RNA–Protein interactions for RNA: ENST00000509477.1

CLGN-203, Transcript of calmegin, humanhuman

TSL 3

Gene CLGN, Length 706 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-203ENST00000509477 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
CLGN-203ENST00000509477 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
CLGN-203ENST00000509477 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
CLGN-203ENST00000509477 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
CLGN-203ENST00000509477 FOXD1Q16676 465 aa17.77■□□□□ 0.44
CLGN-203ENST00000509477 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
CLGN-203ENST00000509477 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
CLGN-203ENST00000509477 MSH5O43196 834 aa16.89■□□□□ 0.29
CLGN-203ENST00000509477 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
CLGN-203ENST00000509477 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
CLGN-203ENST00000509477 ADRA2BP18089 450 aa16.41■□□□□ 0.22
CLGN-203ENST00000509477 NISCHQ9Y2I1 1504 aa15.83■□□□□ 0.12
CLGN-203ENST00000509477 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
CLGN-203ENST00000509477 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
CLGN-203ENST00000509477 ABCC9O60706 1549 aa15.04■□□□□ -0
CLGN-203ENST00000509477 KCNA4P22459 653 aa15.01□□□□□ -0.01
CLGN-203ENST00000509477 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
CLGN-203ENST00000509477 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
CLGN-203ENST00000509477 CACNB1Q02641 598 aaPredicted RBP14.81□□□□□ -0.04
CLGN-203ENST00000509477 NCBP3Q53F19 620 aaKnown RBP14.8□□□□□ -0.04
CLGN-203ENST00000509477 CNKSR2Q8WXI2 1034 aa14.63□□□□□ -0.07
CLGN-203ENST00000509477 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
CLGN-203ENST00000509477 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
CLGN-203ENST00000509477 HOXD11P31277 338 aaPredicted RBP14.47□□□□□ -0.09
CLGN-203ENST00000509477 DCAF8L1A6NGE4 600 aa14.44□□□□□ -0.1
CLGN-203ENST00000509477 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
CLGN-203ENST00000509477 RNF216Q9NWF9 866 aaPredicted RBP14.42□□□□□ -0.1
CLGN-203ENST00000509477 SLC4A1APQ9BWU0 796 aaKnown RBP14.35□□□□□ -0.11
CLGN-203ENST00000509477 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
CLGN-203ENST00000509477 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
CLGN-203ENST00000509477 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
CLGN-203ENST00000509477 RB1CC1Q8TDY2 1594 aa14.05□□□□□ -0.16
CLGN-203ENST00000509477 PABPN1Q86U42 306 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLGN-203ENST00000509477 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
CLGN-203ENST00000509477 NACADO15069 1562 aa13.79□□□□□ -0.2
CLGN-203ENST00000509477 ZBTB22O15209 634 aa13.78□□□□□ -0.2
CLGN-203ENST00000509477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLGN-203ENST00000509477 DCAF8L2P0C7V8 631 aa13.77□□□□□ -0.21
CLGN-203ENST00000509477 DNAJC5Q9H3Z4 198 aa13.75□□□□□ -0.21
CLGN-203ENST00000509477 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
CLGN-203ENST00000509477 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
CLGN-203ENST00000509477 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
CLGN-203ENST00000509477 CECR2Q9BXF3 1484 aa13.59□□□□□ -0.23
CLGN-203ENST00000509477 BICRAQ9NZM4 1560 aa13.58□□□□□ -0.23
CLGN-203ENST00000509477 CC2D2AQ9P2K1 1620 aa13.52□□□□□ -0.25
CLGN-203ENST00000509477 POTEHQ6S545 545 aa13.5□□□□□ -0.25
CLGN-203ENST00000509477 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
CLGN-203ENST00000509477 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
CLGN-203ENST00000509477 SHROOM4Q9ULL8 1493 aa13.36□□□□□ -0.27
CLGN-203ENST00000509477 MYO15BQ96JP2 1530 aa13.35□□□□□ -0.27
CLGN-203ENST00000509477 EIF4G1Q04637 1599 aaKnown RBP13.35□□□□□ -0.27
CLGN-203ENST00000509477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
CLGN-203ENST00000509477 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
CLGN-203ENST00000509477 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
CLGN-203ENST00000509477 DSG3P32926 999 aa13.23□□□□□ -0.29
CLGN-203ENST00000509477 APLP2Q06481 763 aa13.23□□□□□ -0.29
CLGN-203ENST00000509477 CAPN15O75808 1086 aa13.22□□□□□ -0.29
CLGN-203ENST00000509477 SPINK5Q9NQ38 1064 aaPredicted RBP13.21□□□□□ -0.29
CLGN-203ENST00000509477 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
CLGN-203ENST00000509477 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
CLGN-203ENST00000509477 CUX2O14529 1486 aa13.15□□□□□ -0.3
CLGN-203ENST00000509477 ERCC6Q03468 1493 aa13.08□□□□□ -0.32
CLGN-203ENST00000509477 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
CLGN-203ENST00000509477 ZNF219Q9P2Y4 722 aaPredicted RBP13.06□□□□□ -0.32
CLGN-203ENST00000509477 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
CLGN-203ENST00000509477 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
CLGN-203ENST00000509477 DCAF1Q9Y4B6 1507 aa12.99□□□□□ -0.33
CLGN-203ENST00000509477 ZCCHC6Q5VYS8 1495 aaKnown RBP12.98□□□□□ -0.33
CLGN-203ENST00000509477 ABCB7O75027 752 aa12.88□□□□□ -0.35
CLGN-203ENST00000509477 POLA2Q14181 598 aa12.75□□□□□ -0.37
CLGN-203ENST00000509477 NESP48681 1621 aa12.73□□□□□ -0.37
CLGN-203ENST00000509477 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
CLGN-203ENST00000509477 RBM42Q9BTD8 480 aaKnown RBP12.69□□□□□ -0.38
CLGN-203ENST00000509477 THOC2Q8NI27 1593 aaKnown RBP12.69□□□□□ -0.38
CLGN-203ENST00000509477 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
CLGN-203ENST00000509477 ATAD2BQ9ULI0 1458 aa12.61□□□□□ -0.39
CLGN-203ENST00000509477 FKBP8Q14318 412 aa12.6□□□□□ -0.39
CLGN-203ENST00000509477 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
CLGN-203ENST00000509477 HMGXB3Q12766 1538 aa12.58□□□□□ -0.4
CLGN-203ENST00000509477 ZBTB12Q9Y330 459 aaPredicted RBP12.56□□□□□ -0.4
CLGN-203ENST00000509477 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
CLGN-203ENST00000509477 KIF21AQ7Z4S6 1674 aa12.55□□□□□ -0.4
CLGN-203ENST00000509477 FBLN2P98095 1184 aa12.53□□□□□ -0.4
CLGN-203ENST00000509477 PDS5BQ9NTI5 1447 aa12.53□□□□□ -0.4
CLGN-203ENST00000509477 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
CLGN-203ENST00000509477 BAZ1AQ9NRL2 1556 aaPredicted RBP12.52□□□□□ -0.41
CLGN-203ENST00000509477 OSCARQ8IYS5 282 aa12.51□□□□□ -0.41
CLGN-203ENST00000509477 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
CLGN-203ENST00000509477 SMARCA4P51532 1647 aa12.48□□□□□ -0.41
CLGN-203ENST00000509477 MRC2Q9UBG0 1479 aa12.44□□□□□ -0.42
CLGN-203ENST00000509477 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
CLGN-203ENST00000509477 WDR62O43379 1518 aa12.4□□□□□ -0.42
CLGN-203ENST00000509477 RIMBP3CA6NJZ7 1639 aa12.37□□□□□ -0.43
CLGN-203ENST00000509477 RIMBP3BA6NNM3 1639 aa12.37□□□□□ -0.43
CLGN-203ENST00000509477 RIMBP3Q9UFD9 1639 aa12.37□□□□□ -0.43
CLGN-203ENST00000509477 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
CLGN-203ENST00000509477 SLC24A1O60721 1099 aa12.34□□□□□ -0.43
CLGN-203ENST00000509477 CADPSQ9ULU8 1353 aa12.33□□□□□ -0.44
CLGN-203ENST00000509477 PEG3Q9GZU2 1588 aa12.3□□□□□ -0.44
CLGN-203ENST00000509477 CEP164Q9UPV0 1460 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms