RNA–Protein interactions for RNA: ENST00000510200.1

LINC02428-202, Transcript of long intergenic non-protein coding RNA 2428, humanhuman

TSL 3

Gene LINC02428, Length 417 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02428-202ENST00000510200 WDR62O43379 1518 aa14.34□□□□□ -0.11
LINC02428-202ENST00000510200 MRC2Q9UBG0 1479 aa14.32□□□□□ -0.12
LINC02428-202ENST00000510200 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
LINC02428-202ENST00000510200 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
LINC02428-202ENST00000510200 URB2Q14146 1524 aaKnown RBP14.28□□□□□ -0.12
LINC02428-202ENST00000510200 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
LINC02428-202ENST00000510200 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.13
LINC02428-202ENST00000510200 SUPT5HO00267 1087 aaKnown RBP14.22□□□□□ -0.13
LINC02428-202ENST00000510200 PITPNM1O00562 1244 aa14.22□□□□□ -0.13
LINC02428-202ENST00000510200 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
LINC02428-202ENST00000510200 DNMBPQ6XZF7 1577 aa14.12□□□□□ -0.15
LINC02428-202ENST00000510200 CUX1P39880 1505 aa14.07□□□□□ -0.16
LINC02428-202ENST00000510200 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
LINC02428-202ENST00000510200 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
LINC02428-202ENST00000510200 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
LINC02428-202ENST00000510200 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
LINC02428-202ENST00000510200 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
LINC02428-202ENST00000510200 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
LINC02428-202ENST00000510200 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
LINC02428-202ENST00000510200 ZNF608Q9ULD9 1512 aaPredicted RBP14.03□□□□□ -0.16
LINC02428-202ENST00000510200 IFT140Q96RY7 1462 aa14.02□□□□□ -0.16
LINC02428-202ENST00000510200 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
LINC02428-202ENST00000510200 FXR2P51116 673 aaKnown RBP eCLIP13.98□□□□□ -0.17
LINC02428-202ENST00000510200 FGD5Q6ZNL6 1462 aa13.98□□□□□ -0.17
LINC02428-202ENST00000510200 RAD54L2Q9Y4B4 1467 aa13.96□□□□□ -0.17
LINC02428-202ENST00000510200 DNAJC5Q9H3Z4 198 aa13.96□□□□□ -0.17
LINC02428-202ENST00000510200 WDR97A6NE52 1622 aa13.95□□□□□ -0.18
LINC02428-202ENST00000510200 EIF4G3O43432 1585 aaKnown RBP13.95□□□□□ -0.18
LINC02428-202ENST00000510200 SYNJ1O43426 1573 aa13.94□□□□□ -0.18
LINC02428-202ENST00000510200 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
LINC02428-202ENST00000510200 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
LINC02428-202ENST00000510200 AQRO60306 1485 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC02428-202ENST00000510200 SOGA1O94964 1423 aa13.9□□□□□ -0.19
LINC02428-202ENST00000510200 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.19
LINC02428-202ENST00000510200 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
LINC02428-202ENST00000510200 TDRD9Q8NDG6 1382 aaKnown RBP13.84□□□□□ -0.19
LINC02428-202ENST00000510200 ABCA5Q8WWZ7 1642 aa13.84□□□□□ -0.19
LINC02428-202ENST00000510200 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
LINC02428-202ENST00000510200 PRKAR2AP13861 404 aaKnown RBP13.83□□□□□ -0.2
LINC02428-202ENST00000510200 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
LINC02428-202ENST00000510200 PROM2Q8N271 834 aa13.77□□□□□ -0.21
LINC02428-202ENST00000510200 GRIN2BQ13224 1484 aa13.76□□□□□ -0.21
LINC02428-202ENST00000510200 GAPVD1Q14C86 1478 aa13.76□□□□□ -0.21
LINC02428-202ENST00000510200 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
LINC02428-202ENST00000510200 CHD1O14646 1710 aa13.76□□□□□ -0.21
LINC02428-202ENST00000510200 PBRM1Q86U86 1689 aa13.75□□□□□ -0.21
LINC02428-202ENST00000510200 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
LINC02428-202ENST00000510200 FKBP8Q14318 412 aa13.74□□□□□ -0.21
LINC02428-202ENST00000510200 SYNJ2O15056 1496 aa13.69□□□□□ -0.22
LINC02428-202ENST00000510200 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
LINC02428-202ENST00000510200 ADAMTS12P58397 1594 aa13.69□□□□□ -0.22
LINC02428-202ENST00000510200 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
LINC02428-202ENST00000510200 CLASP1Q7Z460 1538 aa13.68□□□□□ -0.22
LINC02428-202ENST00000510200 HAX1O00165 279 aa13.66□□□□□ -0.22
LINC02428-202ENST00000510200 CREBZFQ9NS37 354 aa13.62□□□□□ -0.23
LINC02428-202ENST00000510200 GRIN2AQ12879 1464 aa13.61□□□□□ -0.23
LINC02428-202ENST00000510200 NUP160Q12769 1436 aa13.61□□□□□ -0.23
LINC02428-202ENST00000510200 ARHGEF11O15085 1522 aa13.6□□□□□ -0.23
LINC02428-202ENST00000510200 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
LINC02428-202ENST00000510200 EVX2Q03828 476 aa13.6□□□□□ -0.23
LINC02428-202ENST00000510200 RIMBP3CA6NJZ7 1639 aa13.6□□□□□ -0.23
LINC02428-202ENST00000510200 RIMBP3BA6NNM3 1639 aa13.6□□□□□ -0.23
LINC02428-202ENST00000510200 RIMBP3Q9UFD9 1639 aa13.6□□□□□ -0.23
LINC02428-202ENST00000510200 IGF1RP08069 1367 aa13.59□□□□□ -0.23
LINC02428-202ENST00000510200 CEP170Q5SW79 1584 aa13.59□□□□□ -0.23
LINC02428-202ENST00000510200 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
LINC02428-202ENST00000510200 FARP1Q9Y4F1 1045 aaPredicted RBP13.57□□□□□ -0.24
LINC02428-202ENST00000510200 RUSC2Q8N2Y8 1516 aa13.55□□□□□ -0.24
LINC02428-202ENST00000510200 CHMP7Q8WUX9 453 aaPredicted RBP13.55□□□□□ -0.24
LINC02428-202ENST00000510200 ARAP1Q96P48 1450 aa13.53□□□□□ -0.24
LINC02428-202ENST00000510200 SHROOM2Q13796 1616 aa13.53□□□□□ -0.24
LINC02428-202ENST00000510200 C19orf67A6NJJ6 358 aa13.52□□□□□ -0.25
LINC02428-202ENST00000510200 CUL7Q14999 1698 aa13.51□□□□□ -0.25
LINC02428-202ENST00000510200 ERCC6L2Q5T890 1561 aa13.49□□□□□ -0.25
LINC02428-202ENST00000510200 CARMIL1Q5VZK9 1371 aa13.45□□□□□ -0.26
LINC02428-202ENST00000510200 MNX1P50219 401 aaPredicted RBP13.44□□□□□ -0.26
LINC02428-202ENST00000510200 PRXQ9BXM0 1461 aa13.42□□□□□ -0.26
LINC02428-202ENST00000510200 TRIM41Q8WV44 630 aa13.42□□□□□ -0.26
LINC02428-202ENST00000510200 KIAA0586Q9BVV6 1533 aa13.41□□□□□ -0.26
LINC02428-202ENST00000510200 CD44P16070 742 aaKnown RBP13.41□□□□□ -0.26
LINC02428-202ENST00000510200 RAPGEF2Q9Y4G8 1499 aa13.37□□□□□ -0.27
LINC02428-202ENST00000510200 CYB5RLQ6IPT4 315 aa13.35□□□□□ -0.27
LINC02428-202ENST00000510200 PRG4Q92954 1404 aaPredicted RBP13.35□□□□□ -0.27
LINC02428-202ENST00000510200 MIER1Q8N108 512 aa13.34□□□□□ -0.27
LINC02428-202ENST00000510200 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
LINC02428-202ENST00000510200 IQGAP2Q13576 1575 aa13.32□□□□□ -0.28
LINC02428-202ENST00000510200 DISP1Q96F81 1524 aa13.3□□□□□ -0.28
LINC02428-202ENST00000510200 UGGT2Q9NYU1 1516 aa13.3□□□□□ -0.28
LINC02428-202ENST00000510200 EEA1Q15075 1411 aa13.3□□□□□ -0.28
LINC02428-202ENST00000510200 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
LINC02428-202ENST00000510200 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC02428-202ENST00000510200 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.29
LINC02428-202ENST00000510200 CTTNBP2Q8WZ74 1663 aa13.27□□□□□ -0.29
LINC02428-202ENST00000510200 GABBR2O75899 941 aa13.25□□□□□ -0.29
LINC02428-202ENST00000510200 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
LINC02428-202ENST00000510200 KIF21BO75037 1637 aa13.24□□□□□ -0.29
LINC02428-202ENST00000510200 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
LINC02428-202ENST00000510200 KIAA0556O60303 1618 aa13.23□□□□□ -0.29
LINC02428-202ENST00000510200 ADCY10Q96PN6 1610 aa13.23□□□□□ -0.29
LINC02428-202ENST00000510200 PLSCR2Q9NRY7 297 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms