RNA–Protein interactions for RNA: ENST00000509477.1

CLGN-203, Transcript of calmegin, humanhuman

TSL 3

Gene CLGN, Length 706 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-203ENST00000509477 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
CLGN-203ENST00000509477 CYB5RLQ6IPT4 315 aa12.28□□□□□ -0.44
CLGN-203ENST00000509477 ARHGEF11O15085 1522 aa12.27□□□□□ -0.44
CLGN-203ENST00000509477 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.45
CLGN-203ENST00000509477 MROH2BQ7Z745 1585 aa12.19□□□□□ -0.46
CLGN-203ENST00000509477 PIP4P2Q8N4L2 257 aa12.17□□□□□ -0.46
CLGN-203ENST00000509477 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
CLGN-203ENST00000509477 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
CLGN-203ENST00000509477 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
CLGN-203ENST00000509477 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
CLGN-203ENST00000509477 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
CLGN-203ENST00000509477 PROM2Q8N271 834 aa12.13□□□□□ -0.47
CLGN-203ENST00000509477 HAX1O00165 279 aa12.12□□□□□ -0.47
CLGN-203ENST00000509477 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
CLGN-203ENST00000509477 AMER1Q5JTC6 1135 aaPredicted RBP12.1□□□□□ -0.47
CLGN-203ENST00000509477 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
CLGN-203ENST00000509477 ARAP1Q96P48 1450 aa12.09□□□□□ -0.47
CLGN-203ENST00000509477 ZNF608Q9ULD9 1512 aaPredicted RBP12.07□□□□□ -0.48
CLGN-203ENST00000509477 CFTRP13569 1480 aa12.06□□□□□ -0.48
CLGN-203ENST00000509477 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
CLGN-203ENST00000509477 WIZO95785 1651 aa12.04□□□□□ -0.48
CLGN-203ENST00000509477 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
CLGN-203ENST00000509477 CHD1O14646 1710 aa12.01□□□□□ -0.49
CLGN-203ENST00000509477 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLGN-203ENST00000509477 RTN4Q9NQC3 1192 aaKnown RBP12.01□□□□□ -0.49
CLGN-203ENST00000509477 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
CLGN-203ENST00000509477 PITPNM1O00562 1244 aa12□□□□□ -0.49
CLGN-203ENST00000509477 EIF4G3O43432 1585 aaKnown RBP12□□□□□ -0.49
CLGN-203ENST00000509477 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
CLGN-203ENST00000509477 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLGN-203ENST00000509477 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
CLGN-203ENST00000509477 PRDM2Q13029 1718 aa11.9□□□□□ -0.5
CLGN-203ENST00000509477 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
CLGN-203ENST00000509477 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
CLGN-203ENST00000509477 EVX2Q03828 476 aa11.86□□□□□ -0.51
CLGN-203ENST00000509477 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
CLGN-203ENST00000509477 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
CLGN-203ENST00000509477 CHMP7Q8WUX9 453 aaPredicted RBP11.84□□□□□ -0.51
CLGN-203ENST00000509477 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
CLGN-203ENST00000509477 TOP2AP11388 1531 aaKnown RBP11.84□□□□□ -0.51
CLGN-203ENST00000509477 SYNJ1O43426 1573 aa11.83□□□□□ -0.52
CLGN-203ENST00000509477 DNMBPQ6XZF7 1577 aa11.82□□□□□ -0.52
CLGN-203ENST00000509477 CLASP1Q7Z460 1538 aa11.81□□□□□ -0.52
CLGN-203ENST00000509477 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
CLGN-203ENST00000509477 GAPVD1Q14C86 1478 aa11.78□□□□□ -0.52
CLGN-203ENST00000509477 SNAPC4Q5SXM2 1469 aa11.78□□□□□ -0.52
CLGN-203ENST00000509477 TDRD9Q8NDG6 1382 aaKnown RBP11.77□□□□□ -0.53
CLGN-203ENST00000509477 IFNLR1Q8IU57 520 aaPredicted RBP11.76□□□□□ -0.53
CLGN-203ENST00000509477 POLA1P09884 1462 aaPredicted RBP11.75□□□□□ -0.53
CLGN-203ENST00000509477 MIER1Q8N108 512 aa11.74□□□□□ -0.53
CLGN-203ENST00000509477 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
CLGN-203ENST00000509477 RAD54L2Q9Y4B4 1467 aa11.73□□□□□ -0.53
CLGN-203ENST00000509477 CCDC88BA6NC98 1476 aa11.71□□□□□ -0.53
CLGN-203ENST00000509477 MAGI1Q96QZ7 1491 aaPredicted RBP11.71□□□□□ -0.53
CLGN-203ENST00000509477 SOGA1O94964 1423 aa11.71□□□□□ -0.53
CLGN-203ENST00000509477 PRKAR2AP13861 404 aaKnown RBP11.71□□□□□ -0.53
CLGN-203ENST00000509477 KLHL34Q8N239 644 aa11.71□□□□□ -0.53
CLGN-203ENST00000509477 PRR29P0C7W0 189 aa11.7□□□□□ -0.54
CLGN-203ENST00000509477 SYNJ2O15056 1496 aa11.69□□□□□ -0.54
CLGN-203ENST00000509477 GRIN2BQ13224 1484 aa11.67□□□□□ -0.54
CLGN-203ENST00000509477 WDR97A6NE52 1622 aa11.67□□□□□ -0.54
CLGN-203ENST00000509477 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
CLGN-203ENST00000509477 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
CLGN-203ENST00000509477 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
CLGN-203ENST00000509477 LHX8Q68G74 356 aa11.64□□□□□ -0.55
CLGN-203ENST00000509477 KIF13AQ9H1H9 1805 aa11.63□□□□□ -0.55
CLGN-203ENST00000509477 FGD5Q6ZNL6 1462 aa11.62□□□□□ -0.55
CLGN-203ENST00000509477 GABBR2O75899 941 aa11.61□□□□□ -0.55
CLGN-203ENST00000509477 ERCC6L2Q5T890 1561 aa11.6□□□□□ -0.55
CLGN-203ENST00000509477 FAM69CQ0P6D2 419 aa11.6□□□□□ -0.55
CLGN-203ENST00000509477 SPOCK2Q92563 424 aa11.6□□□□□ -0.55
CLGN-203ENST00000509477 PBRM1Q86U86 1689 aa11.59□□□□□ -0.55
CLGN-203ENST00000509477 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
CLGN-203ENST00000509477 KDM6BO15054 1643 aa11.57□□□□□ -0.56
CLGN-203ENST00000509477 NPM1P06748 294 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLGN-203ENST00000509477 CEP170Q5SW79 1584 aa11.55□□□□□ -0.56
CLGN-203ENST00000509477 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
CLGN-203ENST00000509477 ABCC10Q5T3U5 1492 aa11.51□□□□□ -0.57
CLGN-203ENST00000509477 GRIN2AQ12879 1464 aa11.51□□□□□ -0.57
CLGN-203ENST00000509477 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
CLGN-203ENST00000509477 CUX1P39880 1505 aa11.49□□□□□ -0.57
CLGN-203ENST00000509477 HECW2Q9P2P5 1572 aa11.48□□□□□ -0.57
CLGN-203ENST00000509477 DIP2BQ9P265 1576 aa11.47□□□□□ -0.57
CLGN-203ENST00000509477 TSPOAP1O95153 1857 aa11.46□□□□□ -0.57
CLGN-203ENST00000509477 ADGRL1O94910 1474 aa11.46□□□□□ -0.57
CLGN-203ENST00000509477 FARP1Q9Y4F1 1045 aaPredicted RBP11.46□□□□□ -0.57
CLGN-203ENST00000509477 SHROOM2Q13796 1616 aa11.46□□□□□ -0.58
CLGN-203ENST00000509477 NUP160Q12769 1436 aa11.45□□□□□ -0.58
CLGN-203ENST00000509477 PRG4Q92954 1404 aaPredicted RBP11.45□□□□□ -0.58
CLGN-203ENST00000509477 PKD2Q13563 968 aa11.45□□□□□ -0.58
CLGN-203ENST00000509477 FBXO41Q8TF61 875 aa11.45□□□□□ -0.58
CLGN-203ENST00000509477 ABCA5Q8WWZ7 1642 aa11.45□□□□□ -0.58
CLGN-203ENST00000509477 MAPKBP1O60336 1514 aa11.44□□□□□ -0.58
CLGN-203ENST00000509477 ADAMTS12P58397 1594 aa11.42□□□□□ -0.58
CLGN-203ENST00000509477 ABCA10Q8WWZ4 1543 aa11.42□□□□□ -0.58
CLGN-203ENST00000509477 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
CLGN-203ENST00000509477 JPH4Q96JJ6 628 aa11.39□□□□□ -0.59
CLGN-203ENST00000509477 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
CLGN-203ENST00000509477 FHAD1B1AJZ9 1412 aa11.37□□□□□ -0.59
CLGN-203ENST00000509477 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms