RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 DNMBPQ6XZF7 1577 aa15.02■□□□□ -0
NR1I3-230ENST00000511944 SPDYE4A6NLX3 237 aa15.02■□□□□ -0
NR1I3-230ENST00000511944 SPDYE2BA6NHP3 402 aa14.95□□□□□ -0.02
NR1I3-230ENST00000511944 SPDYE6P0CI01 402 aa14.95□□□□□ -0.02
NR1I3-230ENST00000511944 SPDYE2Q495Y8 402 aa14.95□□□□□ -0.02
NR1I3-230ENST00000511944 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
NR1I3-230ENST00000511944 KIF21AQ7Z4S6 1674 aa14.94□□□□□ -0.02
NR1I3-230ENST00000511944 MRC2Q9UBG0 1479 aa14.93□□□□□ -0.02
NR1I3-230ENST00000511944 ZNF692Q9BU19 519 aaPredicted RBP14.92□□□□□ -0.02
NR1I3-230ENST00000511944 URB2Q14146 1524 aaKnown RBP14.92□□□□□ -0.02
NR1I3-230ENST00000511944 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
NR1I3-230ENST00000511944 FGD5Q6ZNL6 1462 aa14.9□□□□□ -0.02
NR1I3-230ENST00000511944 WDR62O43379 1518 aa14.87□□□□□ -0.03
NR1I3-230ENST00000511944 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
NR1I3-230ENST00000511944 SOGA1O94964 1423 aa14.86□□□□□ -0.03
NR1I3-230ENST00000511944 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
NR1I3-230ENST00000511944 ABCA10Q8WWZ4 1543 aa14.86□□□□□ -0.03
NR1I3-230ENST00000511944 RBM42Q9BTD8 480 aaKnown RBP14.85□□□□□ -0.03
NR1I3-230ENST00000511944 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
NR1I3-230ENST00000511944 PROM2Q8N271 834 aa14.84□□□□□ -0.03
NR1I3-230ENST00000511944 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
NR1I3-230ENST00000511944 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
NR1I3-230ENST00000511944 KIF21BO75037 1637 aa14.81□□□□□ -0.04
NR1I3-230ENST00000511944 CUX2O14529 1486 aa14.77□□□□□ -0.04
NR1I3-230ENST00000511944 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
NR1I3-230ENST00000511944 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
NR1I3-230ENST00000511944 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
NR1I3-230ENST00000511944 TARBP1Q13395 1621 aaKnown RBP14.75□□□□□ -0.05
NR1I3-230ENST00000511944 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
NR1I3-230ENST00000511944 GOLGA3Q08378 1498 aa14.75□□□□□ -0.05
NR1I3-230ENST00000511944 PRXQ9BXM0 1461 aa14.75□□□□□ -0.05
NR1I3-230ENST00000511944 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
NR1I3-230ENST00000511944 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
NR1I3-230ENST00000511944 RAD54L2Q9Y4B4 1467 aa14.71□□□□□ -0.05
NR1I3-230ENST00000511944 CUL7Q14999 1698 aa14.69□□□□□ -0.06
NR1I3-230ENST00000511944 IGF1RP08069 1367 aa14.68□□□□□ -0.06
NR1I3-230ENST00000511944 TNIKQ9UKE5 1360 aa14.68□□□□□ -0.06
NR1I3-230ENST00000511944 REM2Q8IYK8 340 aaPredicted RBP14.66□□□□□ -0.06
NR1I3-230ENST00000511944 GAPVD1Q14C86 1478 aa14.65□□□□□ -0.06
NR1I3-230ENST00000511944 LOC105371045A0A1W2PR82 267 aa14.64□□□□□ -0.07
NR1I3-230ENST00000511944 RAPGEF2Q9Y4G8 1499 aa14.63□□□□□ -0.07
NR1I3-230ENST00000511944 GRIN2BQ13224 1484 aa14.61□□□□□ -0.07
NR1I3-230ENST00000511944 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
NR1I3-230ENST00000511944 TDRD9Q8NDG6 1382 aaKnown RBP14.59□□□□□ -0.07
NR1I3-230ENST00000511944 PBRM1Q86U86 1689 aa14.56□□□□□ -0.08
NR1I3-230ENST00000511944 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
NR1I3-230ENST00000511944 FHAD1B1AJZ9 1412 aa14.55□□□□□ -0.08
NR1I3-230ENST00000511944 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
NR1I3-230ENST00000511944 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
NR1I3-230ENST00000511944 ADAMTS12P58397 1594 aa14.53□□□□□ -0.08
NR1I3-230ENST00000511944 ZNF608Q9ULD9 1512 aaPredicted RBP14.52□□□□□ -0.08
NR1I3-230ENST00000511944 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
NR1I3-230ENST00000511944 AQRO60306 1485 aaKnown RBP eCLIP14.5□□□□□ -0.09
NR1I3-230ENST00000511944 PITPNM1O00562 1244 aa14.5□□□□□ -0.09
NR1I3-230ENST00000511944 SPDYE1Q8NFV5 336 aaPredicted RBP14.48□□□□□ -0.09
NR1I3-230ENST00000511944 CLEC11AQ9Y240 323 aa14.46□□□□□ -0.09
NR1I3-230ENST00000511944 CLIP1P30622 1438 aa14.46□□□□□ -0.09
NR1I3-230ENST00000511944 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
NR1I3-230ENST00000511944 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
NR1I3-230ENST00000511944 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
NR1I3-230ENST00000511944 CTTNBP2Q8WZ74 1663 aa14.43□□□□□ -0.1
NR1I3-230ENST00000511944 EFCAB5A4FU69 1503 aa14.42□□□□□ -0.1
NR1I3-230ENST00000511944 STAG3Q9UJ98 1225 aa14.42□□□□□ -0.1
NR1I3-230ENST00000511944 GRIN2AQ12879 1464 aa14.4□□□□□ -0.1
NR1I3-230ENST00000511944 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
NR1I3-230ENST00000511944 KIAA0586Q9BVV6 1533 aa14.36□□□□□ -0.11
NR1I3-230ENST00000511944 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
NR1I3-230ENST00000511944 NUP160Q12769 1436 aa14.34□□□□□ -0.11
NR1I3-230ENST00000511944 ARHGAP35Q9NRY4 1499 aa14.34□□□□□ -0.11
NR1I3-230ENST00000511944 IQGAP2Q13576 1575 aa14.34□□□□□ -0.11
NR1I3-230ENST00000511944 SAMD9Q5K651 1589 aa14.32□□□□□ -0.12
NR1I3-230ENST00000511944 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
NR1I3-230ENST00000511944 UGGT2Q9NYU1 1516 aa14.31□□□□□ -0.12
NR1I3-230ENST00000511944 PRR29P0C7W0 189 aa14.31□□□□□ -0.12
NR1I3-230ENST00000511944 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
NR1I3-230ENST00000511944 CHMP7Q8WUX9 453 aaPredicted RBP14.29□□□□□ -0.12
NR1I3-230ENST00000511944 CEP170Q5SW79 1584 aa14.27□□□□□ -0.12
NR1I3-230ENST00000511944 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
NR1I3-230ENST00000511944 CREBZFQ9NS37 354 aa14.24□□□□□ -0.13
NR1I3-230ENST00000511944 MAP3K1Q13233 1512 aa14.24□□□□□ -0.13
NR1I3-230ENST00000511944 IFNLR1Q8IU57 520 aaPredicted RBP14.23□□□□□ -0.13
NR1I3-230ENST00000511944 MIER1Q8N108 512 aa14.23□□□□□ -0.13
NR1I3-230ENST00000511944 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.13
NR1I3-230ENST00000511944 FXR2P51116 673 aaKnown RBP eCLIP14.21□□□□□ -0.13
NR1I3-230ENST00000511944 CHD1O14646 1710 aa14.2□□□□□ -0.14
NR1I3-230ENST00000511944 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
NR1I3-230ENST00000511944 KIAA0556O60303 1618 aa14.19□□□□□ -0.14
NR1I3-230ENST00000511944 CARMIL2Q6F5E8 1435 aa14.18□□□□□ -0.14
NR1I3-230ENST00000511944 CASKIN1Q8WXD9 1431 aa14.18□□□□□ -0.14
NR1I3-230ENST00000511944 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
NR1I3-230ENST00000511944 DISP1Q96F81 1524 aa14.17□□□□□ -0.14
NR1I3-230ENST00000511944 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
NR1I3-230ENST00000511944 FHOD3Q2V2M9 1422 aa14.16□□□□□ -0.14
NR1I3-230ENST00000511944 SHROOM2Q13796 1616 aa14.16□□□□□ -0.14
NR1I3-230ENST00000511944 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
NR1I3-230ENST00000511944 PCF11O94913 1555 aaKnown RBP14.13□□□□□ -0.15
NR1I3-230ENST00000511944 RANGAP1P46060 587 aaPredicted RBP14.12□□□□□ -0.15
NR1I3-230ENST00000511944 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
NR1I3-230ENST00000511944 PRKAR2AP13861 404 aaKnown RBP14.11□□□□□ -0.15
NR1I3-230ENST00000511944 JPH4Q96JJ6 628 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms