RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
NEDD4-206ENST00000507063 EVX2Q03828 476 aa12.52□□□□□ -0.41
NEDD4-206ENST00000507063 C19orf67A6NJJ6 358 aa12.5□□□□□ -0.41
NEDD4-206ENST00000507063 THOC2Q8NI27 1593 aaKnown RBP12.5□□□□□ -0.41
NEDD4-206ENST00000507063 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
NEDD4-206ENST00000507063 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
NEDD4-206ENST00000507063 WIZO95785 1651 aa12.47□□□□□ -0.41
NEDD4-206ENST00000507063 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
NEDD4-206ENST00000507063 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
NEDD4-206ENST00000507063 CADPSQ9ULU8 1353 aa12.42□□□□□ -0.42
NEDD4-206ENST00000507063 GABBR2O75899 941 aa12.36□□□□□ -0.43
NEDD4-206ENST00000507063 RSF1Q96T23 1441 aaPredicted RBP12.33□□□□□ -0.44
NEDD4-206ENST00000507063 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.44
NEDD4-206ENST00000507063 CLCN6P51797 869 aa12.31□□□□□ -0.44
NEDD4-206ENST00000507063 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
NEDD4-206ENST00000507063 WDR62O43379 1518 aa12.3□□□□□ -0.44
NEDD4-206ENST00000507063 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
NEDD4-206ENST00000507063 FANCD2Q9BXW9 1451 aa12.28□□□□□ -0.44
NEDD4-206ENST00000507063 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
NEDD4-206ENST00000507063 TRIM41Q8WV44 630 aa12.27□□□□□ -0.45
NEDD4-206ENST00000507063 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.45
NEDD4-206ENST00000507063 CFTRP13569 1480 aa12.26□□□□□ -0.45
NEDD4-206ENST00000507063 TOP2AP11388 1531 aaKnown RBP12.23□□□□□ -0.45
NEDD4-206ENST00000507063 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.45
NEDD4-206ENST00000507063 LHX8Q68G74 356 aa12.19□□□□□ -0.46
NEDD4-206ENST00000507063 CCDC88BA6NC98 1476 aa12.16□□□□□ -0.46
NEDD4-206ENST00000507063 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
NEDD4-206ENST00000507063 DCBLD2Q96PD2 775 aa12.11□□□□□ -0.47
NEDD4-206ENST00000507063 ZNF608Q9ULD9 1512 aaPredicted RBP12.1□□□□□ -0.47
NEDD4-206ENST00000507063 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
NEDD4-206ENST00000507063 ZNF579Q8NAF0 562 aaKnown RBP12.08□□□□□ -0.48
NEDD4-206ENST00000507063 CREBZFQ9NS37 354 aa12.08□□□□□ -0.48
NEDD4-206ENST00000507063 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
NEDD4-206ENST00000507063 PRDM2Q13029 1718 aa12.05□□□□□ -0.48
NEDD4-206ENST00000507063 TOPBP1Q92547 1522 aa12.04□□□□□ -0.48
NEDD4-206ENST00000507063 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
NEDD4-206ENST00000507063 IFT140Q96RY7 1462 aa12.02□□□□□ -0.49
NEDD4-206ENST00000507063 POTEIP0CG38 1075 aa12□□□□□ -0.49
NEDD4-206ENST00000507063 AQRO60306 1485 aaKnown RBP eCLIP11.99□□□□□ -0.49
NEDD4-206ENST00000507063 RIMBP3CA6NJZ7 1639 aa11.97□□□□□ -0.49
NEDD4-206ENST00000507063 RIMBP3BA6NNM3 1639 aa11.97□□□□□ -0.49
NEDD4-206ENST00000507063 RIMBP3Q9UFD9 1639 aa11.97□□□□□ -0.49
NEDD4-206ENST00000507063 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.49
NEDD4-206ENST00000507063 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.5
NEDD4-206ENST00000507063 TARBP1Q13395 1621 aaKnown RBP11.94□□□□□ -0.5
NEDD4-206ENST00000507063 RAD54L2Q9Y4B4 1467 aa11.94□□□□□ -0.5
NEDD4-206ENST00000507063 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
NEDD4-206ENST00000507063 POLA1P09884 1462 aaPredicted RBP11.93□□□□□ -0.5
NEDD4-206ENST00000507063 ARHGEF11O15085 1522 aa11.92□□□□□ -0.5
NEDD4-206ENST00000507063 CYB5RLQ6IPT4 315 aa11.91□□□□□ -0.5
NEDD4-206ENST00000507063 TDRD9Q8NDG6 1382 aaKnown RBP11.91□□□□□ -0.5
NEDD4-206ENST00000507063 CHD1O14646 1710 aa11.89□□□□□ -0.51
NEDD4-206ENST00000507063 SOGA1O94964 1423 aa11.88□□□□□ -0.51
NEDD4-206ENST00000507063 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
NEDD4-206ENST00000507063 CUX1P39880 1505 aa11.85□□□□□ -0.51
NEDD4-206ENST00000507063 FGD5Q6ZNL6 1462 aa11.84□□□□□ -0.51
NEDD4-206ENST00000507063 SUPT5HO00267 1087 aaKnown RBP11.83□□□□□ -0.52
NEDD4-206ENST00000507063 PHF12Q96QT6 1004 aa11.83□□□□□ -0.52
NEDD4-206ENST00000507063 SNAPC4Q5SXM2 1469 aa11.82□□□□□ -0.52
NEDD4-206ENST00000507063 ARAP1Q96P48 1450 aa11.82□□□□□ -0.52
NEDD4-206ENST00000507063 PLEKHG5O94827 1062 aa11.8□□□□□ -0.52
NEDD4-206ENST00000507063 MNX1P50219 401 aaPredicted RBP11.8□□□□□ -0.52
NEDD4-206ENST00000507063 CHMP7Q8WUX9 453 aaPredicted RBP11.79□□□□□ -0.52
NEDD4-206ENST00000507063 PROM2Q8N271 834 aa11.74□□□□□ -0.53
NEDD4-206ENST00000507063 GRIN2BQ13224 1484 aa11.74□□□□□ -0.53
NEDD4-206ENST00000507063 CLASP1Q7Z460 1538 aa11.74□□□□□ -0.53
NEDD4-206ENST00000507063 WDR97A6NE52 1622 aa11.73□□□□□ -0.53
NEDD4-206ENST00000507063 GAPVD1Q14C86 1478 aa11.71□□□□□ -0.53
NEDD4-206ENST00000507063 MAGI1Q96QZ7 1491 aaPredicted RBP11.71□□□□□ -0.53
NEDD4-206ENST00000507063 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
NEDD4-206ENST00000507063 PBRM1Q86U86 1689 aa11.69□□□□□ -0.54
NEDD4-206ENST00000507063 TSPYL2Q9H2G4 693 aaPredicted RBP11.69□□□□□ -0.54
NEDD4-206ENST00000507063 SYNJ1O43426 1573 aa11.69□□□□□ -0.54
NEDD4-206ENST00000507063 FKBP8Q14318 412 aa11.68□□□□□ -0.54
NEDD4-206ENST00000507063 MS4A3Q96HJ5 214 aa11.68□□□□□ -0.54
NEDD4-206ENST00000507063 ABCA10Q8WWZ4 1543 aa11.67□□□□□ -0.54
NEDD4-206ENST00000507063 ASTLQ6HA08 431 aaPredicted RBP11.67□□□□□ -0.54
NEDD4-206ENST00000507063 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
NEDD4-206ENST00000507063 C7P10643 843 aa11.66□□□□□ -0.54
NEDD4-206ENST00000507063 ABCA5Q8WWZ7 1642 aa11.66□□□□□ -0.54
NEDD4-206ENST00000507063 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
NEDD4-206ENST00000507063 ERCC6L2Q5T890 1561 aa11.65□□□□□ -0.54
NEDD4-206ENST00000507063 MIER1Q8N108 512 aa11.64□□□□□ -0.55
NEDD4-206ENST00000507063 METRNQ9UJH8 293 aa11.64□□□□□ -0.55
NEDD4-206ENST00000507063 MAMSTRQ6ZN01 415 aa11.63□□□□□ -0.55
NEDD4-206ENST00000507063 WRNQ14191 1432 aaPredicted RBP eCLIP11.62□□□□□ -0.55
NEDD4-206ENST00000507063 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
NEDD4-206ENST00000507063 PELP1Q8IZL8 1130 aaKnown RBP11.61□□□□□ -0.55
NEDD4-206ENST00000507063 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
NEDD4-206ENST00000507063 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
NEDD4-206ENST00000507063 CEP170Q5SW79 1584 aa11.59□□□□□ -0.55
NEDD4-206ENST00000507063 TOP2BQ02880 1626 aa11.59□□□□□ -0.55
NEDD4-206ENST00000507063 BIVM-ERCC5R4GMW8 1640 aa11.58□□□□□ -0.56
NEDD4-206ENST00000507063 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
NEDD4-206ENST00000507063 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
NEDD4-206ENST00000507063 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
NEDD4-206ENST00000507063 ADAMTS12P58397 1594 aa11.57□□□□□ -0.56
NEDD4-206ENST00000507063 NUP160Q12769 1436 aa11.56□□□□□ -0.56
NEDD4-206ENST00000507063 KIF12Q96FN5 646 aa11.56□□□□□ -0.56
NEDD4-206ENST00000507063 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms