RNA–Protein interactions for RNA: ENST00000513417.5

WDR41-222, Transcript of WD repeat domain 41, human

TSL 4

Gene WDR41, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR41-222	ENST00000513417	CHIC1	Q5VXU3	224 aa		15.45	■□□□□ 0.06
WDR41-222	ENST00000513417	AEBP2	Q6ZN18	517 aa	Predicted RBP	15.34	■□□□□ 0.05
WDR41-222	ENST00000513417	PHF23	Q9BUL5	403 aa	Predicted RBP	13.49	□□□□□ -0.25
WDR41-222	ENST00000513417	SENP3	Q9H4L4	574 aa	Predicted RBP	13.18	□□□□□ -0.3
WDR41-222	ENST00000513417	NISCH	Q9Y2I1	1504 aa		12.93	□□□□□ -0.34
WDR41-222	ENST00000513417	PLPPR3	Q6T4P5	718 aa		12.75	□□□□□ -0.37
WDR41-222	ENST00000513417	FOXD1	Q16676	465 aa		12.04	□□□□□ -0.48
WDR41-222	ENST00000513417	ADRA2B	P18089	450 aa		11.76	□□□□□ -0.53
WDR41-222	ENST00000513417	PPP6R1	Q9UPN7	881 aa		11.76	□□□□□ -0.53
WDR41-222	ENST00000513417	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.45	□□□□□ -0.58
WDR41-222	ENST00000513417	CCDC180	Q9P1Z9	1646 aa		11.27	□□□□□ -0.61
WDR41-222	ENST00000513417	KCNA4	P22459	653 aa		11.2	□□□□□ -0.62
WDR41-222	ENST00000513417	MSH5	O43196	834 aa		11.19	□□□□□ -0.62
WDR41-222	ENST00000513417	PPP4R3CP	Q6ZMV5	832 aa		11.19	□□□□□ -0.62
WDR41-222	ENST00000513417	NCBP3	Q53F19	620 aa	Known RBP	11.14	□□□□□ -0.63
WDR41-222	ENST00000513417	SCAF1	Q9H7N4	1312 aa	Known RBP	11.06	□□□□□ -0.64
WDR41-222	ENST00000513417	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.91	□□□□□ -0.66
WDR41-222	ENST00000513417	CNKSR2	Q8WXI2	1034 aa		10.9	□□□□□ -0.66
WDR41-222	ENST00000513417	DCAF1	Q9Y4B6	1507 aa		10.85	□□□□□ -0.67
WDR41-222	ENST00000513417	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.81	□□□□□ -0.68
WDR41-222	ENST00000513417	NPM3	O75607	178 aa	Known RBP	10.8	□□□□□ -0.68
WDR41-222	ENST00000513417	DNAJC5B	Q9UF47	199 aa		10.73	□□□□□ -0.69
WDR41-222	ENST00000513417	MYO15B	Q96JP2	1530 aa		10.71	□□□□□ -0.69
WDR41-222	ENST00000513417	EHMT2	Q96KQ7	1210 aa		10.71	□□□□□ -0.69
WDR41-222	ENST00000513417	RNF216	Q9NWF9	866 aa	Predicted RBP	10.62	□□□□□ -0.71
WDR41-222	ENST00000513417	POTED	Q86YR6	584 aa		10.55	□□□□□ -0.72
WDR41-222	ENST00000513417	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.54	□□□□□ -0.72
WDR41-222	ENST00000513417	DMRT2	Q9Y5R5	561 aa		10.54	□□□□□ -0.72
WDR41-222	ENST00000513417	CSRNP3	Q8WYN3	585 aa		10.53	□□□□□ -0.72
WDR41-222	ENST00000513417	DCAF8L2	P0C7V8	631 aa		10.5	□□□□□ -0.73
WDR41-222	ENST00000513417	NACAD	O15069	1562 aa		10.5	□□□□□ -0.73
WDR41-222	ENST00000513417	HOXD11	P31277	338 aa	Predicted RBP	10.48	□□□□□ -0.73
WDR41-222	ENST00000513417	SHROOM4	Q9ULL8	1493 aa		10.43	□□□□□ -0.74
WDR41-222	ENST00000513417	FOXD4L1	Q9NU39	408 aa		10.35	□□□□□ -0.75
WDR41-222	ENST00000513417	RB1CC1	Q8TDY2	1594 aa		10.35	□□□□□ -0.75
WDR41-222	ENST00000513417	ABCC9	O60706	1549 aa		10.33	□□□□□ -0.76
WDR41-222	ENST00000513417	ZBTB22	O15209	634 aa		10.26	□□□□□ -0.77
WDR41-222	ENST00000513417	SUPT5H	O00267	1087 aa	Known RBP	10.2	□□□□□ -0.78
WDR41-222	ENST00000513417	SCRIB	Q14160	1630 aa		10.19	□□□□□ -0.78
WDR41-222	ENST00000513417	ATXN8OS	P0DMR3	200 aa		10.1	□□□□□ -0.79
WDR41-222	ENST00000513417	SLC4A2	P04920	1241 aa		10.09	□□□□□ -0.79
WDR41-222	ENST00000513417	MYCN	P04198	464 aa	Predicted RBP	10.08	□□□□□ -0.8
WDR41-222	ENST00000513417	RSF1	Q96T23	1441 aa	Predicted RBP	10.06	□□□□□ -0.8
WDR41-222	ENST00000513417	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.05	□□□□□ -0.8
WDR41-222	ENST00000513417	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	9.97	□□□□□ -0.81
WDR41-222	ENST00000513417	HNRNPUL2	Q1KMD3	747 aa	Known RBP	9.97	□□□□□ -0.81
WDR41-222	ENST00000513417	DCAF8L1	A6NGE4	600 aa		9.94	□□□□□ -0.82
WDR41-222	ENST00000513417	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	9.91	□□□□□ -0.82
WDR41-222	ENST00000513417	SAMD1	Q6SPF0	538 aa	Predicted RBP	9.89	□□□□□ -0.83
WDR41-222	ENST00000513417	MROH2B	Q7Z745	1585 aa		9.88	□□□□□ -0.83
WDR41-222	ENST00000513417	CECR2	Q9BXF3	1484 aa		9.88	□□□□□ -0.83
WDR41-222	ENST00000513417	SMARCA4	P51532	1647 aa		9.87	□□□□□ -0.83
WDR41-222	ENST00000513417	PEG3	Q9GZU2	1588 aa		9.84	□□□□□ -0.83
WDR41-222	ENST00000513417	TOP2A	P11388	1531 aa	Known RBP	9.84	□□□□□ -0.83
WDR41-222	ENST00000513417	APLP2	Q06481	763 aa		9.84	□□□□□ -0.83
WDR41-222	ENST00000513417	UNC13A	Q9UPW8	1703 aa		9.84	□□□□□ -0.83
WDR41-222	ENST00000513417	BICRA	Q9NZM4	1560 aa		9.84	□□□□□ -0.83
WDR41-222	ENST00000513417	SMARCA2	P51531	1590 aa		9.81	□□□□□ -0.84
WDR41-222	ENST00000513417	WIZ	O95785	1651 aa		9.76	□□□□□ -0.85
WDR41-222	ENST00000513417		U3KPZ7	1027 aa	Predicted RBP	9.75	□□□□□ -0.85
WDR41-222	ENST00000513417	PABPN1	Q86U42	306 aa	Known RBP eCLIP	9.72	□□□□□ -0.85
WDR41-222	ENST00000513417	TRIM41	Q8WV44	630 aa		9.72	□□□□□ -0.85
WDR41-222	ENST00000513417	ATAD2B	Q9ULI0	1458 aa		9.7	□□□□□ -0.86
WDR41-222	ENST00000513417	BAZ1B	Q9UIG0	1483 aa	Known RBP	9.69	□□□□□ -0.86
WDR41-222	ENST00000513417	HMGXB3	Q12766	1538 aa		9.68	□□□□□ -0.86
WDR41-222	ENST00000513417	CCDC88B	A6NC98	1476 aa		9.66	□□□□□ -0.86
WDR41-222	ENST00000513417	NCAPD3	P42695	1498 aa		9.66	□□□□□ -0.86
WDR41-222	ENST00000513417	EEA1	Q15075	1411 aa		9.65	□□□□□ -0.86
WDR41-222	ENST00000513417	EIF4G1	Q04637	1599 aa	Known RBP	9.62	□□□□□ -0.87
WDR41-222	ENST00000513417	RNF39	Q9H2S5	420 aa		9.56	□□□□□ -0.88
WDR41-222	ENST00000513417	ATF5	Q9Y2D1	282 aa	Predicted RBP	9.56	□□□□□ -0.88
WDR41-222	ENST00000513417	ZNF219	Q9P2Y4	722 aa	Predicted RBP	9.54	□□□□□ -0.88
WDR41-222	ENST00000513417	WRN	Q14191	1432 aa	Predicted RBP eCLIP	9.53	□□□□□ -0.88
WDR41-222	ENST00000513417	C1QBP	Q07021	282 aa	Known RBP	9.51	□□□□□ -0.89
WDR41-222	ENST00000513417	FKBP8	Q14318	412 aa		9.49	□□□□□ -0.89
WDR41-222	ENST00000513417	CFTR	P13569	1480 aa		9.47	□□□□□ -0.89
WDR41-222	ENST00000513417	CACNB1	Q02641	598 aa	Predicted RBP	9.44	□□□□□ -0.9
WDR41-222	ENST00000513417	CADPS	Q9ULU8	1353 aa		9.41	□□□□□ -0.9
WDR41-222	ENST00000513417	TOP2B	Q02880	1626 aa		9.4	□□□□□ -0.9
WDR41-222	ENST00000513417	ABCC8	Q09428	1581 aa		9.4	□□□□□ -0.9
WDR41-222	ENST00000513417	CEP164	Q9UPV0	1460 aa		9.4	□□□□□ -0.91
WDR41-222	ENST00000513417	TNIK	Q9UKE5	1360 aa		9.39	□□□□□ -0.91
WDR41-222	ENST00000513417	GOLGA3	Q08378	1498 aa		9.39	□□□□□ -0.91
WDR41-222	ENST00000513417	LOC105371045	A0A1W2PR82	267 aa		9.38	□□□□□ -0.91
WDR41-222	ENST00000513417	ZBTB12	Q9Y330	459 aa	Predicted RBP	9.38	□□□□□ -0.91
WDR41-222	ENST00000513417	CC2D2A	Q9P2K1	1620 aa		9.38	□□□□□ -0.91
WDR41-222	ENST00000513417	FBLN2	P98095	1184 aa		9.37	□□□□□ -0.91
WDR41-222	ENST00000513417	AMER1	Q5JTC6	1135 aa	Predicted RBP	9.37	□□□□□ -0.91
WDR41-222	ENST00000513417	BIVM-ERCC5	R4GMW8	1640 aa		9.37	□□□□□ -0.91
WDR41-222	ENST00000513417	TRIM26	Q12899	539 aa	Predicted RBP	9.35	□□□□□ -0.91
WDR41-222	ENST00000513417	FAM9A	Q8IZU1	332 aa	Predicted RBP	9.35	□□□□□ -0.91
WDR41-222	ENST00000513417	KIF21B	O75037	1637 aa		9.34	□□□□□ -0.91
WDR41-222	ENST00000513417	PRDM2	Q13029	1718 aa		9.34	□□□□□ -0.91
WDR41-222	ENST00000513417	KIF27	Q86VH2	1401 aa		9.33	□□□□□ -0.92
WDR41-222	ENST00000513417	SYNJ1	O43426	1573 aa		9.33	□□□□□ -0.92
WDR41-222	ENST00000513417	CAPN15	O75808	1086 aa		9.32	□□□□□ -0.92
WDR41-222	ENST00000513417	TRH	P20396	242 aa	Predicted RBP	9.32	□□□□□ -0.92
WDR41-222	ENST00000513417	LAMC3	Q9Y6N6	1575 aa		9.32	□□□□□ -0.92
WDR41-222	ENST00000513417	ERICH3	Q5RHP9	1530 aa		9.31	□□□□□ -0.92
WDR41-222	ENST00000513417	SOGA1	O94964	1423 aa		9.31	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms