RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
SSBP2-216ENST00000512923 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
SSBP2-216ENST00000512923 CUL7Q14999 1698 aa16.65■□□□□ 0.26
SSBP2-216ENST00000512923 FAM9AQ8IZU1 332 aaPredicted RBP16.61■□□□□ 0.25
SSBP2-216ENST00000512923 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
SSBP2-216ENST00000512923 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
SSBP2-216ENST00000512923 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
SSBP2-216ENST00000512923 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
SSBP2-216ENST00000512923 IGF1RP08069 1367 aa16.6■□□□□ 0.25
SSBP2-216ENST00000512923 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
SSBP2-216ENST00000512923 KIF21BO75037 1637 aa16.56■□□□□ 0.24
SSBP2-216ENST00000512923 FHAD1B1AJZ9 1412 aa16.55■□□□□ 0.24
SSBP2-216ENST00000512923 PRXQ9BXM0 1461 aa16.54■□□□□ 0.24
SSBP2-216ENST00000512923 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
SSBP2-216ENST00000512923 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
SSBP2-216ENST00000512923 SYNJ2O15056 1496 aa16.52■□□□□ 0.24
SSBP2-216ENST00000512923 RAPGEF2Q9Y4G8 1499 aa16.51■□□□□ 0.23
SSBP2-216ENST00000512923 CHD1O14646 1710 aa16.5■□□□□ 0.23
SSBP2-216ENST00000512923 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
SSBP2-216ENST00000512923 GRIN2AQ12879 1464 aa16.47■□□□□ 0.23
SSBP2-216ENST00000512923 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
SSBP2-216ENST00000512923 FBLN2P98095 1184 aa16.42■□□□□ 0.22
SSBP2-216ENST00000512923 CTTNBP2Q8WZ74 1663 aa16.41■□□□□ 0.22
SSBP2-216ENST00000512923 CEP170Q5SW79 1584 aa16.37■□□□□ 0.21
SSBP2-216ENST00000512923 NUP160Q12769 1436 aa16.36■□□□□ 0.21
SSBP2-216ENST00000512923 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
SSBP2-216ENST00000512923 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
SSBP2-216ENST00000512923 UBTFP17480 764 aaKnown RBP16.33■□□□□ 0.2
SSBP2-216ENST00000512923 IQGAP2Q13576 1575 aa16.32■□□□□ 0.2
SSBP2-216ENST00000512923 KIAA0586Q9BVV6 1533 aa16.31■□□□□ 0.2
SSBP2-216ENST00000512923 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
SSBP2-216ENST00000512923 LOC105371045A0A1W2PR82 267 aa16.3■□□□□ 0.2
SSBP2-216ENST00000512923 CLASP1Q7Z460 1538 aa16.3■□□□□ 0.2
SSBP2-216ENST00000512923 CAPN15O75808 1086 aa16.27■□□□□ 0.2
SSBP2-216ENST00000512923 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
SSBP2-216ENST00000512923 SHROOM2Q13796 1616 aa16.23■□□□□ 0.19
SSBP2-216ENST00000512923 UGGT2Q9NYU1 1516 aa16.21■□□□□ 0.19
SSBP2-216ENST00000512923 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
SSBP2-216ENST00000512923 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
SSBP2-216ENST00000512923 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
SSBP2-216ENST00000512923 SAMD9Q5K651 1589 aa16.18■□□□□ 0.18
SSBP2-216ENST00000512923 CLIP1P30622 1438 aa16.16■□□□□ 0.18
SSBP2-216ENST00000512923 KIAA0556O60303 1618 aa16.16■□□□□ 0.18
SSBP2-216ENST00000512923 JPH4Q96JJ6 628 aa16.16■□□□□ 0.18
SSBP2-216ENST00000512923 DSG3P32926 999 aa16.14■□□□□ 0.17
SSBP2-216ENST00000512923 RANGAP1P46060 587 aaPredicted RBP16.14■□□□□ 0.17
SSBP2-216ENST00000512923 CARMIL2Q6F5E8 1435 aa16.13■□□□□ 0.17
SSBP2-216ENST00000512923 DISP1Q96F81 1524 aa16.13■□□□□ 0.17
SSBP2-216ENST00000512923 PRG4Q92954 1404 aaPredicted RBP16.13■□□□□ 0.17
SSBP2-216ENST00000512923 ARHGAP35Q9NRY4 1499 aa16.12■□□□□ 0.17
SSBP2-216ENST00000512923 ERCC6L2Q5T890 1561 aa16.08■□□□□ 0.16
SSBP2-216ENST00000512923 TRHP20396 242 aaPredicted RBP16.07■□□□□ 0.16
SSBP2-216ENST00000512923 FHOD3Q2V2M9 1422 aa16.06■□□□□ 0.16
SSBP2-216ENST00000512923 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
SSBP2-216ENST00000512923 ARHGEF11O15085 1522 aa16.04■□□□□ 0.16
SSBP2-216ENST00000512923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
SSBP2-216ENST00000512923 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
SSBP2-216ENST00000512923 P3H3Q8IVL6 736 aa16.03■□□□□ 0.16
SSBP2-216ENST00000512923 RIMBP3CA6NJZ7 1639 aa16.02■□□□□ 0.16
SSBP2-216ENST00000512923 RIMBP3BA6NNM3 1639 aa16.02■□□□□ 0.16
SSBP2-216ENST00000512923 RIMBP3Q9UFD9 1639 aa16.02■□□□□ 0.16
SSBP2-216ENST00000512923 FMN1Q68DA7 1419 aa16.01■□□□□ 0.15
SSBP2-216ENST00000512923 APLP2Q06481 763 aa16.01■□□□□ 0.15
SSBP2-216ENST00000512923 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
SSBP2-216ENST00000512923 ABCB7O75027 752 aa15.98■□□□□ 0.15
SSBP2-216ENST00000512923 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
SSBP2-216ENST00000512923 PTPRGP23470 1445 aa15.98■□□□□ 0.15
SSBP2-216ENST00000512923 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
SSBP2-216ENST00000512923 VPS8Q8N3P4 1428 aa15.97■□□□□ 0.15
SSBP2-216ENST00000512923 PCF11O94913 1555 aaKnown RBP15.95■□□□□ 0.14
SSBP2-216ENST00000512923 RAPGEF6Q8TEU7 1601 aa15.95■□□□□ 0.14
SSBP2-216ENST00000512923 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
SSBP2-216ENST00000512923 HECW1Q76N89 1606 aa15.93■□□□□ 0.14
SSBP2-216ENST00000512923 ABCA8O94911 1581 aa15.93■□□□□ 0.14
SSBP2-216ENST00000512923 FYCO1Q9BQS8 1478 aa15.93■□□□□ 0.14
SSBP2-216ENST00000512923 PLB1Q6P1J6 1458 aa15.91■□□□□ 0.14
SSBP2-216ENST00000512923 CASKIN1Q8WXD9 1431 aa15.91■□□□□ 0.14
SSBP2-216ENST00000512923 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
SSBP2-216ENST00000512923 ABCC2Q92887 1545 aa15.9■□□□□ 0.14
SSBP2-216ENST00000512923 UACAQ9BZF9 1416 aa15.89■□□□□ 0.13
SSBP2-216ENST00000512923 UHRF1BP1LA0JNW5 1464 aa15.88■□□□□ 0.13
SSBP2-216ENST00000512923 DNAJC5Q9H3Z4 198 aa15.87■□□□□ 0.13
SSBP2-216ENST00000512923 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
SSBP2-216ENST00000512923 NUP153P49790 1475 aaKnown RBP15.85■□□□□ 0.13
SSBP2-216ENST00000512923 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
SSBP2-216ENST00000512923 CCDC18Q5T9S5 1454 aa15.85■□□□□ 0.13
SSBP2-216ENST00000512923 CFAP43Q8NDM7 1665 aa15.84■□□□□ 0.13
SSBP2-216ENST00000512923 ATP1B4Q9UN42 357 aaPredicted RBP15.83■□□□□ 0.12
SSBP2-216ENST00000512923 ZBTB22O15209 634 aa15.82■□□□□ 0.12
SSBP2-216ENST00000512923 EPRSP07814 1512 aaKnown RBP15.82■□□□□ 0.12
SSBP2-216ENST00000512923 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
SSBP2-216ENST00000512923 ZCCHC11Q5TAX3 1644 aaKnown RBP15.8■□□□□ 0.12
SSBP2-216ENST00000512923 MAP3K1Q13233 1512 aa15.8■□□□□ 0.12
SSBP2-216ENST00000512923 TIAM1Q13009 1591 aa15.8■□□□□ 0.12
SSBP2-216ENST00000512923 CDK13Q14004 1512 aaKnown RBP15.79■□□□□ 0.12
SSBP2-216ENST00000512923 KDM5BQ9UGL1 1544 aa15.79■□□□□ 0.12
SSBP2-216ENST00000512923 ATP10BO94823 1461 aa15.76■□□□□ 0.11
SSBP2-216ENST00000512923 ARID3CA6NKF2 412 aa15.73■□□□□ 0.11
SSBP2-216ENST00000512923 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
SSBP2-216ENST00000512923 EHBP1L1Q8N3D4 1523 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms