RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 ZNF316A6NFI3 1004 aaPredicted RBP9.05□□□□□ -0.96
KDM3B-204ENST00000507996 WDR62O43379 1518 aa9.04□□□□□ -0.96
KDM3B-204ENST00000507996 ABCA10Q8WWZ4 1543 aa9.04□□□□□ -0.96
KDM3B-204ENST00000507996 IGF1RP08069 1367 aa9.03□□□□□ -0.96
KDM3B-204ENST00000507996 AQRO60306 1485 aaKnown RBP eCLIP9.03□□□□□ -0.963e-7■■■■■ 36.5
KDM3B-204ENST00000507996 RAPGEF2Q9Y4G8 1499 aa9.03□□□□□ -0.96
KDM3B-204ENST00000507996 GOLGA3Q08378 1498 aa9.02□□□□□ -0.97
KDM3B-204ENST00000507996 SUPT16HQ9Y5B9 1047 aaKnown RBP9.02□□□□□ -0.97
KDM3B-204ENST00000507996 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
KDM3B-204ENST00000507996 ZNF608Q9ULD9 1512 aaPredicted RBP9.01□□□□□ -0.97
KDM3B-204ENST00000507996 GAPVD1Q14C86 1478 aa9.01□□□□□ -0.97
KDM3B-204ENST00000507996 CARMIL1Q5VZK9 1371 aa9.01□□□□□ -0.97
KDM3B-204ENST00000507996 TARBP1Q13395 1621 aaKnown RBP8.99□□□□□ -0.97
KDM3B-204ENST00000507996 IFT140Q96RY7 1462 aa8.99□□□□□ -0.97
KDM3B-204ENST00000507996 FBLN2P98095 1184 aa8.99□□□□□ -0.97
KDM3B-204ENST00000507996 PRXQ9BXM0 1461 aa8.97□□□□□ -0.97
KDM3B-204ENST00000507996 TNIKQ9UKE5 1360 aa8.97□□□□□ -0.97
KDM3B-204ENST00000507996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.97□□□□□ -0.97
KDM3B-204ENST00000507996 KIF21BO75037 1637 aa8.97□□□□□ -0.97
KDM3B-204ENST00000507996 WDR97A6NE52 1622 aa8.97□□□□□ -0.97
KDM3B-204ENST00000507996 CEP162Q5TB80 1403 aa8.95□□□□□ -0.98
KDM3B-204ENST00000507996 ABCA5Q8WWZ7 1642 aa8.95□□□□□ -0.98
KDM3B-204ENST00000507996 MIER1Q8N108 512 aa8.94□□□□□ -0.98
KDM3B-204ENST00000507996 RTN4Q9NQC3 1192 aaKnown RBP8.94□□□□□ -0.98
KDM3B-204ENST00000507996 GRIN2BQ13224 1484 aa8.93□□□□□ -0.98
KDM3B-204ENST00000507996 P3H3Q8IVL6 736 aa8.93□□□□□ -0.98
KDM3B-204ENST00000507996 CHMP7Q8WUX9 453 aaPredicted RBP8.93□□□□□ -0.98
KDM3B-204ENST00000507996 MYT1LQ9UL68 1186 aa8.92□□□□□ -0.98
KDM3B-204ENST00000507996 ERICH3Q5RHP9 1530 aa8.92□□□□□ -0.98
KDM3B-204ENST00000507996 EIF4G3O43432 1585 aaKnown RBP8.92□□□□□ -0.98
KDM3B-204ENST00000507996 PBRM1Q86U86 1689 aa8.91□□□□□ -0.98
KDM3B-204ENST00000507996 CLIP1P30622 1438 aa8.91□□□□□ -0.98
KDM3B-204ENST00000507996 YTHDC1Q96MU7 727 aaKnown RBP8.91□□□□□ -0.98
KDM3B-204ENST00000507996 SNAPC4Q5SXM2 1469 aa8.91□□□□□ -0.98
KDM3B-204ENST00000507996 CUL7Q14999 1698 aa8.9□□□□□ -0.99
KDM3B-204ENST00000507996 FHAD1B1AJZ9 1412 aa8.88□□□□□ -0.99
KDM3B-204ENST00000507996 ATP1B4Q9UN42 357 aaPredicted RBP8.87□□□□□ -0.99
KDM3B-204ENST00000507996 ADAMTS12P58397 1594 aa8.85□□□□□ -0.99
KDM3B-204ENST00000507996 MAGI1Q96QZ7 1491 aaPredicted RBP8.83□□□□□ -1
KDM3B-204ENST00000507996 ERICH6BQ5W0A0 696 aa8.82□□□□□ -1
KDM3B-204ENST00000507996 SYNJ2O15056 1496 aa8.82□□□□□ -1
KDM3B-204ENST00000507996 GRIN2AQ12879 1464 aa8.82□□□□□ -1
KDM3B-204ENST00000507996 ARHGAP35Q9NRY4 1499 aa8.81□□□□□ -1
KDM3B-204ENST00000507996 FANCIQ9NVI1 1328 aa8.81□□□□□ -1
KDM3B-204ENST00000507996 CTTNBP2Q8WZ74 1663 aa8.8□□□□□ -1
KDM3B-204ENST00000507996 ARAP1Q96P48 1450 aa8.8□□□□□ -1
KDM3B-204ENST00000507996 FHOD3Q2V2M9 1422 aa8.8□□□□□ -1
KDM3B-204ENST00000507996 RBM19Q9Y4C8 960 aaKnown RBP8.8□□□□□ -1
KDM3B-204ENST00000507996 VPS8Q8N3P4 1428 aa8.78□□□□□ -1
KDM3B-204ENST00000507996 PIAS4Q8N2W9 510 aaPredicted RBP8.78□□□□□ -1
KDM3B-204ENST00000507996 UBE2Q2Q8WVN8 375 aa8.78□□□□□ -1
KDM3B-204ENST00000507996 CHD1O14646 1710 aa8.78□□□□□ -1
KDM3B-204ENST00000507996 ARID3CA6NKF2 412 aa8.78□□□□□ -1
KDM3B-204ENST00000507996 JPH4Q96JJ6 628 aa8.77□□□□□ -1.01
KDM3B-204ENST00000507996 IQGAP2Q13576 1575 aa8.77□□□□□ -1.01
KDM3B-204ENST00000507996 MSH5O43196 834 aa8.76□□□□□ -1.01
KDM3B-204ENST00000507996 CEP170Q5SW79 1584 aa8.76□□□□□ -1.01
KDM3B-204ENST00000507996 KIAA0586Q9BVV6 1533 aa8.75□□□□□ -1.01
KDM3B-204ENST00000507996 PPP4R3CPQ6ZMV5 832 aa8.74□□□□□ -1.01
KDM3B-204ENST00000507996 HNRNPUL2Q1KMD3 747 aaKnown RBP8.72□□□□□ -1.01
KDM3B-204ENST00000507996 NUP160Q12769 1436 aa8.72□□□□□ -1.01
KDM3B-204ENST00000507996 EFCAB5A4FU69 1503 aa8.72□□□□□ -1.01
KDM3B-204ENST00000507996 KANK4Q5T7N3 995 aaPredicted RBP8.72□□□□□ -1.01
KDM3B-204ENST00000507996 ANO8Q9HCE9 1232 aaPredicted RBP8.72□□□□□ -1.01
KDM3B-204ENST00000507996 FMN1Q68DA7 1419 aa8.7□□□□□ -1.02
KDM3B-204ENST00000507996 CARMIL2Q6F5E8 1435 aa8.69□□□□□ -1.02
KDM3B-204ENST00000507996 PRG4Q92954 1404 aaPredicted RBP8.69□□□□□ -1.02
KDM3B-204ENST00000507996 OSCARQ8IYS5 282 aa8.69□□□□□ -1.02
KDM3B-204ENST00000507996 SAMD9Q5K651 1589 aa8.69□□□□□ -1.02
KDM3B-204ENST00000507996 DISP1Q96F81 1524 aa8.68□□□□□ -1.02
KDM3B-204ENST00000507996 UGGT2Q9NYU1 1516 aa8.68□□□□□ -1.02
KDM3B-204ENST00000507996 DEKP35659 375 aaKnown RBP8.68□□□□□ -1.02
KDM3B-204ENST00000507996 SLC4A1APQ9BWU0 796 aaKnown RBP8.68□□□□□ -1.02
KDM3B-204ENST00000507996 PCF11O94913 1555 aaKnown RBP8.68□□□□□ -1.02
KDM3B-204ENST00000507996 KIAA0556O60303 1618 aa8.67□□□□□ -1.02
KDM3B-204ENST00000507996 CASKIN1Q8WXD9 1431 aa8.65□□□□□ -1.02
KDM3B-204ENST00000507996 PTPRGP23470 1445 aa8.64□□□□□ -1.03
KDM3B-204ENST00000507996 PLB1Q6P1J6 1458 aa8.63□□□□□ -1.03
KDM3B-204ENST00000507996 FYCO1Q9BQS8 1478 aa8.63□□□□□ -1.03
KDM3B-204ENST00000507996 ERCC6L2Q5T890 1561 aa8.63□□□□□ -1.03
KDM3B-204ENST00000507996 MTUS2Q5JR59 1369 aa8.63□□□□□ -1.03
KDM3B-204ENST00000507996 ITGAEP38570 1179 aa8.62□□□□□ -1.03
KDM3B-204ENST00000507996 CLASP1Q7Z460 1538 aa8.62□□□□□ -1.03
KDM3B-204ENST00000507996 TIAM1Q13009 1591 aa8.62□□□□□ -1.03
KDM3B-204ENST00000507996 SALL2Q9Y467 1007 aaPredicted RBP8.62□□□□□ -1.03
KDM3B-204ENST00000507996 FKBP8Q14318 412 aa8.61□□□□□ -1.03
KDM3B-204ENST00000507996 CDK13Q14004 1512 aaKnown RBP8.61□□□□□ -1.03
KDM3B-204ENST00000507996 LRRC9Q6ZRR7 1453 aa8.6□□□□□ -1.03
KDM3B-204ENST00000507996 HECW1Q76N89 1606 aa8.59□□□□□ -1.03
KDM3B-204ENST00000507996 FAM50AQ14320 339 aaKnown RBP8.59□□□□□ -1.04
KDM3B-204ENST00000507996 RAPGEF6Q8TEU7 1601 aa8.59□□□□□ -1.04
KDM3B-204ENST00000507996 EPRSP07814 1512 aaKnown RBP8.58□□□□□ -1.04
KDM3B-204ENST00000507996 DAXXQ9UER7 740 aaPredicted RBP8.58□□□□□ -1.04
KDM3B-204ENST00000507996 CDK11AQ9UQ88 783 aaPredicted RBP8.58□□□□□ -1.04
KDM3B-204ENST00000507996 LRRIQ1Q96JM4 1722 aa8.58□□□□□ -1.04
KDM3B-204ENST00000507996 NUP153P49790 1475 aaKnown RBP8.58□□□□□ -1.04
KDM3B-204ENST00000507996 SHROOM2Q13796 1616 aa8.58□□□□□ -1.04
KDM3B-204ENST00000507996 NEFLP07196 543 aa8.56□□□□□ -1.04
KDM3B-204ENST00000507996 CCDC18Q5T9S5 1454 aa8.56□□□□□ -1.04
KDM3B-204ENST00000507996 PLEKHD1A6NEE1 506 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms