RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 CFTRP13569 1480 aa12.69□□□□□ -0.38
COPS4-209ENST00000511653 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
COPS4-209ENST00000511653 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
COPS4-209ENST00000511653 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
COPS4-209ENST00000511653 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.39
COPS4-209ENST00000511653 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
COPS4-209ENST00000511653 IFNLR1Q8IU57 520 aaPredicted RBP12.63□□□□□ -0.39
COPS4-209ENST00000511653 SSUH2Q9Y2M2 353 aa12.61□□□□□ -0.39
COPS4-209ENST00000511653 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
COPS4-209ENST00000511653 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
COPS4-209ENST00000511653 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
COPS4-209ENST00000511653 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
COPS4-209ENST00000511653 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
COPS4-209ENST00000511653 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
COPS4-209ENST00000511653 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
COPS4-209ENST00000511653 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
COPS4-209ENST00000511653 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
COPS4-209ENST00000511653 IFT140Q96RY7 1462 aa12.46□□□□□ -0.41
COPS4-209ENST00000511653 EIF4G3O43432 1585 aaKnown RBP12.46□□□□□ -0.41
COPS4-209ENST00000511653 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
COPS4-209ENST00000511653 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
COPS4-209ENST00000511653 CHD1O14646 1710 aa12.41□□□□□ -0.42
COPS4-209ENST00000511653 TARBP1Q13395 1621 aaKnown RBP12.41□□□□□ -0.42
COPS4-209ENST00000511653 ARHGEF11O15085 1522 aa12.4□□□□□ -0.42
COPS4-209ENST00000511653 PKD2Q13563 968 aa12.38□□□□□ -0.43
COPS4-209ENST00000511653 ABCC8Q09428 1581 aa12.37□□□□□ -0.43
COPS4-209ENST00000511653 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
COPS4-209ENST00000511653 AQRO60306 1485 aaKnown RBP eCLIP12.35□□□□□ -0.43
COPS4-209ENST00000511653 POLA1P09884 1462 aaPredicted RBP12.35□□□□□ -0.43
COPS4-209ENST00000511653 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
COPS4-209ENST00000511653 RAD54L2Q9Y4B4 1467 aa12.3□□□□□ -0.44
COPS4-209ENST00000511653 PLCD3Q8N3E9 789 aa12.3□□□□□ -0.44
COPS4-209ENST00000511653 MIER1Q8N108 512 aa12.29□□□□□ -0.44
COPS4-209ENST00000511653 SPOCK2Q92563 424 aa12.28□□□□□ -0.44
COPS4-209ENST00000511653 ARAP1Q96P48 1450 aa12.28□□□□□ -0.44
COPS4-209ENST00000511653 FGD5Q6ZNL6 1462 aa12.26□□□□□ -0.45
COPS4-209ENST00000511653 CUX1P39880 1505 aa12.25□□□□□ -0.45
COPS4-209ENST00000511653 TDRD9Q8NDG6 1382 aaKnown RBP12.25□□□□□ -0.45
COPS4-209ENST00000511653 WDR97A6NE52 1622 aa12.24□□□□□ -0.45
COPS4-209ENST00000511653 CYB5RLQ6IPT4 315 aa12.24□□□□□ -0.45
COPS4-209ENST00000511653 SNAPC4Q5SXM2 1469 aa12.24□□□□□ -0.45
COPS4-209ENST00000511653 SOGA1O94964 1423 aa12.23□□□□□ -0.45
COPS4-209ENST00000511653 CLASP1Q7Z460 1538 aa12.22□□□□□ -0.45
COPS4-209ENST00000511653 PBRM1Q86U86 1689 aa12.2□□□□□ -0.46
COPS4-209ENST00000511653 MAGI1Q96QZ7 1491 aaPredicted RBP12.17□□□□□ -0.46
COPS4-209ENST00000511653 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
COPS4-209ENST00000511653 SYNJ1O43426 1573 aa12.17□□□□□ -0.46
COPS4-209ENST00000511653 GRIN2BQ13224 1484 aa12.16□□□□□ -0.46
COPS4-209ENST00000511653 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
COPS4-209ENST00000511653 ABCA5Q8WWZ7 1642 aa12.14□□□□□ -0.47
COPS4-209ENST00000511653 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
COPS4-209ENST00000511653 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
COPS4-209ENST00000511653 ECM2O94769 699 aaPredicted RBP12.13□□□□□ -0.47
COPS4-209ENST00000511653 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
COPS4-209ENST00000511653 GAPVD1Q14C86 1478 aa12.11□□□□□ -0.47
COPS4-209ENST00000511653 CHMP7Q8WUX9 453 aaPredicted RBP12.11□□□□□ -0.47
COPS4-209ENST00000511653 SPDYE1Q8NFV5 336 aaPredicted RBP12.1□□□□□ -0.47
COPS4-209ENST00000511653 ABCA10Q8WWZ4 1543 aa12.09□□□□□ -0.47
COPS4-209ENST00000511653 RGL2O15211 777 aa12.09□□□□□ -0.47
COPS4-209ENST00000511653 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
COPS4-209ENST00000511653 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
COPS4-209ENST00000511653 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
COPS4-209ENST00000511653 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
COPS4-209ENST00000511653 ADAMTS12P58397 1594 aa12.05□□□□□ -0.48
COPS4-209ENST00000511653 BIVM-ERCC5R4GMW8 1640 aa12.05□□□□□ -0.48
COPS4-209ENST00000511653 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
COPS4-209ENST00000511653 PLCB2Q00722 1185 aa12.03□□□□□ -0.48
COPS4-209ENST00000511653 CEP170Q5SW79 1584 aa12.03□□□□□ -0.48
COPS4-209ENST00000511653 GRIN2AQ12879 1464 aa12.03□□□□□ -0.48
COPS4-209ENST00000511653 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
COPS4-209ENST00000511653 TOP2BQ02880 1626 aa12.02□□□□□ -0.48
COPS4-209ENST00000511653 SUPT5HO00267 1087 aaKnown RBP12.02□□□□□ -0.49
COPS4-209ENST00000511653 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
COPS4-209ENST00000511653 NUBP1P53384 320 aa12.02□□□□□ -0.49
COPS4-209ENST00000511653 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
COPS4-209ENST00000511653 ZBTB47Q9UFB7 747 aaPredicted RBP12□□□□□ -0.49
COPS4-209ENST00000511653 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
COPS4-209ENST00000511653 SHROOM2Q13796 1616 aa11.99□□□□□ -0.49
COPS4-209ENST00000511653 NUP160Q12769 1436 aa11.98□□□□□ -0.49
COPS4-209ENST00000511653 FHAD1B1AJZ9 1412 aa11.94□□□□□ -0.5
COPS4-209ENST00000511653 ERICH3Q5RHP9 1530 aa11.94□□□□□ -0.5
COPS4-209ENST00000511653 RNF25Q96BH1 459 aaPredicted RBP11.93□□□□□ -0.5
COPS4-209ENST00000511653 KIF13AQ9H1H9 1805 aa11.92□□□□□ -0.5
COPS4-209ENST00000511653 RUSC2Q8N2Y8 1516 aa11.89□□□□□ -0.51
COPS4-209ENST00000511653 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
COPS4-209ENST00000511653 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
COPS4-209ENST00000511653 HAP1P54257 671 aaPredicted RBP11.87□□□□□ -0.51
COPS4-209ENST00000511653 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
COPS4-209ENST00000511653 PRG4Q92954 1404 aaPredicted RBP11.86□□□□□ -0.51
COPS4-209ENST00000511653 BBXQ8WY36 941 aaPredicted RBP11.85□□□□□ -0.51
COPS4-209ENST00000511653 GSE1Q14687 1217 aa11.84□□□□□ -0.51
COPS4-209ENST00000511653 CHGAP10645 457 aaKnown RBP11.83□□□□□ -0.52
COPS4-209ENST00000511653 PAXIP1Q6ZW49 1069 aaPredicted RBP11.81□□□□□ -0.52
COPS4-209ENST00000511653 ADCY10Q96PN6 1610 aa11.8□□□□□ -0.52
COPS4-209ENST00000511653 JPH4Q96JJ6 628 aa11.79□□□□□ -0.52
COPS4-209ENST00000511653 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
COPS4-209ENST00000511653 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
COPS4-209ENST00000511653 DIP2BQ9P265 1576 aa11.78□□□□□ -0.52
COPS4-209ENST00000511653 CUL7Q14999 1698 aa11.77□□□□□ -0.52
COPS4-209ENST00000511653 MAPKBP1O60336 1514 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms