RNA–Protein interactions for RNA: ENST00000510200.1

LINC02428-202, Transcript of long intergenic non-protein coding RNA 2428, humanhuman

TSL 3

Gene LINC02428, Length 417 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02428-202ENST00000510200 AEBP2Q6ZN18 517 aaPredicted RBP26.14■■□□□ 1.78
LINC02428-202ENST00000510200 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
LINC02428-202ENST00000510200 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
LINC02428-202ENST00000510200 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
LINC02428-202ENST00000510200 FOXD1Q16676 465 aa20.66■□□□□ 0.9
LINC02428-202ENST00000510200 PLPPR3Q6T4P5 718 aa20.15■□□□□ 0.82
LINC02428-202ENST00000510200 POTEDQ86YR6 584 aa20.15■□□□□ 0.82
LINC02428-202ENST00000510200 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
LINC02428-202ENST00000510200 ADRA2BP18089 450 aa19.55■□□□□ 0.72
LINC02428-202ENST00000510200 NISCHQ9Y2I1 1504 aa19.45■□□□□ 0.7
LINC02428-202ENST00000510200 PIAS4Q8N2W9 510 aaPredicted RBP19.37■□□□□ 0.69
LINC02428-202ENST00000510200 MSH5O43196 834 aa19.11■□□□□ 0.65
LINC02428-202ENST00000510200 MAPK8IP2Q13387 824 aaPredicted RBP17.88■□□□□ 0.45
LINC02428-202ENST00000510200 PPP4R3CPQ6ZMV5 832 aa17.75■□□□□ 0.43
LINC02428-202ENST00000510200 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
LINC02428-202ENST00000510200 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
LINC02428-202ENST00000510200 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
LINC02428-202ENST00000510200 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
LINC02428-202ENST00000510200 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
LINC02428-202ENST00000510200 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
LINC02428-202ENST00000510200 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
LINC02428-202ENST00000510200 KCNA4P22459 653 aa16.95■□□□□ 0.3
LINC02428-202ENST00000510200 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
LINC02428-202ENST00000510200 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
LINC02428-202ENST00000510200 ABCC9O60706 1549 aa16.86■□□□□ 0.29
LINC02428-202ENST00000510200 CACNB1Q02641 598 aaPredicted RBP16.59■□□□□ 0.25
LINC02428-202ENST00000510200 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
LINC02428-202ENST00000510200 RNF39Q9H2S5 420 aa16.39■□□□□ 0.21
LINC02428-202ENST00000510200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC02428-202ENST00000510200 ZCCHC6Q5VYS8 1495 aaKnown RBP16.23■□□□□ 0.19
LINC02428-202ENST00000510200 NACADO15069 1562 aa16.22■□□□□ 0.19
LINC02428-202ENST00000510200 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.18
LINC02428-202ENST00000510200 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
LINC02428-202ENST00000510200 DCAF1Q9Y4B6 1507 aa16.13■□□□□ 0.17
LINC02428-202ENST00000510200 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
LINC02428-202ENST00000510200 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
LINC02428-202ENST00000510200 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
LINC02428-202ENST00000510200 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.16
LINC02428-202ENST00000510200 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
LINC02428-202ENST00000510200 UNC13AQ9UPW8 1703 aa15.94■□□□□ 0.14
LINC02428-202ENST00000510200 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
LINC02428-202ENST00000510200 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
LINC02428-202ENST00000510200 SCRIBQ14160 1630 aa15.72■□□□□ 0.11
LINC02428-202ENST00000510200 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.11
LINC02428-202ENST00000510200 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
LINC02428-202ENST00000510200 ZBTB22O15209 634 aa15.64■□□□□ 0.09
LINC02428-202ENST00000510200 CAPN15O75808 1086 aa15.64■□□□□ 0.09
LINC02428-202ENST00000510200 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
LINC02428-202ENST00000510200 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
LINC02428-202ENST00000510200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
LINC02428-202ENST00000510200 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
LINC02428-202ENST00000510200 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
LINC02428-202ENST00000510200 POTEHQ6S545 545 aa15.53■□□□□ 0.08
LINC02428-202ENST00000510200 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
LINC02428-202ENST00000510200 APLP2Q06481 763 aa15.48■□□□□ 0.07
LINC02428-202ENST00000510200 DSG3P32926 999 aa15.47■□□□□ 0.07
LINC02428-202ENST00000510200 ZNF219Q9P2Y4 722 aaPredicted RBP15.4■□□□□ 0.06
LINC02428-202ENST00000510200 EIF4G1Q04637 1599 aaKnown RBP15.37■□□□□ 0.05
LINC02428-202ENST00000510200 ABCB7O75027 752 aa15.37■□□□□ 0.05
LINC02428-202ENST00000510200 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
LINC02428-202ENST00000510200 CC2D2AQ9P2K1 1620 aa15.29■□□□□ 0.04
LINC02428-202ENST00000510200 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
LINC02428-202ENST00000510200 CECR2Q9BXF3 1484 aa15.18■□□□□ 0.02
LINC02428-202ENST00000510200 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
LINC02428-202ENST00000510200 POLA2Q14181 598 aa15.13■□□□□ 0.01
LINC02428-202ENST00000510200 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
LINC02428-202ENST00000510200 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
LINC02428-202ENST00000510200 BAZ1AQ9NRL2 1556 aaPredicted RBP15.02□□□□□ -0.01
LINC02428-202ENST00000510200 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
LINC02428-202ENST00000510200 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
LINC02428-202ENST00000510200 PEG3Q9GZU2 1588 aa15.01□□□□□ -0.01
LINC02428-202ENST00000510200 MROH2BQ7Z745 1585 aa15□□□□□ -0.01
LINC02428-202ENST00000510200 HMGXB3Q12766 1538 aa14.94□□□□□ -0.02
LINC02428-202ENST00000510200 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
LINC02428-202ENST00000510200 RSF1Q96T23 1441 aaPredicted RBP14.82□□□□□ -0.04
LINC02428-202ENST00000510200 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
LINC02428-202ENST00000510200 WIZO95785 1651 aa14.81□□□□□ -0.04
LINC02428-202ENST00000510200 ZBTB12Q9Y330 459 aaPredicted RBP14.77□□□□□ -0.05
LINC02428-202ENST00000510200 OSCARQ8IYS5 282 aa14.69□□□□□ -0.06
LINC02428-202ENST00000510200 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
LINC02428-202ENST00000510200 NESP48681 1621 aa14.65□□□□□ -0.06
LINC02428-202ENST00000510200 TOP2AP11388 1531 aaKnown RBP14.65□□□□□ -0.06
LINC02428-202ENST00000510200 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
LINC02428-202ENST00000510200 FBLN2P98095 1184 aa14.58□□□□□ -0.08
LINC02428-202ENST00000510200 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
LINC02428-202ENST00000510200 CADPSQ9ULU8 1353 aa14.52□□□□□ -0.08
LINC02428-202ENST00000510200 CFTRP13569 1480 aa14.49□□□□□ -0.09
LINC02428-202ENST00000510200 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
LINC02428-202ENST00000510200 CCDC88BA6NC98 1476 aa14.47□□□□□ -0.09
LINC02428-202ENST00000510200 KIF21AQ7Z4S6 1674 aa14.46□□□□□ -0.09
LINC02428-202ENST00000510200 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
LINC02428-202ENST00000510200 AKT1S1Q96B36 256 aa14.43□□□□□ -0.1
LINC02428-202ENST00000510200 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
LINC02428-202ENST00000510200 CUX2O14529 1486 aa14.4□□□□□ -0.1
LINC02428-202ENST00000510200 SPDYE2BA6NHP3 402 aa14.37□□□□□ -0.11
LINC02428-202ENST00000510200 SPDYE6P0CI01 402 aa14.37□□□□□ -0.11
LINC02428-202ENST00000510200 SPDYE2Q495Y8 402 aa14.37□□□□□ -0.11
LINC02428-202ENST00000510200 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
LINC02428-202ENST00000510200 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
LINC02428-202ENST00000510200 PRDM2Q13029 1718 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms