RNA–Protein interactions for RNA: ENST00000513417.5

WDR41-222, Transcript of WD repeat domain 41, human

TSL 4

Gene WDR41, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR41-222	ENST00000513417	SPINK5	Q9NQ38	1064 aa	Predicted RBP	9.3	□□□□□ -0.92
WDR41-222	ENST00000513417	PDS5B	Q9NTI5	1447 aa		9.3	□□□□□ -0.92
WDR41-222	ENST00000513417	FBXO3	Q9UK99	471 aa		9.29	□□□□□ -0.92
WDR41-222	ENST00000513417	UBTF	P17480	764 aa	Known RBP	9.28	□□□□□ -0.92
WDR41-222	ENST00000513417	POLA2	Q14181	598 aa		9.28	□□□□□ -0.92
WDR41-222	ENST00000513417	CEP162	Q5TB80	1403 aa		9.28	□□□□□ -0.92
WDR41-222	ENST00000513417	FANCD2	Q9BXW9	1451 aa		9.27	□□□□□ -0.93
WDR41-222	ENST00000513417	SPDYE4	A6NLX3	237 aa		9.26	□□□□□ -0.93
WDR41-222	ENST00000513417	CUX1	P39880	1505 aa		9.26	□□□□□ -0.93
WDR41-222	ENST00000513417	ZEB1	P37275	1124 aa	Predicted RBP	9.25	□□□□□ -0.93
WDR41-222	ENST00000513417	PRX	Q9BXM0	1461 aa		9.24	□□□□□ -0.93
WDR41-222	ENST00000513417	MKRN4P	Q13434	485 aa	Predicted RBP	9.23	□□□□□ -0.93
WDR41-222	ENST00000513417	PROM2	Q8N271	834 aa		9.23	□□□□□ -0.93
WDR41-222	ENST00000513417	DNMBP	Q6XZF7	1577 aa		9.23	□□□□□ -0.93
WDR41-222	ENST00000513417	PCGF6	Q9BYE7	350 aa		9.22	□□□□□ -0.93
WDR41-222	ENST00000513417	CLIP1	P30622	1438 aa		9.2	□□□□□ -0.94
WDR41-222	ENST00000513417	ABCA10	Q8WWZ4	1543 aa		9.18	□□□□□ -0.94
WDR41-222	ENST00000513417	RUSC2	Q8N2Y8	1516 aa		9.17	□□□□□ -0.94
WDR41-222	ENST00000513417	FGD5	Q6ZNL6	1462 aa		9.17	□□□□□ -0.94
WDR41-222	ENST00000513417	VPS8	Q8N3P4	1428 aa		9.17	□□□□□ -0.94
WDR41-222	ENST00000513417	HRC	P23327	699 aa		9.17	□□□□□ -0.94
WDR41-222	ENST00000513417	CUX2	O14529	1486 aa		9.16	□□□□□ -0.94
WDR41-222	ENST00000513417	RAPGEF2	Q9Y4G8	1499 aa		9.16	□□□□□ -0.94
WDR41-222	ENST00000513417	TOPBP1	Q92547	1522 aa		9.15	□□□□□ -0.94
WDR41-222	ENST00000513417	RTN4	Q9NQC3	1192 aa	Known RBP	9.14	□□□□□ -0.95
WDR41-222	ENST00000513417	CARMIL1	Q5VZK9	1371 aa		9.13	□□□□□ -0.95
WDR41-222	ENST00000513417	WDR97	A6NE52	1622 aa		9.13	□□□□□ -0.95
WDR41-222	ENST00000513417	IGF1R	P08069	1367 aa		9.12	□□□□□ -0.95
WDR41-222	ENST00000513417	DSG3	P32926	999 aa		9.12	□□□□□ -0.95
WDR41-222	ENST00000513417	POLA1	P09884	1462 aa	Predicted RBP	9.12	□□□□□ -0.95
WDR41-222	ENST00000513417	CUL7	Q14999	1698 aa		9.12	□□□□□ -0.95
WDR41-222	ENST00000513417	FHAD1	B1AJZ9	1412 aa		9.1	□□□□□ -0.95
WDR41-222	ENST00000513417	MRC2	Q9UBG0	1479 aa		9.08	□□□□□ -0.96
WDR41-222	ENST00000513417	EFCAB5	A4FU69	1503 aa		9.07	□□□□□ -0.96
WDR41-222	ENST00000513417	MAP3K1	Q13233	1512 aa		9.07	□□□□□ -0.96
WDR41-222	ENST00000513417	SPDYE2B	A6NHP3	402 aa		9.07	□□□□□ -0.96
WDR41-222	ENST00000513417	ABCB7	O75027	752 aa		9.07	□□□□□ -0.96
WDR41-222	ENST00000513417	SPDYE6	P0CI01	402 aa		9.07	□□□□□ -0.96
WDR41-222	ENST00000513417	SPDYE2	Q495Y8	402 aa		9.07	□□□□□ -0.96
WDR41-222	ENST00000513417	URB2	Q14146	1524 aa	Known RBP	9.05	□□□□□ -0.96
WDR41-222	ENST00000513417	NES	P48681	1621 aa		9.05	□□□□□ -0.96
WDR41-222	ENST00000513417	GAPVD1	Q14C86	1478 aa		9.04	□□□□□ -0.96
WDR41-222	ENST00000513417	IFT140	Q96RY7	1462 aa		9.04	□□□□□ -0.96
WDR41-222	ENST00000513417	FMN1	Q68DA7	1419 aa		9.02	□□□□□ -0.97
WDR41-222	ENST00000513417	VASP	P50552	380 aa	Predicted RBP	9.01	□□□□□ -0.97
WDR41-222	ENST00000513417	ABCA5	Q8WWZ7	1642 aa		9.01	□□□□□ -0.97
WDR41-222	ENST00000513417	AQR	O60306	1485 aa	Known RBP eCLIP	9.01	□□□□□ -0.97
WDR41-222	ENST00000513417	WDR62	O43379	1518 aa		9	□□□□□ -0.97
WDR41-222	ENST00000513417	STAG3	Q9UJ98	1225 aa		9	□□□□□ -0.97
WDR41-222	ENST00000513417	ARAP1	Q96P48	1450 aa		9	□□□□□ -0.97
WDR41-222	ENST00000513417	ZNF692	Q9BU19	519 aa	Predicted RBP	8.99	□□□□□ -0.97
WDR41-222	ENST00000513417	GRIN2B	Q13224	1484 aa		8.99	□□□□□ -0.97
WDR41-222	ENST00000513417	ARHGAP35	Q9NRY4	1499 aa		8.99	□□□□□ -0.97
WDR41-222	ENST00000513417	RAD54L2	Q9Y4B4	1467 aa		8.99	□□□□□ -0.97
WDR41-222	ENST00000513417	ERCC6	Q03468	1493 aa		8.98	□□□□□ -0.97
WDR41-222	ENST00000513417	SSUH2	Q9Y2M2	353 aa		8.98	□□□□□ -0.97
WDR41-222	ENST00000513417	FYCO1	Q9BQS8	1478 aa		8.96	□□□□□ -0.97
WDR41-222	ENST00000513417	TARBP1	Q13395	1621 aa	Known RBP	8.96	□□□□□ -0.98
WDR41-222	ENST00000513417	CLSPN	Q9HAW4	1339 aa		8.96	□□□□□ -0.98
WDR41-222	ENST00000513417	THOC2	Q8NI27	1593 aa	Known RBP	8.95	□□□□□ -0.98
WDR41-222	ENST00000513417	KIF21A	Q7Z4S6	1674 aa		8.95	□□□□□ -0.98
WDR41-222	ENST00000513417	ACIN1	Q9UKV3	1341 aa	Known RBP	8.95	□□□□□ -0.98
WDR41-222	ENST00000513417	CASKIN1	Q8WXD9	1431 aa		8.94	□□□□□ -0.98
WDR41-222	ENST00000513417	TDRD9	Q8NDG6	1382 aa	Known RBP	8.93	□□□□□ -0.98
WDR41-222	ENST00000513417	MAGI1	Q96QZ7	1491 aa	Predicted RBP	8.93	□□□□□ -0.98
WDR41-222	ENST00000513417	CTTNBP2	Q8WZ74	1663 aa		8.92	□□□□□ -0.98
WDR41-222	ENST00000513417	RRBP1	Q9P2E9	1410 aa	Known RBP	8.92	□□□□□ -0.98
WDR41-222	ENST00000513417	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	8.92	□□□□□ -0.98
WDR41-222	ENST00000513417	OSCAR	Q8IYS5	282 aa		8.91	□□□□□ -0.98
WDR41-222	ENST00000513417	CCER1	Q8TC90	406 aa	Predicted RBP	8.91	□□□□□ -0.98
WDR41-222	ENST00000513417	CCDC18	Q5T9S5	1454 aa		8.9	□□□□□ -0.98
WDR41-222	ENST00000513417	ADAMTS12	P58397	1594 aa		8.9	□□□□□ -0.99
WDR41-222	ENST00000513417	TIAM1	Q13009	1591 aa		8.9	□□□□□ -0.99
WDR41-222	ENST00000513417	CCNB3	Q8WWL7	1395 aa		8.88	□□□□□ -0.99
WDR41-222	ENST00000513417	SAMD9	Q5K651	1589 aa		8.88	□□□□□ -0.99
WDR41-222	ENST00000513417	SLC24A1	O60721	1099 aa		8.88	□□□□□ -0.99
WDR41-222	ENST00000513417	KIAA0586	Q9BVV6	1533 aa		8.88	□□□□□ -0.99
WDR41-222	ENST00000513417	LRRC9	Q6ZRR7	1453 aa		8.88	□□□□□ -0.99
WDR41-222	ENST00000513417	IQGAP2	Q13576	1575 aa		8.87	□□□□□ -0.99
WDR41-222	ENST00000513417	RANGAP1	P46060	587 aa	Predicted RBP	8.87	□□□□□ -0.99
WDR41-222	ENST00000513417	PBRM1	Q86U86	1689 aa		8.87	□□□□□ -0.99
WDR41-222	ENST00000513417	UGGT2	Q9NYU1	1516 aa		8.86	□□□□□ -0.99
WDR41-222	ENST00000513417	CFAP43	Q8NDM7	1665 aa		8.85	□□□□□ -0.99
WDR41-222	ENST00000513417	SYNJ2	O15056	1496 aa		8.85	□□□□□ -0.99
WDR41-222	ENST00000513417	IFNLR1	Q8IU57	520 aa	Predicted RBP	8.85	□□□□□ -0.99
WDR41-222	ENST00000513417	CARMIL2	Q6F5E8	1435 aa		8.84	□□□□□ -0.99
WDR41-222	ENST00000513417	PPARGC1B	Q86YN6	1023 aa	Known RBP	8.84	□□□□□ -0.99
WDR41-222	ENST00000513417	RBM42	Q9BTD8	480 aa	Known RBP	8.84	□□□□□ -0.99
WDR41-222	ENST00000513417	CDK11A	Q9UQ88	783 aa	Predicted RBP	8.84	□□□□□ -0.99
WDR41-222	ENST00000513417	MTUS2	Q5JR59	1369 aa		8.84	□□□□□ -0.99
WDR41-222	ENST00000513417	GRIN2A	Q12879	1464 aa		8.83	□□□□□ -1
WDR41-222	ENST00000513417	FHOD3	Q2V2M9	1422 aa		8.83	□□□□□ -1
WDR41-222	ENST00000513417	ZBTB47	Q9UFB7	747 aa	Predicted RBP	8.83	□□□□□ -1
WDR41-222	ENST00000513417	HECW1	Q76N89	1606 aa		8.83	□□□□□ -1
WDR41-222	ENST00000513417	EHBP1L1	Q8N3D4	1523 aa		8.82	□□□□□ -1
WDR41-222	ENST00000513417	PLEKHG5	O94827	1062 aa		8.82	□□□□□ -1
WDR41-222	ENST00000513417	CHMP7	Q8WUX9	453 aa	Predicted RBP	8.82	□□□□□ -1
WDR41-222	ENST00000513417	SNAPC4	Q5SXM2	1469 aa		8.82	□□□□□ -1
WDR41-222	ENST00000513417	PCF11	O94913	1555 aa	Known RBP	8.82	□□□□□ -1
WDR41-222	ENST00000513417	EIF4G3	O43432	1585 aa	Known RBP	8.81	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms