RNA–Protein interactions for RNA: ENST00000508909.5

FRAS1-204, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 2

Gene FRAS1, Length 2,297 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-204ENST00000508909 P3H3Q8IVL6 736 aa23.18■■□□□ 1.3
FRAS1-204ENST00000508909 FHAD1B1AJZ9 1412 aa23.14■■□□□ 1.3
FRAS1-204ENST00000508909 FANCD2Q9BXW9 1451 aa23.13■■□□□ 1.29
FRAS1-204ENST00000508909 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
FRAS1-204ENST00000508909 FAM50AQ14320 339 aaKnown RBP23.11■■□□□ 1.29
FRAS1-204ENST00000508909 PCF11O94913 1555 aaKnown RBP23.11■■□□□ 1.29
FRAS1-204ENST00000508909 SIN3AQ96ST3 1273 aa23.1■■□□□ 1.29
FRAS1-204ENST00000508909 CC2D2AQ9P2K1 1620 aa23.09■■□□□ 1.29
FRAS1-204ENST00000508909 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.28
FRAS1-204ENST00000508909 FHOD3Q2V2M9 1422 aa23.07■■□□□ 1.28
FRAS1-204ENST00000508909 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
FRAS1-204ENST00000508909 ABCA10Q8WWZ4 1543 aa23.05■■□□□ 1.28
FRAS1-204ENST00000508909 KCNH8Q96L42 1107 aa23.05■■□□□ 1.28
FRAS1-204ENST00000508909 SUPT16HQ9Y5B9 1047 aaKnown RBP23.03■■□□□ 1.28
FRAS1-204ENST00000508909 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
FRAS1-204ENST00000508909 DNMBPQ6XZF7 1577 aa23.03■■□□□ 1.28
FRAS1-204ENST00000508909 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
FRAS1-204ENST00000508909 TOPBP1Q92547 1522 aa23.02■■□□□ 1.28
FRAS1-204ENST00000508909 CASKIN1Q8WXD9 1431 aa23■■□□□ 1.27
FRAS1-204ENST00000508909 FYCO1Q9BQS8 1478 aa22.99■■□□□ 1.27
FRAS1-204ENST00000508909 NESP48681 1621 aa22.97■■□□□ 1.27
FRAS1-204ENST00000508909 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.27
FRAS1-204ENST00000508909 EFCAB5A4FU69 1503 aa22.96■■□□□ 1.27
FRAS1-204ENST00000508909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.95■■□□□ 1.26
FRAS1-204ENST00000508909 DDX10Q13206 875 aaKnown RBP22.93■■□□□ 1.26
FRAS1-204ENST00000508909 TIMELESSQ9UNS1 1208 aa22.93■■□□□ 1.26
FRAS1-204ENST00000508909 PPP1R15AO75807 674 aaPredicted RBP22.9■■□□□ 1.26
FRAS1-204ENST00000508909 CUL7Q14999 1698 aa22.89■■□□□ 1.26
FRAS1-204ENST00000508909 SNAPC4Q5SXM2 1469 aa22.87■■□□□ 1.25
FRAS1-204ENST00000508909 FGD6Q6ZV73 1430 aa22.87■■□□□ 1.25
FRAS1-204ENST00000508909 FMN1Q68DA7 1419 aa22.86■■□□□ 1.25
FRAS1-204ENST00000508909 CTTNBP2Q8WZ74 1663 aa22.85■■□□□ 1.25
FRAS1-204ENST00000508909 HIRIP3Q9BW71 556 aaPredicted RBP22.84■■□□□ 1.25
FRAS1-204ENST00000508909 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
FRAS1-204ENST00000508909 URB2Q14146 1524 aaKnown RBP22.83■■□□□ 1.25
FRAS1-204ENST00000508909 TDRD9Q8NDG6 1382 aaKnown RBP22.81■■□□□ 1.24
FRAS1-204ENST00000508909 MTUS2Q5JR59 1369 aa22.78■■□□□ 1.24
FRAS1-204ENST00000508909 MYT1Q01538 1121 aa22.78■■□□□ 1.24
FRAS1-204ENST00000508909 SAMD9Q5K651 1589 aa22.76■■□□□ 1.23
FRAS1-204ENST00000508909 HFM1A2PYH4 1435 aa22.76■■□□□ 1.23
FRAS1-204ENST00000508909 CCDC18Q5T9S5 1454 aa22.75■■□□□ 1.23
FRAS1-204ENST00000508909 LRRIQ1Q96JM4 1722 aa22.74■■□□□ 1.23
FRAS1-204ENST00000508909 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
FRAS1-204ENST00000508909 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
FRAS1-204ENST00000508909 NCOA2Q15596 1464 aa22.72■■□□□ 1.23
FRAS1-204ENST00000508909 UACAQ9BZF9 1416 aa22.72■■□□□ 1.23
FRAS1-204ENST00000508909 GAPVD1Q14C86 1478 aa22.71■■□□□ 1.23
FRAS1-204ENST00000508909 NAIPQ13075 1403 aa22.71■■□□□ 1.23
FRAS1-204ENST00000508909 PTPN23Q9H3S7 1636 aa22.7■■□□□ 1.22
FRAS1-204ENST00000508909 LAMC3Q9Y6N6 1575 aa22.7■■□□□ 1.22
FRAS1-204ENST00000508909 TSHZ2Q9NRE2 1034 aa22.7■■□□□ 1.22
FRAS1-204ENST00000508909 MYOM3Q5VTT5 1437 aa22.7■■□□□ 1.22
FRAS1-204ENST00000508909 TONSLQ96HA7 1378 aa22.68■■□□□ 1.22
FRAS1-204ENST00000508909 CCER2I3L3R5 266 aa22.68■■□□□ 1.22
FRAS1-204ENST00000508909 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
FRAS1-204ENST00000508909 ANP32CO43423 234 aa22.62■■□□□ 1.21
FRAS1-204ENST00000508909 MAGI3Q5TCQ9 1506 aa22.62■■□□□ 1.21
FRAS1-204ENST00000508909 KDM5BQ9UGL1 1544 aa22.61■■□□□ 1.21
FRAS1-204ENST00000508909 THOC2Q8NI27 1593 aaKnown RBP22.61■■□□□ 1.21
FRAS1-204ENST00000508909 ARHGEF11O15085 1522 aa22.6■■□□□ 1.21
FRAS1-204ENST00000508909 FKBP8Q14318 412 aa22.6■■□□□ 1.21
FRAS1-204ENST00000508909 SUPT6HQ7KZ85 1726 aaKnown RBP22.59■■□□□ 1.21
FRAS1-204ENST00000508909 EHBP1L1Q8N3D4 1523 aa22.59■■□□□ 1.21
FRAS1-204ENST00000508909 UGGT2Q9NYU1 1516 aa22.59■■□□□ 1.21
FRAS1-204ENST00000508909 BCANQ96GW7 911 aa22.59■■□□□ 1.21
FRAS1-204ENST00000508909 TRIM52Q96A61 297 aa22.58■■□□□ 1.21
FRAS1-204ENST00000508909 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.2
FRAS1-204ENST00000508909 RRP7BPQ9NSQ0 103 aa22.56■■□□□ 1.2
FRAS1-204ENST00000508909 DENND4BO75064 1496 aaPredicted RBP22.54■■□□□ 1.2
FRAS1-204ENST00000508909 CHIC2Q9UKJ5 165 aa22.53■■□□□ 1.2
FRAS1-204ENST00000508909 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
FRAS1-204ENST00000508909 TCOF1Q13428 1488 aaKnown RBP22.52■■□□□ 1.2
FRAS1-204ENST00000508909 KIF21AQ7Z4S6 1674 aa22.48■■□□□ 1.19
FRAS1-204ENST00000508909 KDM6BO15054 1643 aa22.45■■□□□ 1.18
FRAS1-204ENST00000508909 EPRSP07814 1512 aaKnown RBP22.45■■□□□ 1.18
FRAS1-204ENST00000508909 WASHC2AQ641Q2 1341 aa22.43■■□□□ 1.18
FRAS1-204ENST00000508909 HSPA5P11021 654 aaKnown RBP22.43■■□□□ 1.18
FRAS1-204ENST00000508909 HECW1Q76N89 1606 aa22.41■■□□□ 1.18
FRAS1-204ENST00000508909 AKNAQ7Z591 1439 aa22.41■■□□□ 1.18
FRAS1-204ENST00000508909 GCC2Q8IWJ2 1684 aa22.41■■□□□ 1.18
FRAS1-204ENST00000508909 CDK13Q14004 1512 aaKnown RBP22.41■■□□□ 1.18
FRAS1-204ENST00000508909 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
FRAS1-204ENST00000508909 IQGAP2Q13576 1575 aa22.39■■□□□ 1.18
FRAS1-204ENST00000508909 ARID3CA6NKF2 412 aa22.39■■□□□ 1.17
FRAS1-204ENST00000508909 MIA2Q96PC5 1412 aa22.38■■□□□ 1.17
FRAS1-204ENST00000508909 NEFLP07196 543 aa22.38■■□□□ 1.17
FRAS1-204ENST00000508909 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
FRAS1-204ENST00000508909 FOXD1Q16676 465 aa22.36■■□□□ 1.17
FRAS1-204ENST00000508909 L3MBTL2Q969R5 705 aa22.36■■□□□ 1.17
FRAS1-204ENST00000508909 WDR62O43379 1518 aa22.35■■□□□ 1.17
FRAS1-204ENST00000508909 ADAMTS12P58397 1594 aa22.34■■□□□ 1.17
FRAS1-204ENST00000508909 EIF4G2P78344 907 aaKnown RBP eCLIP22.32■■□□□ 1.16
FRAS1-204ENST00000508909 C11orf95C9JLR9 678 aaPredicted RBP22.32■■□□□ 1.16
FRAS1-204ENST00000508909 HNRNPUQ00839 825 aaKnown RBP eCLIP22.3■■□□□ 1.16
FRAS1-204ENST00000508909 ANKRD30BQ9BXX2 1392 aa22.27■■□□□ 1.16
FRAS1-204ENST00000508909 CCDC184Q52MB2 194 aa22.27■■□□□ 1.16
FRAS1-204ENST00000508909 ZNF644Q9H582 1327 aaPredicted RBP22.27■■□□□ 1.16
FRAS1-204ENST00000508909 NBPF8Q3BBV2 869 aa22.26■■□□□ 1.15
FRAS1-204ENST00000508909 ABCC5O15440 1437 aa22.25■■□□□ 1.15
FRAS1-204ENST00000508909 DAPK1P53355 1430 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms