RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
CALCOCO2-217ENST00000510356 EIF4G3O43432 1585 aaKnown RBP15.67■□□□□ 0.1
CALCOCO2-217ENST00000510356 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
CALCOCO2-217ENST00000510356 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
CALCOCO2-217ENST00000510356 AQRO60306 1485 aaKnown RBP eCLIP15.64■□□□□ 0.096e-13■■■□□ 16.6
CALCOCO2-217ENST00000510356 CHD1O14646 1710 aa15.61■□□□□ 0.09
CALCOCO2-217ENST00000510356 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
CALCOCO2-217ENST00000510356 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
CALCOCO2-217ENST00000510356 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
CALCOCO2-217ENST00000510356 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
CALCOCO2-217ENST00000510356 SYNJ1O43426 1573 aa15.5■□□□□ 0.07
CALCOCO2-217ENST00000510356 CLASP1Q7Z460 1538 aa15.49■□□□□ 0.07
CALCOCO2-217ENST00000510356 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
CALCOCO2-217ENST00000510356 SOGA1O94964 1423 aa15.49■□□□□ 0.07
CALCOCO2-217ENST00000510356 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
CALCOCO2-217ENST00000510356 ABCB7O75027 752 aa15.47■□□□□ 0.07
CALCOCO2-217ENST00000510356 POLA2Q14181 598 aa15.47■□□□□ 0.07
CALCOCO2-217ENST00000510356 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
CALCOCO2-217ENST00000510356 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.06
CALCOCO2-217ENST00000510356 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.06
CALCOCO2-217ENST00000510356 DSG3P32926 999 aa15.45■□□□□ 0.06
CALCOCO2-217ENST00000510356 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
CALCOCO2-217ENST00000510356 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
CALCOCO2-217ENST00000510356 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
CALCOCO2-217ENST00000510356 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
CALCOCO2-217ENST00000510356 FGD5Q6ZNL6 1462 aa15.33■□□□□ 0.04
CALCOCO2-217ENST00000510356 POTEHQ6S545 545 aa15.27■□□□□ 0.04
CALCOCO2-217ENST00000510356 ILDR1Q86SU0 546 aaPredicted RBP15.21■□□□□ 0.03
CALCOCO2-217ENST00000510356 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
CALCOCO2-217ENST00000510356 CUX1P39880 1505 aa15.19■□□□□ 0.02
CALCOCO2-217ENST00000510356 NPM1P06748 294 aaKnown RBP eCLIP15.18■□□□□ 0.02
CALCOCO2-217ENST00000510356 GRIN2AQ12879 1464 aa15.17■□□□□ 0.02
CALCOCO2-217ENST00000510356 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
CALCOCO2-217ENST00000510356 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
CALCOCO2-217ENST00000510356 ABCA10Q8WWZ4 1543 aa15.16■□□□□ 0.02
CALCOCO2-217ENST00000510356 FAM69CQ0P6D2 419 aa15.15■□□□□ 0.02
CALCOCO2-217ENST00000510356 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
CALCOCO2-217ENST00000510356 NUP160Q12769 1436 aa15.14■□□□□ 0.01
CALCOCO2-217ENST00000510356 ERCC6L2Q5T890 1561 aa15.14■□□□□ 0.01
CALCOCO2-217ENST00000510356 KDM4FA0A1W2PPD8 638 aa15.11■□□□□ 0.01
CALCOCO2-217ENST00000510356 ABCA5Q8WWZ7 1642 aa15.1■□□□□ 0.01
CALCOCO2-217ENST00000510356 ABCC10Q5T3U5 1492 aa15.1■□□□□ 0.01
CALCOCO2-217ENST00000510356 KIF13AQ9H1H9 1805 aa15.1■□□□□ 0.01
CALCOCO2-217ENST00000510356 SHROOM2Q13796 1616 aa15.08■□□□□ 0
CALCOCO2-217ENST00000510356 FHAD1B1AJZ9 1412 aa15.08■□□□□ 0
CALCOCO2-217ENST00000510356 PRG4Q92954 1404 aaPredicted RBP15.07■□□□□ 0
CALCOCO2-217ENST00000510356 JPH4Q96JJ6 628 aa15.06■□□□□ 0
CALCOCO2-217ENST00000510356 WRNQ14191 1432 aaPredicted RBP eCLIP15.06■□□□□ 0
CALCOCO2-217ENST00000510356 FKBP8Q14318 412 aa15.05■□□□□ -0
CALCOCO2-217ENST00000510356 ADAMTS12P58397 1594 aa15.03■□□□□ -0
CALCOCO2-217ENST00000510356 MAPKBP1O60336 1514 aa15.02■□□□□ -0
CALCOCO2-217ENST00000510356 KDM6BO15054 1643 aa15.01□□□□□ -0.01
CALCOCO2-217ENST00000510356 DIP2BQ9P265 1576 aa14.97□□□□□ -0.01
CALCOCO2-217ENST00000510356 ERICH3Q5RHP9 1530 aa14.97□□□□□ -0.01
CALCOCO2-217ENST00000510356 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
CALCOCO2-217ENST00000510356 ADCY10Q96PN6 1610 aa14.86□□□□□ -0.03
CALCOCO2-217ENST00000510356 ADGRL1O94910 1474 aa14.85□□□□□ -0.03
CALCOCO2-217ENST00000510356 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
CALCOCO2-217ENST00000510356 TSPOAP1O95153 1857 aa14.82□□□□□ -0.04
CALCOCO2-217ENST00000510356 RUSC2Q8N2Y8 1516 aa14.82□□□□□ -0.04
CALCOCO2-217ENST00000510356 KIAA0586Q9BVV6 1533 aa14.82□□□□□ -0.04
CALCOCO2-217ENST00000510356 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
CALCOCO2-217ENST00000510356 SPDYE2BA6NHP3 402 aa14.8□□□□□ -0.04
CALCOCO2-217ENST00000510356 SPDYE6P0CI01 402 aa14.8□□□□□ -0.04
CALCOCO2-217ENST00000510356 SPDYE2Q495Y8 402 aa14.8□□□□□ -0.04
CALCOCO2-217ENST00000510356 FBXO41Q8TF61 875 aa14.8□□□□□ -0.04
CALCOCO2-217ENST00000510356 PTPRGP23470 1445 aa14.8□□□□□ -0.04
CALCOCO2-217ENST00000510356 PLB1Q6P1J6 1458 aa14.8□□□□□ -0.04
CALCOCO2-217ENST00000510356 HECW2Q9P2P5 1572 aa14.78□□□□□ -0.04
CALCOCO2-217ENST00000510356 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
CALCOCO2-217ENST00000510356 GLI2P10070 1586 aa14.77□□□□□ -0.05
CALCOCO2-217ENST00000510356 ABCC2Q92887 1545 aa14.75□□□□□ -0.05
CALCOCO2-217ENST00000510356 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
CALCOCO2-217ENST00000510356 ASXL2Q76L83 1435 aa14.75□□□□□ -0.05
CALCOCO2-217ENST00000510356 TEX14Q8IWB6 1497 aa14.74□□□□□ -0.05
CALCOCO2-217ENST00000510356 TNIKQ9UKE5 1360 aa14.73□□□□□ -0.05
CALCOCO2-217ENST00000510356 TTBK1Q5TCY1 1321 aaPredicted RBP14.69□□□□□ -0.06
CALCOCO2-217ENST00000510356 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
CALCOCO2-217ENST00000510356 SSUH2Q9Y2M2 353 aa14.69□□□□□ -0.06
CALCOCO2-217ENST00000510356 UHRF1BP1LA0JNW5 1464 aa14.68□□□□□ -0.06
CALCOCO2-217ENST00000510356 IGF1RP08069 1367 aa14.67□□□□□ -0.06
CALCOCO2-217ENST00000510356 COL17A1Q9UMD9 1497 aaPredicted RBP14.67□□□□□ -0.06
CALCOCO2-217ENST00000510356 PPRC1Q5VV67 1664 aaKnown RBP14.65□□□□□ -0.06
CALCOCO2-217ENST00000510356 PROM2Q8N271 834 aa14.65□□□□□ -0.06
CALCOCO2-217ENST00000510356 UACAQ9BZF9 1416 aa14.65□□□□□ -0.06
CALCOCO2-217ENST00000510356 EPRSP07814 1512 aaKnown RBP14.64□□□□□ -0.07
CALCOCO2-217ENST00000510356 KIF27Q86VH2 1401 aa14.64□□□□□ -0.07
CALCOCO2-217ENST00000510356 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
CALCOCO2-217ENST00000510356 CUL7Q14999 1698 aa14.62□□□□□ -0.07
CALCOCO2-217ENST00000510356 MAP3K4Q9Y6R4 1608 aa14.6□□□□□ -0.07
CALCOCO2-217ENST00000510356 KDM5BQ9UGL1 1544 aa14.59□□□□□ -0.07
CALCOCO2-217ENST00000510356 CARMIL1Q5VZK9 1371 aa14.57□□□□□ -0.08
CALCOCO2-217ENST00000510356 AKT1S1Q96B36 256 aa14.55□□□□□ -0.08
CALCOCO2-217ENST00000510356 IQGAP2Q13576 1575 aa14.53□□□□□ -0.08
CALCOCO2-217ENST00000510356 MAGI3Q5TCQ9 1506 aa14.52□□□□□ -0.08
CALCOCO2-217ENST00000510356 WDR7Q9Y4E6 1490 aa14.52□□□□□ -0.08
CALCOCO2-217ENST00000510356 CD109Q6YHK3 1445 aa14.52□□□□□ -0.08
CALCOCO2-217ENST00000510356 LMTK3Q96Q04 1460 aa14.5□□□□□ -0.09
CALCOCO2-217ENST00000510356 DISP1Q96F81 1524 aa14.48□□□□□ -0.09
CALCOCO2-217ENST00000510356 ZCCHC11Q5TAX3 1644 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms