1-213ENST00000514778 ASXL2Q76L83 1435 aa11.27□□□□□ -0.6
SMAD1-213ENST00000514778 ABCC10Q5T3U5 1492 aa11.27□□□□□ -0.6
SMAD1-213ENST00000514778 CDK11AQ9UQ88 783 aaPredicted RBP11.27□□□□□ -0.61
SMAD1-213ENST00000514778 VPS8Q8N3P4 1428 aa11.26□□□□□ -0.61
SMAD1-213ENST00000514778 CCDC18Q5T9S5 1454 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms