RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 KIF27Q86VH2 1401 aa16.94■□□□□ 0.3
PRDM16-207ENST00000512462 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
PRDM16-207ENST00000512462 CUX2O14529 1486 aa16.92■□□□□ 0.3
PRDM16-207ENST00000512462 CADPSQ9ULU8 1353 aa16.91■□□□□ 0.3
PRDM16-207ENST00000512462 MTUS2Q5JR59 1369 aa16.88■□□□□ 0.29
PRDM16-207ENST00000512462 PRXQ9BXM0 1461 aa16.87■□□□□ 0.29
PRDM16-207ENST00000512462 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
PRDM16-207ENST00000512462 ANP32CO43423 234 aa16.85■□□□□ 0.29
PRDM16-207ENST00000512462 VPS8Q8N3P4 1428 aa16.83■□□□□ 0.29
PRDM16-207ENST00000512462 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.28
PRDM16-207ENST00000512462 TDRD9Q8NDG6 1382 aaKnown RBP16.82■□□□□ 0.28
PRDM16-207ENST00000512462 TONSLQ96HA7 1378 aa16.81■□□□□ 0.28
PRDM16-207ENST00000512462 ERICH6Q7L0X2 663 aa16.75■□□□□ 0.27
PRDM16-207ENST00000512462 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
PRDM16-207ENST00000512462 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
PRDM16-207ENST00000512462 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
PRDM16-207ENST00000512462 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
PRDM16-207ENST00000512462 CCNB3Q8WWL7 1395 aa16.73■□□□□ 0.27
PRDM16-207ENST00000512462 IRX6P78412 446 aaPredicted RBP16.72■□□□□ 0.27
PRDM16-207ENST00000512462 FKBP8Q14318 412 aa16.7■□□□□ 0.26
PRDM16-207ENST00000512462 FOXD1Q16676 465 aa16.7■□□□□ 0.26
PRDM16-207ENST00000512462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
PRDM16-207ENST00000512462 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
PRDM16-207ENST00000512462 KDM2AQ9Y2K7 1162 aa16.7■□□□□ 0.26
PRDM16-207ENST00000512462 FAM9BQ8IZU0 186 aa16.69■□□□□ 0.26
PRDM16-207ENST00000512462 NESP48681 1621 aa16.68■□□□□ 0.26
PRDM16-207ENST00000512462 SALL2Q9Y467 1007 aaPredicted RBP16.68■□□□□ 0.26
PRDM16-207ENST00000512462 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
PRDM16-207ENST00000512462 IGF1RP08069 1367 aa16.68■□□□□ 0.26
PRDM16-207ENST00000512462 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
PRDM16-207ENST00000512462 HNRNPUQ00839 825 aaKnown RBP eCLIP16.67■□□□□ 0.26
PRDM16-207ENST00000512462 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
PRDM16-207ENST00000512462 FHOD3Q2V2M9 1422 aa16.65■□□□□ 0.26
PRDM16-207ENST00000512462 CDK11AQ9UQ88 783 aaPredicted RBP16.64■□□□□ 0.25
PRDM16-207ENST00000512462 KCNH8Q96L42 1107 aa16.62■□□□□ 0.25
PRDM16-207ENST00000512462 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
PRDM16-207ENST00000512462 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
PRDM16-207ENST00000512462 RAB3GAP2Q9H2M9 1393 aa16.6■□□□□ 0.25
PRDM16-207ENST00000512462 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
PRDM16-207ENST00000512462 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.25
PRDM16-207ENST00000512462 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
PRDM16-207ENST00000512462 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
PRDM16-207ENST00000512462 RGL3Q3MIN7 710 aa16.55■□□□□ 0.24
PRDM16-207ENST00000512462 URB2Q14146 1524 aaKnown RBP16.53■□□□□ 0.24
PRDM16-207ENST00000512462 CFDP1Q9UEE9 299 aaPredicted RBP16.51■□□□□ 0.23
PRDM16-207ENST00000512462 DHX57Q6P158 1386 aaKnown RBP16.5■□□□□ 0.23
PRDM16-207ENST00000512462 PDS5BQ9NTI5 1447 aa16.49■□□□□ 0.23
PRDM16-207ENST00000512462 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
PRDM16-207ENST00000512462 MRS2Q9HD23 443 aa16.48■□□□□ 0.23
PRDM16-207ENST00000512462 TSPY4P0CV99 314 aa16.47■□□□□ 0.23
PRDM16-207ENST00000512462 TSPY10P0CW01 314 aa16.47■□□□□ 0.23
PRDM16-207ENST00000512462 CHGAP10645 457 aaKnown RBP16.47■□□□□ 0.23
PRDM16-207ENST00000512462 FHAD1B1AJZ9 1412 aa16.46■□□□□ 0.23
PRDM16-207ENST00000512462 SETD5Q9C0A6 1442 aa16.46■□□□□ 0.23
PRDM16-207ENST00000512462 CUL7Q14999 1698 aa16.45■□□□□ 0.22
PRDM16-207ENST00000512462 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
PRDM16-207ENST00000512462 EIF4G2P78344 907 aaKnown RBP eCLIP16.44■□□□□ 0.22
PRDM16-207ENST00000512462 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
PRDM16-207ENST00000512462 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
PRDM16-207ENST00000512462 ABCA5Q8WWZ7 1642 aa16.4■□□□□ 0.22
PRDM16-207ENST00000512462 PHLDB1Q86UU1 1377 aa16.38■□□□□ 0.21
PRDM16-207ENST00000512462 RRBP1Q9P2E9 1410 aaKnown RBP16.38■□□□□ 0.21
PRDM16-207ENST00000512462 MAP3K1Q13233 1512 aa16.37■□□□□ 0.21
PRDM16-207ENST00000512462 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
PRDM16-207ENST00000512462 TIAM1Q13009 1591 aa16.37■□□□□ 0.21
PRDM16-207ENST00000512462 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
PRDM16-207ENST00000512462 CTTNBP2Q8WZ74 1663 aa16.36■□□□□ 0.21
PRDM16-207ENST00000512462 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
PRDM16-207ENST00000512462 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
PRDM16-207ENST00000512462 EFCAB5A4FU69 1503 aa16.34■□□□□ 0.21
PRDM16-207ENST00000512462 TARBP1Q13395 1621 aaKnown RBP16.33■□□□□ 0.2
PRDM16-207ENST00000512462 TMC1Q8TDI8 760 aa16.33■□□□□ 0.2
PRDM16-207ENST00000512462 ANP32EQ9BTT0 268 aa16.33■□□□□ 0.2
PRDM16-207ENST00000512462 HSPA5P11021 654 aaKnown RBP16.32■□□□□ 0.2
PRDM16-207ENST00000512462 ZNF644Q9H582 1327 aaPredicted RBP16.32■□□□□ 0.2
PRDM16-207ENST00000512462 PPP1R15AO75807 674 aaPredicted RBP16.32■□□□□ 0.2
PRDM16-207ENST00000512462 PCF11O94913 1555 aaKnown RBP16.32■□□□□ 0.2
PRDM16-207ENST00000512462 AQRO60306 1485 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRDM16-207ENST00000512462 CFAP43Q8NDM7 1665 aa16.29■□□□□ 0.2
PRDM16-207ENST00000512462 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
PRDM16-207ENST00000512462 MPHOSPH9Q99550 1183 aa16.29■□□□□ 0.2
PRDM16-207ENST00000512462 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
PRDM16-207ENST00000512462 CARD11Q9BXL7 1154 aa16.27■□□□□ 0.19
PRDM16-207ENST00000512462 PKD2Q13563 968 aa16.27■□□□□ 0.19
PRDM16-207ENST00000512462 FMN1Q68DA7 1419 aa16.26■□□□□ 0.19
PRDM16-207ENST00000512462 NPM2Q86SE8 214 aaKnown RBP16.26■□□□□ 0.19
PRDM16-207ENST00000512462 MRC2Q9UBG0 1479 aa16.26■□□□□ 0.19
PRDM16-207ENST00000512462 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
PRDM16-207ENST00000512462 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
PRDM16-207ENST00000512462 CASKIN1Q8WXD9 1431 aa16.24■□□□□ 0.19
PRDM16-207ENST00000512462 HNRNPMP52272 730 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRDM16-207ENST00000512462 SAMD9Q5K651 1589 aa16.23■□□□□ 0.19
PRDM16-207ENST00000512462 PBRM1Q86U86 1689 aa16.22■□□□□ 0.19
PRDM16-207ENST00000512462 JPH4Q96JJ6 628 aa16.2■□□□□ 0.18
PRDM16-207ENST00000512462 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
PRDM16-207ENST00000512462 CC2D1BQ5T0F9 858 aaKnown RBP16.16■□□□□ 0.18
PRDM16-207ENST00000512462 WDR62O43379 1518 aa16.16■□□□□ 0.18
PRDM16-207ENST00000512462 ADAMTS12P58397 1594 aa16.16■□□□□ 0.18
PRDM16-207ENST00000512462 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
PRDM16-207ENST00000512462 B4GALNT3Q6L9W6 998 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms