RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 AEBP2Q6ZN18 517 aaPredicted RBP26.11■■□□□ 1.77
CALCOCO2-217ENST00000510356 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
CALCOCO2-217ENST00000510356 PHF23Q9BUL5 403 aaPredicted RBP22.54■■□□□ 1.2
CALCOCO2-217ENST00000510356 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
CALCOCO2-217ENST00000510356 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
CALCOCO2-217ENST00000510356 PLPPR3Q6T4P5 718 aa20.83■□□□□ 0.93
CALCOCO2-217ENST00000510356 FOXD1Q16676 465 aa20.53■□□□□ 0.88
CALCOCO2-217ENST00000510356 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
CALCOCO2-217ENST00000510356 ADRA2BP18089 450 aa19.85■□□□□ 0.77
CALCOCO2-217ENST00000510356 POTEDQ86YR6 584 aa19.62■□□□□ 0.73
CALCOCO2-217ENST00000510356 ABCC9O60706 1549 aa19.56■□□□□ 0.72
CALCOCO2-217ENST00000510356 PIAS4Q8N2W9 510 aaPredicted RBP19.38■□□□□ 0.69
CALCOCO2-217ENST00000510356 MSH5O43196 834 aa19.07■□□□□ 0.64
CALCOCO2-217ENST00000510356 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
CALCOCO2-217ENST00000510356 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
CALCOCO2-217ENST00000510356 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.55
CALCOCO2-217ENST00000510356 PPP4R3CPQ6ZMV5 832 aa18.37■□□□□ 0.53
CALCOCO2-217ENST00000510356 NACADO15069 1562 aa18.21■□□□□ 0.51
CALCOCO2-217ENST00000510356 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
CALCOCO2-217ENST00000510356 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
CALCOCO2-217ENST00000510356 KCNA4P22459 653 aa18.09■□□□□ 0.49
CALCOCO2-217ENST00000510356 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
CALCOCO2-217ENST00000510356 MAPK8IP2Q13387 824 aaPredicted RBP17.99■□□□□ 0.47
CALCOCO2-217ENST00000510356 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
CALCOCO2-217ENST00000510356 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.45
CALCOCO2-217ENST00000510356 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
CALCOCO2-217ENST00000510356 UNC13AQ9UPW8 1703 aa17.83■□□□□ 0.44
CALCOCO2-217ENST00000510356 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
CALCOCO2-217ENST00000510356 DNAJC5Q9H3Z4 198 aa17.76■□□□□ 0.43
CALCOCO2-217ENST00000510356 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
CALCOCO2-217ENST00000510356 SHROOM4Q9ULL8 1493 aa17.71■□□□□ 0.43
CALCOCO2-217ENST00000510356 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
CALCOCO2-217ENST00000510356 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
CALCOCO2-217ENST00000510356 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
CALCOCO2-217ENST00000510356 EIF4G1Q04637 1599 aaKnown RBP17.48■□□□□ 0.39
CALCOCO2-217ENST00000510356 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
CALCOCO2-217ENST00000510356 DCAF1Q9Y4B6 1507 aa17.39■□□□□ 0.37
CALCOCO2-217ENST00000510356 HOXD11P31277 338 aaPredicted RBP17.34■□□□□ 0.37
CALCOCO2-217ENST00000510356 ZCCHC6Q5VYS8 1495 aaKnown RBP17.29■□□□□ 0.36
CALCOCO2-217ENST00000510356 SCRIBQ14160 1630 aa17.28■□□□□ 0.36
CALCOCO2-217ENST00000510356 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
CALCOCO2-217ENST00000510356 CUX2O14529 1486 aa17.17■□□□□ 0.34
CALCOCO2-217ENST00000510356 ERCC6Q03468 1493 aa17.01■□□□□ 0.31
CALCOCO2-217ENST00000510356 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
CALCOCO2-217ENST00000510356 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
CALCOCO2-217ENST00000510356 NCAPD3P42695 1498 aa16.84■□□□□ 0.29
CALCOCO2-217ENST00000510356 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
CALCOCO2-217ENST00000510356 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
CALCOCO2-217ENST00000510356 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
CALCOCO2-217ENST00000510356 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
CALCOCO2-217ENST00000510356 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
CALCOCO2-217ENST00000510356 ZBTB22O15209 634 aa16.64■□□□□ 0.25
CALCOCO2-217ENST00000510356 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
CALCOCO2-217ENST00000510356 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
CALCOCO2-217ENST00000510356 NESP48681 1621 aa16.61■□□□□ 0.25
CALCOCO2-217ENST00000510356 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
CALCOCO2-217ENST00000510356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.242e-14■■■□□ 15
CALCOCO2-217ENST00000510356 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
CALCOCO2-217ENST00000510356 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
CALCOCO2-217ENST00000510356 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
CALCOCO2-217ENST00000510356 BAZ1BQ9UIG0 1483 aaKnown RBP16.49■□□□□ 0.23
CALCOCO2-217ENST00000510356 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
CALCOCO2-217ENST00000510356 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
CALCOCO2-217ENST00000510356 OSCARQ8IYS5 282 aa16.36■□□□□ 0.21
CALCOCO2-217ENST00000510356 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
CALCOCO2-217ENST00000510356 KIF21AQ7Z4S6 1674 aa16.33■□□□□ 0.2
CALCOCO2-217ENST00000510356 MRC2Q9UBG0 1479 aa16.32■□□□□ 0.2
CALCOCO2-217ENST00000510356 CADPSQ9ULU8 1353 aa16.31■□□□□ 0.2
CALCOCO2-217ENST00000510356 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
CALCOCO2-217ENST00000510356 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
CALCOCO2-217ENST00000510356 WDR62O43379 1518 aa16.26■□□□□ 0.19
CALCOCO2-217ENST00000510356 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
CALCOCO2-217ENST00000510356 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
CALCOCO2-217ENST00000510356 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
CALCOCO2-217ENST00000510356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
CALCOCO2-217ENST00000510356 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
CALCOCO2-217ENST00000510356 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
CALCOCO2-217ENST00000510356 SAMD1Q6SPF0 538 aaPredicted RBP16.05■□□□□ 0.16
CALCOCO2-217ENST00000510356 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
CALCOCO2-217ENST00000510356 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
CALCOCO2-217ENST00000510356 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
CALCOCO2-217ENST00000510356 ATXN8OSP0DMR3 200 aa15.99■□□□□ 0.15
CALCOCO2-217ENST00000510356 CFTRP13569 1480 aa15.98■□□□□ 0.15
CALCOCO2-217ENST00000510356 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
CALCOCO2-217ENST00000510356 C1QBPQ07021 282 aaKnown RBP15.98■□□□□ 0.15
CALCOCO2-217ENST00000510356 ARHGEF11O15085 1522 aa15.96■□□□□ 0.15
CALCOCO2-217ENST00000510356 CYB5RLQ6IPT4 315 aa15.95■□□□□ 0.14
CALCOCO2-217ENST00000510356 URB2Q14146 1524 aaKnown RBP15.92■□□□□ 0.14
CALCOCO2-217ENST00000510356 ATF5Q9Y2D1 282 aaPredicted RBP15.9■□□□□ 0.14
CALCOCO2-217ENST00000510356 APLP2Q06481 763 aa15.89■□□□□ 0.13
CALCOCO2-217ENST00000510356 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
CALCOCO2-217ENST00000510356 WIZO95785 1651 aa15.88■□□□□ 0.13
CALCOCO2-217ENST00000510356 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
CALCOCO2-217ENST00000510356 ZNF608Q9ULD9 1512 aaPredicted RBP15.8■□□□□ 0.12
CALCOCO2-217ENST00000510356 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.12
CALCOCO2-217ENST00000510356 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
CALCOCO2-217ENST00000510356 CAPN15O75808 1086 aa15.75■□□□□ 0.11
CALCOCO2-217ENST00000510356 ARAP1Q96P48 1450 aa15.75■□□□□ 0.11
CALCOCO2-217ENST00000510356 FBLN2P98095 1184 aa15.73■□□□□ 0.11
CALCOCO2-217ENST00000510356 TOP2AP11388 1531 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms