RNA–Protein interactions for RNA: ENST00000505441.1

GRAMD2B-205, Transcript of GRAM domain containing 2B, humanhuman

TSL 3

Gene GRAMD2B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-205ENST00000505441 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
GRAMD2B-205ENST00000505441 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
GRAMD2B-205ENST00000505441 MAGI1Q96QZ7 1491 aaPredicted RBP13.97□□□□□ -0.17
GRAMD2B-205ENST00000505441 CLASP1Q7Z460 1538 aa13.96□□□□□ -0.17
GRAMD2B-205ENST00000505441 CHMP7Q8WUX9 453 aaPredicted RBP13.96□□□□□ -0.17
GRAMD2B-205ENST00000505441 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
GRAMD2B-205ENST00000505441 SYNJ1O43426 1573 aa13.93□□□□□ -0.18
GRAMD2B-205ENST00000505441 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
GRAMD2B-205ENST00000505441 PBRM1Q86U86 1689 aa13.92□□□□□ -0.18
GRAMD2B-205ENST00000505441 CAPN15O75808 1086 aa13.91□□□□□ -0.18
GRAMD2B-205ENST00000505441 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
GRAMD2B-205ENST00000505441 ABCA10Q8WWZ4 1543 aa13.9□□□□□ -0.18
GRAMD2B-205ENST00000505441 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
GRAMD2B-205ENST00000505441 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
GRAMD2B-205ENST00000505441 ABCA5Q8WWZ7 1642 aa13.89□□□□□ -0.19
GRAMD2B-205ENST00000505441 WRNQ14191 1432 aaPredicted RBP eCLIP13.84□□□□□ -0.19
GRAMD2B-205ENST00000505441 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
GRAMD2B-205ENST00000505441 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
GRAMD2B-205ENST00000505441 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
GRAMD2B-205ENST00000505441 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
GRAMD2B-205ENST00000505441 DSG3P32926 999 aa13.77□□□□□ -0.21
GRAMD2B-205ENST00000505441 CEP170Q5SW79 1584 aa13.77□□□□□ -0.21
GRAMD2B-205ENST00000505441 ERCC6L2Q5T890 1561 aa13.77□□□□□ -0.21
GRAMD2B-205ENST00000505441 NUP160Q12769 1436 aa13.76□□□□□ -0.21
GRAMD2B-205ENST00000505441 FHAD1B1AJZ9 1412 aa13.74□□□□□ -0.21
GRAMD2B-205ENST00000505441 ERICH3Q5RHP9 1530 aa13.72□□□□□ -0.21
GRAMD2B-205ENST00000505441 SHROOM2Q13796 1616 aa13.7□□□□□ -0.22
GRAMD2B-205ENST00000505441 APLP2Q06481 763 aa13.67□□□□□ -0.22
GRAMD2B-205ENST00000505441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
GRAMD2B-205ENST00000505441 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
GRAMD2B-205ENST00000505441 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
GRAMD2B-205ENST00000505441 JPH4Q96JJ6 628 aa13.61□□□□□ -0.23
GRAMD2B-205ENST00000505441 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
GRAMD2B-205ENST00000505441 ABCB7O75027 752 aa13.6□□□□□ -0.23
GRAMD2B-205ENST00000505441 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
GRAMD2B-205ENST00000505441 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
GRAMD2B-205ENST00000505441 IGF1RP08069 1367 aa13.56□□□□□ -0.24
GRAMD2B-205ENST00000505441 KIF13AQ9H1H9 1805 aa13.54□□□□□ -0.24
GRAMD2B-205ENST00000505441 KIF27Q86VH2 1401 aa13.53□□□□□ -0.24
GRAMD2B-205ENST00000505441 KIAA0586Q9BVV6 1533 aa13.52□□□□□ -0.25
GRAMD2B-205ENST00000505441 CUL7Q14999 1698 aa13.51□□□□□ -0.25
GRAMD2B-205ENST00000505441 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
GRAMD2B-205ENST00000505441 ADCY10Q96PN6 1610 aa13.49□□□□□ -0.25
GRAMD2B-205ENST00000505441 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
GRAMD2B-205ENST00000505441 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
GRAMD2B-205ENST00000505441 ABCC10Q5T3U5 1492 aa13.46□□□□□ -0.25
GRAMD2B-205ENST00000505441 CARMIL1Q5VZK9 1371 aa13.45□□□□□ -0.26
GRAMD2B-205ENST00000505441 MAPKBP1O60336 1514 aa13.45□□□□□ -0.26
GRAMD2B-205ENST00000505441 FAM69CQ0P6D2 419 aa13.45□□□□□ -0.26
GRAMD2B-205ENST00000505441 DIP2BQ9P265 1576 aa13.43□□□□□ -0.26
GRAMD2B-205ENST00000505441 PTPRGP23470 1445 aa13.4□□□□□ -0.26
GRAMD2B-205ENST00000505441 TTBK1Q5TCY1 1321 aaPredicted RBP13.39□□□□□ -0.27
GRAMD2B-205ENST00000505441 IQGAP2Q13576 1575 aa13.38□□□□□ -0.27
GRAMD2B-205ENST00000505441 TNIKQ9UKE5 1360 aa13.37□□□□□ -0.27
GRAMD2B-205ENST00000505441 CARMIL2Q6F5E8 1435 aa13.37□□□□□ -0.27
GRAMD2B-205ENST00000505441 TSPOAP1O95153 1857 aa13.35□□□□□ -0.27
GRAMD2B-205ENST00000505441 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
GRAMD2B-205ENST00000505441 ABCC2Q92887 1545 aa13.34□□□□□ -0.27
GRAMD2B-205ENST00000505441 DISP1Q96F81 1524 aa13.34□□□□□ -0.27
GRAMD2B-205ENST00000505441 RAPGEF2Q9Y4G8 1499 aa13.33□□□□□ -0.28
GRAMD2B-205ENST00000505441 KDM6BO15054 1643 aa13.32□□□□□ -0.28
GRAMD2B-205ENST00000505441 ASXL2Q76L83 1435 aa13.31□□□□□ -0.28
GRAMD2B-205ENST00000505441 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
GRAMD2B-205ENST00000505441 UACAQ9BZF9 1416 aa13.3□□□□□ -0.28
GRAMD2B-205ENST00000505441 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
GRAMD2B-205ENST00000505441 POLA2Q14181 598 aa13.28□□□□□ -0.28
GRAMD2B-205ENST00000505441 PLB1Q6P1J6 1458 aa13.28□□□□□ -0.28
GRAMD2B-205ENST00000505441 KIAA0556O60303 1618 aa13.27□□□□□ -0.29
GRAMD2B-205ENST00000505441 PPRC1Q5VV67 1664 aaKnown RBP13.26□□□□□ -0.29
GRAMD2B-205ENST00000505441 GLI2P10070 1586 aa13.25□□□□□ -0.29
GRAMD2B-205ENST00000505441 KDM5BQ9UGL1 1544 aa13.25□□□□□ -0.29
GRAMD2B-205ENST00000505441 KDM4FA0A1W2PPD8 638 aa13.23□□□□□ -0.29
GRAMD2B-205ENST00000505441 POTEHQ6S545 545 aa13.23□□□□□ -0.29
GRAMD2B-205ENST00000505441 ZCCHC11Q5TAX3 1644 aaKnown RBP13.23□□□□□ -0.29
GRAMD2B-205ENST00000505441 EPRSP07814 1512 aaKnown RBP13.23□□□□□ -0.29
GRAMD2B-205ENST00000505441 CTTNBP2Q8WZ74 1663 aa13.22□□□□□ -0.29
GRAMD2B-205ENST00000505441 MAP3K4Q9Y6R4 1608 aa13.2□□□□□ -0.3
GRAMD2B-205ENST00000505441 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
GRAMD2B-205ENST00000505441 PRXQ9BXM0 1461 aa13.18□□□□□ -0.3
GRAMD2B-205ENST00000505441 COL17A1Q9UMD9 1497 aaPredicted RBP13.18□□□□□ -0.3
GRAMD2B-205ENST00000505441 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
GRAMD2B-205ENST00000505441 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
GRAMD2B-205ENST00000505441 ABCA8O94911 1581 aa13.15□□□□□ -0.3
GRAMD2B-205ENST00000505441 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
GRAMD2B-205ENST00000505441 TEX14Q8IWB6 1497 aa13.14□□□□□ -0.31
GRAMD2B-205ENST00000505441 ZBTB22O15209 634 aa13.13□□□□□ -0.31
GRAMD2B-205ENST00000505441 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
GRAMD2B-205ENST00000505441 KCNH8Q96L42 1107 aa13.1□□□□□ -0.31
GRAMD2B-205ENST00000505441 P3H3Q8IVL6 736 aa13.09□□□□□ -0.31
GRAMD2B-205ENST00000505441 CD109Q6YHK3 1445 aa13.08□□□□□ -0.32
GRAMD2B-205ENST00000505441 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.32
GRAMD2B-205ENST00000505441 MAGI3Q5TCQ9 1506 aa13.08□□□□□ -0.32
GRAMD2B-205ENST00000505441 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
GRAMD2B-205ENST00000505441 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
GRAMD2B-205ENST00000505441 ATP10BO94823 1461 aa13.04□□□□□ -0.32
GRAMD2B-205ENST00000505441 SAMD9Q5K651 1589 aa13.04□□□□□ -0.32
GRAMD2B-205ENST00000505441 FAM9AQ8IZU1 332 aaPredicted RBP13□□□□□ -0.33
GRAMD2B-205ENST00000505441 RAPGEF6Q8TEU7 1601 aa12.99□□□□□ -0.33
GRAMD2B-205ENST00000505441 RANGAP1P46060 587 aaPredicted RBP12.99□□□□□ -0.33
GRAMD2B-205ENST00000505441 ABCA9Q8IUA7 1624 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms