RNA–Protein interactions for RNA: ENST00000511171.5

LEMD2-209, Transcript of LEM domain containing 2, humanhuman

TSL 2

Gene LEMD2, Length 4,870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-209ENST00000511171 EIF4G1Q04637 1599 aaKnown RBP17.68■□□□□ 0.42
LEMD2-209ENST00000511171 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
LEMD2-209ENST00000511171 PDS5BQ9NTI5 1447 aa17.67■□□□□ 0.42
LEMD2-209ENST00000511171 ERCC6Q03468 1493 aa17.64■□□□□ 0.41
LEMD2-209ENST00000511171 SYNJ1O43426 1573 aa17.64■□□□□ 0.41
LEMD2-209ENST00000511171 TSPY4P0CV99 314 aa17.64■□□□□ 0.41
LEMD2-209ENST00000511171 TSPY10P0CW01 314 aa17.64■□□□□ 0.41
LEMD2-209ENST00000511171 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
LEMD2-209ENST00000511171 BICRAQ9NZM4 1560 aa17.62■□□□□ 0.41
LEMD2-209ENST00000511171 FHOD3Q2V2M9 1422 aa17.59■□□□□ 0.41
LEMD2-209ENST00000511171 PLEKHD1A6NEE1 506 aa17.59■□□□□ 0.41
LEMD2-209ENST00000511171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.41
LEMD2-209ENST00000511171 CFDP1Q9UEE9 299 aaPredicted RBP17.58■□□□□ 0.4
LEMD2-209ENST00000511171 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
LEMD2-209ENST00000511171 HNRNPUQ00839 825 aaKnown RBP eCLIP17.57■□□□□ 0.4
LEMD2-209ENST00000511171 SETD5Q9C0A6 1442 aa17.56■□□□□ 0.4
LEMD2-209ENST00000511171 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
LEMD2-209ENST00000511171 IGF1RP08069 1367 aa17.55■□□□□ 0.4
LEMD2-209ENST00000511171 RAB3GAP2Q9H2M9 1393 aa17.55■□□□□ 0.4
LEMD2-209ENST00000511171 FMN1Q68DA7 1419 aa17.53■□□□□ 0.4
LEMD2-209ENST00000511171 FKBP8Q14318 412 aa17.53■□□□□ 0.4
LEMD2-209ENST00000511171 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
LEMD2-209ENST00000511171 EIF4G2P78344 907 aaKnown RBP eCLIP17.53■□□□□ 0.4
LEMD2-209ENST00000511171 FAM9BQ8IZU0 186 aa17.52■□□□□ 0.4
LEMD2-209ENST00000511171 KCNH8Q96L42 1107 aa17.5■□□□□ 0.39
LEMD2-209ENST00000511171 KIF21BO75037 1637 aa17.5■□□□□ 0.39
LEMD2-209ENST00000511171 CFTRP13569 1480 aa17.49■□□□□ 0.39
LEMD2-209ENST00000511171 RAD54L2Q9Y4B4 1467 aa17.48■□□□□ 0.39
LEMD2-209ENST00000511171 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
LEMD2-209ENST00000511171 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
LEMD2-209ENST00000511171 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
LEMD2-209ENST00000511171 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
LEMD2-209ENST00000511171 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
LEMD2-209ENST00000511171 NPM1P06748 294 aaKnown RBP eCLIP17.42■□□□□ 0.38
LEMD2-209ENST00000511171 CUX1P39880 1505 aa17.4■□□□□ 0.38
LEMD2-209ENST00000511171 CHGAP10645 457 aaKnown RBP17.4■□□□□ 0.38
LEMD2-209ENST00000511171 TIMELESSQ9UNS1 1208 aa17.39■□□□□ 0.37
LEMD2-209ENST00000511171 ARAP1Q96P48 1450 aa17.38■□□□□ 0.37
LEMD2-209ENST00000511171 ERICH3Q5RHP9 1530 aa17.38■□□□□ 0.37
LEMD2-209ENST00000511171 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
LEMD2-209ENST00000511171 RGL3Q3MIN7 710 aa17.36■□□□□ 0.37
LEMD2-209ENST00000511171 FOXD1Q16676 465 aa17.35■□□□□ 0.37
LEMD2-209ENST00000511171 TMC1Q8TDI8 760 aa17.35■□□□□ 0.37
LEMD2-209ENST00000511171 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
LEMD2-209ENST00000511171 NESP48681 1621 aa17.34■□□□□ 0.37
LEMD2-209ENST00000511171 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
LEMD2-209ENST00000511171 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
LEMD2-209ENST00000511171 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.37
LEMD2-209ENST00000511171 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
LEMD2-209ENST00000511171 CARMIL2Q6F5E8 1435 aa17.3■□□□□ 0.36
LEMD2-209ENST00000511171 IRX6P78412 446 aaPredicted RBP17.29■□□□□ 0.36
LEMD2-209ENST00000511171 PPP1R15AO75807 674 aaPredicted RBP17.28■□□□□ 0.36
LEMD2-209ENST00000511171 PHLDB1Q86UU1 1377 aa17.27■□□□□ 0.35
LEMD2-209ENST00000511171 MPHOSPH9Q99550 1183 aa17.27■□□□□ 0.35
LEMD2-209ENST00000511171 CARD11Q9BXL7 1154 aa17.27■□□□□ 0.35
LEMD2-209ENST00000511171 LRRC9Q6ZRR7 1453 aa17.23■□□□□ 0.35
LEMD2-209ENST00000511171 SENP3-EIF4A1A0A087X0R7 540 aa17.23■□□□□ 0.35
LEMD2-209ENST00000511171 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
LEMD2-209ENST00000511171 JPH4Q96JJ6 628 aa17.22■□□□□ 0.35
LEMD2-209ENST00000511171 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.353e-7■■■■■ 30.5
LEMD2-209ENST00000511171 PKD2Q13563 968 aa17.21■□□□□ 0.35
LEMD2-209ENST00000511171 TOPBP1Q92547 1522 aa17.21■□□□□ 0.35
LEMD2-209ENST00000511171 POLA1P09884 1462 aaPredicted RBP17.2■□□□□ 0.34
LEMD2-209ENST00000511171 CCDC18Q5T9S5 1454 aa17.2■□□□□ 0.34
LEMD2-209ENST00000511171 DCAF11Q8TEB1 546 aa17.17■□□□□ 0.34
LEMD2-209ENST00000511171 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
LEMD2-209ENST00000511171 STAG3Q9UJ98 1225 aa17.16■□□□□ 0.34
LEMD2-209ENST00000511171 RRBP1Q9P2E9 1410 aaKnown RBP17.16■□□□□ 0.34
LEMD2-209ENST00000511171 FGD6Q6ZV73 1430 aa17.16■□□□□ 0.34
LEMD2-209ENST00000511171 L3MBTL2Q969R5 705 aa17.15■□□□□ 0.34
LEMD2-209ENST00000511171 CASKIN1Q8WXD9 1431 aa17.15■□□□□ 0.34
LEMD2-209ENST00000511171 SUPT16HQ9Y5B9 1047 aaKnown RBP17.14■□□□□ 0.33
LEMD2-209ENST00000511171 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
LEMD2-209ENST00000511171 CCER2I3L3R5 266 aa17.13■□□□□ 0.33
LEMD2-209ENST00000511171 NUP155O75694 1391 aa17.12■□□□□ 0.33
LEMD2-209ENST00000511171 ANKRD30AQ9BXX3 1397 aa17.12■□□□□ 0.33
LEMD2-209ENST00000511171 RTL5Q5HYW3 569 aaPredicted RBP17.12■□□□□ 0.33
LEMD2-209ENST00000511171 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
LEMD2-209ENST00000511171 ESF1Q9H501 851 aaKnown RBP17.12■□□□□ 0.33
LEMD2-209ENST00000511171 HNRNPMP52272 730 aaKnown RBP eCLIP17.11■□□□□ 0.33
LEMD2-209ENST00000511171 CCDC136Q96JN2 1154 aa17.11■□□□□ 0.33
LEMD2-209ENST00000511171 WDR43Q15061 677 aaKnown RBP eCLIP17.1■□□□□ 0.33
LEMD2-209ENST00000511171 DNMBPQ6XZF7 1577 aa17.1■□□□□ 0.33
LEMD2-209ENST00000511171 MYOM3Q5VTT5 1437 aa17.1■□□□□ 0.33
LEMD2-209ENST00000511171 FYCO1Q9BQS8 1478 aa17.09■□□□□ 0.33
LEMD2-209ENST00000511171 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
LEMD2-209ENST00000511171 BIVM-ERCC5R4GMW8 1640 aa17.06■□□□□ 0.32
LEMD2-209ENST00000511171 TIAM1Q13009 1591 aa17.05■□□□□ 0.32
LEMD2-209ENST00000511171 ZNF644Q9H582 1327 aaPredicted RBP17.05■□□□□ 0.32
LEMD2-209ENST00000511171 NEFMP07197 916 aa17.05■□□□□ 0.32
LEMD2-209ENST00000511171 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
LEMD2-209ENST00000511171 EFCAB5A4FU69 1503 aa17.04■□□□□ 0.32
LEMD2-209ENST00000511171 NPM2Q86SE8 214 aaKnown RBP17.03■□□□□ 0.32
LEMD2-209ENST00000511171 ABCA10Q8WWZ4 1543 aa17.03■□□□□ 0.32
LEMD2-209ENST00000511171 ANP32AP39687 249 aaKnown RBP17.02■□□□□ 0.32
LEMD2-209ENST00000511171 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
LEMD2-209ENST00000511171 KNSTRNQ9Y448 316 aa17.01■□□□□ 0.31
LEMD2-209ENST00000511171 EFCAB2Q5VUJ9 269 aa17■□□□□ 0.31
LEMD2-209ENST00000511171 PTPRGP23470 1445 aa17■□□□□ 0.31
LEMD2-209ENST00000511171 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms