RNA–Protein interactions for RNA: ENST00000506787.5

UBE2B-205, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-205ENST00000506787 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.76
UBE2B-205ENST00000506787 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.76
UBE2B-205ENST00000506787 ATF5Q9Y2D1 282 aaPredicted RBP19.82■□□□□ 0.76
UBE2B-205ENST00000506787 CHD1O14646 1710 aa19.82■□□□□ 0.76
UBE2B-205ENST00000506787 TOPBP1Q92547 1522 aa19.75■□□□□ 0.75
UBE2B-205ENST00000506787 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.751e-7■■■□□ 17.1
UBE2B-205ENST00000506787 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
UBE2B-205ENST00000506787 FBLN2P98095 1184 aa19.71■□□□□ 0.75
UBE2B-205ENST00000506787 TOP2AP11388 1531 aaKnown RBP19.68■□□□□ 0.74
UBE2B-205ENST00000506787 REM2Q8IYK8 340 aaPredicted RBP19.64■□□□□ 0.73
UBE2B-205ENST00000506787 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
UBE2B-205ENST00000506787 SP7Q8TDD2 431 aaPredicted RBP19.63■□□□□ 0.73
UBE2B-205ENST00000506787 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
UBE2B-205ENST00000506787 ABCC8Q09428 1581 aa19.6■□□□□ 0.73
UBE2B-205ENST00000506787 DNMBPQ6XZF7 1577 aa19.58■□□□□ 0.73
UBE2B-205ENST00000506787 PIP4P2Q8N4L2 257 aa19.54■□□□□ 0.72
UBE2B-205ENST00000506787 CCDC88BA6NC98 1476 aa19.5■□□□□ 0.71
UBE2B-205ENST00000506787 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
UBE2B-205ENST00000506787 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
UBE2B-205ENST00000506787 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
UBE2B-205ENST00000506787 SYNJ1O43426 1573 aa19.47■□□□□ 0.71
UBE2B-205ENST00000506787 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
UBE2B-205ENST00000506787 ILDR1Q86SU0 546 aaPredicted RBP19.45■□□□□ 0.7
UBE2B-205ENST00000506787 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
UBE2B-205ENST00000506787 PITPNM1O00562 1244 aa19.43■□□□□ 0.7
UBE2B-205ENST00000506787 CHMP7Q8WUX9 453 aaPredicted RBP19.43■□□□□ 0.7
UBE2B-205ENST00000506787 SOGA1O94964 1423 aa19.38■□□□□ 0.69
UBE2B-205ENST00000506787 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
UBE2B-205ENST00000506787 FXR2P51116 673 aaKnown RBP eCLIP19.37■□□□□ 0.69
UBE2B-205ENST00000506787 ZBTB22O15209 634 aa19.35■□□□□ 0.69
UBE2B-205ENST00000506787 ATXN8OSP0DMR3 200 aa19.34■□□□□ 0.69
UBE2B-205ENST00000506787 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
UBE2B-205ENST00000506787 WDR97A6NE52 1622 aa19.33■□□□□ 0.68
UBE2B-205ENST00000506787 HAX1O00165 279 aa19.31■□□□□ 0.68
UBE2B-205ENST00000506787 GRIN2BQ13224 1484 aa19.29■□□□□ 0.68
UBE2B-205ENST00000506787 ERCC6L2Q5T890 1561 aa19.27■□□□□ 0.68
UBE2B-205ENST00000506787 FGD5Q6ZNL6 1462 aa19.25■□□□□ 0.67
UBE2B-205ENST00000506787 KIF13AQ9H1H9 1805 aa19.23■□□□□ 0.67
UBE2B-205ENST00000506787 KDM4FA0A1W2PPD8 638 aa19.23■□□□□ 0.67
UBE2B-205ENST00000506787 SPDYE2BA6NHP3 402 aa19.19■□□□□ 0.66
UBE2B-205ENST00000506787 SPDYE6P0CI01 402 aa19.19■□□□□ 0.66
UBE2B-205ENST00000506787 SPDYE2Q495Y8 402 aa19.19■□□□□ 0.66
UBE2B-205ENST00000506787 PBRM1Q86U86 1689 aa19.14■□□□□ 0.66
UBE2B-205ENST00000506787 CUX1P39880 1505 aa19.13■□□□□ 0.65
UBE2B-205ENST00000506787 CEP170Q5SW79 1584 aa19.12■□□□□ 0.65
UBE2B-205ENST00000506787 GRIN2AQ12879 1464 aa19.06■□□□□ 0.64
UBE2B-205ENST00000506787 NUP160Q12769 1436 aa19.05■□□□□ 0.64
UBE2B-205ENST00000506787 FAM69CQ0P6D2 419 aa19.04■□□□□ 0.64
UBE2B-205ENST00000506787 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
UBE2B-205ENST00000506787 ABCC10Q5T3U5 1492 aa19.03■□□□□ 0.64
UBE2B-205ENST00000506787 ABCA5Q8WWZ7 1642 aa19.03■□□□□ 0.64
UBE2B-205ENST00000506787 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
UBE2B-205ENST00000506787 EVX2Q03828 476 aa18.98■□□□□ 0.63
UBE2B-205ENST00000506787 KDM6BO15054 1643 aa18.98■□□□□ 0.63
UBE2B-205ENST00000506787 SPDYE1Q8NFV5 336 aaPredicted RBP18.97■□□□□ 0.63
UBE2B-205ENST00000506787 DIP2BQ9P265 1576 aa18.96■□□□□ 0.63
UBE2B-205ENST00000506787 ADAMTS12P58397 1594 aa18.94■□□□□ 0.62
UBE2B-205ENST00000506787 PRKAR2AP13861 404 aaKnown RBP18.93■□□□□ 0.62
UBE2B-205ENST00000506787 MAPKBP1O60336 1514 aa18.93■□□□□ 0.62
UBE2B-205ENST00000506787 CLEC11AQ9Y240 323 aa18.91■□□□□ 0.62
UBE2B-205ENST00000506787 PRG4Q92954 1404 aaPredicted RBP18.91■□□□□ 0.62
UBE2B-205ENST00000506787 MKRN4PQ13434 485 aaPredicted RBP18.9■□□□□ 0.62
UBE2B-205ENST00000506787 SSUH2Q9Y2M2 353 aa18.87■□□□□ 0.61
UBE2B-205ENST00000506787 ZNF692Q9BU19 519 aaPredicted RBP18.86■□□□□ 0.61
UBE2B-205ENST00000506787 FHAD1B1AJZ9 1412 aa18.85■□□□□ 0.61
UBE2B-205ENST00000506787 NPM1P06748 294 aaKnown RBP eCLIP18.85■□□□□ 0.61
UBE2B-205ENST00000506787 HECW2Q9P2P5 1572 aa18.84■□□□□ 0.61
UBE2B-205ENST00000506787 TSPOAP1O95153 1857 aa18.84■□□□□ 0.61
UBE2B-205ENST00000506787 JPH4Q96JJ6 628 aa18.83■□□□□ 0.6
UBE2B-205ENST00000506787 ADGRL1O94910 1474 aa18.83■□□□□ 0.6
UBE2B-205ENST00000506787 ADCY10Q96PN6 1610 aa18.82■□□□□ 0.6
UBE2B-205ENST00000506787 C19orf67A6NJJ6 358 aa18.77■□□□□ 0.6
UBE2B-205ENST00000506787 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
UBE2B-205ENST00000506787 ERICH3Q5RHP9 1530 aa18.72■□□□□ 0.59
UBE2B-205ENST00000506787 FBXO41Q8TF61 875 aa18.7■□□□□ 0.58
UBE2B-205ENST00000506787 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
UBE2B-205ENST00000506787 PPRC1Q5VV67 1664 aaKnown RBP18.66■□□□□ 0.58
UBE2B-205ENST00000506787 COL17A1Q9UMD9 1497 aaPredicted RBP18.64■□□□□ 0.57
UBE2B-205ENST00000506787 GABBR2O75899 941 aa18.59■□□□□ 0.57
UBE2B-205ENST00000506787 TOP2BQ02880 1626 aa18.57■□□□□ 0.56
UBE2B-205ENST00000506787 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
UBE2B-205ENST00000506787 GLI2P10070 1586 aa18.57■□□□□ 0.56
UBE2B-205ENST00000506787 PRR29P0C7W0 189 aa18.57■□□□□ 0.56
UBE2B-205ENST00000506787 CHADLQ6NUI6 762 aa18.57■□□□□ 0.56
UBE2B-205ENST00000506787 ASXL2Q76L83 1435 aa18.54■□□□□ 0.56
UBE2B-205ENST00000506787 ABCC2Q92887 1545 aa18.52■□□□□ 0.56
UBE2B-205ENST00000506787 KIAA0586Q9BVV6 1533 aa18.51■□□□□ 0.55
UBE2B-205ENST00000506787 PLB1Q6P1J6 1458 aa18.51■□□□□ 0.55
UBE2B-205ENST00000506787 PTPRGP23470 1445 aa18.49■□□□□ 0.55
UBE2B-205ENST00000506787 LMTK3Q96Q04 1460 aa18.46■□□□□ 0.54
UBE2B-205ENST00000506787 MAP3K4Q9Y6R4 1608 aa18.45■□□□□ 0.54
UBE2B-205ENST00000506787 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
UBE2B-205ENST00000506787 EPRSP07814 1512 aaKnown RBP18.44■□□□□ 0.54
UBE2B-205ENST00000506787 CUL7Q14999 1698 aa18.41■□□□□ 0.54
UBE2B-205ENST00000506787 TEX14Q8IWB6 1497 aa18.41■□□□□ 0.54
UBE2B-205ENST00000506787 LHX8Q68G74 356 aa18.39■□□□□ 0.53
UBE2B-205ENST00000506787 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
UBE2B-205ENST00000506787 UHRF1BP1LA0JNW5 1464 aa18.39■□□□□ 0.53
UBE2B-205ENST00000506787 UACAQ9BZF9 1416 aa18.33■□□□□ 0.53
UBE2B-205ENST00000506787 IGF1RP08069 1367 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms