RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 AKT1S1Q96B36 256 aa15.96■□□□□ 0.15
CDH6-202ENST00000504835 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
CDH6-202ENST00000504835 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
CDH6-202ENST00000504835 CHD1O14646 1710 aa15.93■□□□□ 0.14
CDH6-202ENST00000504835 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
CDH6-202ENST00000504835 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
CDH6-202ENST00000504835 ARHGEF11O15085 1522 aa15.89■□□□□ 0.13
CDH6-202ENST00000504835 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
CDH6-202ENST00000504835 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.13
CDH6-202ENST00000504835 POLA1P09884 1462 aaPredicted RBP15.84■□□□□ 0.13
CDH6-202ENST00000504835 ATF5Q9Y2D1 282 aaPredicted RBP15.83■□□□□ 0.12
CDH6-202ENST00000504835 SP7Q8TDD2 431 aaPredicted RBP15.79■□□□□ 0.12
CDH6-202ENST00000504835 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
CDH6-202ENST00000504835 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.11
CDH6-202ENST00000504835 ARAP1Q96P48 1450 aa15.74■□□□□ 0.11
CDH6-202ENST00000504835 WDR97A6NE52 1622 aa15.73■□□□□ 0.11
CDH6-202ENST00000504835 FGD5Q6ZNL6 1462 aa15.72■□□□□ 0.11
CDH6-202ENST00000504835 CUX1P39880 1505 aa15.72■□□□□ 0.11
CDH6-202ENST00000504835 SOGA1O94964 1423 aa15.72■□□□□ 0.11
CDH6-202ENST00000504835 TDRD9Q8NDG6 1382 aaKnown RBP15.7■□□□□ 0.1
CDH6-202ENST00000504835 CYB5RLQ6IPT4 315 aa15.7■□□□□ 0.1
CDH6-202ENST00000504835 SNAPC4Q5SXM2 1469 aa15.7■□□□□ 0.1
CDH6-202ENST00000504835 CLASP1Q7Z460 1538 aa15.69■□□□□ 0.1
CDH6-202ENST00000504835 PIP4P2Q8N4L2 257 aa15.69■□□□□ 0.1
CDH6-202ENST00000504835 FBLN2P98095 1184 aa15.67■□□□□ 0.1
CDH6-202ENST00000504835 PBRM1Q86U86 1689 aa15.66■□□□□ 0.1
CDH6-202ENST00000504835 MAGI1Q96QZ7 1491 aaPredicted RBP15.63■□□□□ 0.09
CDH6-202ENST00000504835 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
CDH6-202ENST00000504835 GRIN2BQ13224 1484 aa15.6■□□□□ 0.09
CDH6-202ENST00000504835 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
CDH6-202ENST00000504835 ABCA5Q8WWZ7 1642 aa15.59■□□□□ 0.09
CDH6-202ENST00000504835 SYNJ2O15056 1496 aa15.58■□□□□ 0.08
CDH6-202ENST00000504835 HAX1O00165 279 aa15.57■□□□□ 0.08
CDH6-202ENST00000504835 FXR2P51116 673 aaKnown RBP eCLIP15.55■□□□□ 0.08
CDH6-202ENST00000504835 GAPVD1Q14C86 1478 aa15.55■□□□□ 0.08
CDH6-202ENST00000504835 CHMP7Q8WUX9 453 aaPredicted RBP15.54■□□□□ 0.08
CDH6-202ENST00000504835 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
CDH6-202ENST00000504835 ATXN8OSP0DMR3 200 aa15.5■□□□□ 0.07
CDH6-202ENST00000504835 BIVM-ERCC5R4GMW8 1640 aa15.49■□□□□ 0.07
CDH6-202ENST00000504835 ADAMTS12P58397 1594 aa15.46■□□□□ 0.07
CDH6-202ENST00000504835 ERCC6L2Q5T890 1561 aa15.46■□□□□ 0.07
CDH6-202ENST00000504835 TOP2BQ02880 1626 aa15.44■□□□□ 0.06
CDH6-202ENST00000504835 CEP170Q5SW79 1584 aa15.43■□□□□ 0.06
CDH6-202ENST00000504835 GRIN2AQ12879 1464 aa15.43■□□□□ 0.06
CDH6-202ENST00000504835 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
CDH6-202ENST00000504835 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
CDH6-202ENST00000504835 SPDYE2Q495Y8 402 aa15.43■□□□□ 0.06
CDH6-202ENST00000504835 SUPT5HO00267 1087 aaKnown RBP15.42■□□□□ 0.06
CDH6-202ENST00000504835 ZBTB22O15209 634 aa15.42■□□□□ 0.06
CDH6-202ENST00000504835 SHROOM2Q13796 1616 aa15.4■□□□□ 0.06
CDH6-202ENST00000504835 WRNQ14191 1432 aaPredicted RBP eCLIP15.39■□□□□ 0.05
CDH6-202ENST00000504835 NUP160Q12769 1436 aa15.38■□□□□ 0.05
CDH6-202ENST00000504835 ERICH3Q5RHP9 1530 aa15.34■□□□□ 0.05
CDH6-202ENST00000504835 FHAD1B1AJZ9 1412 aa15.33■□□□□ 0.05
CDH6-202ENST00000504835 KIF13AQ9H1H9 1805 aa15.31■□□□□ 0.04
CDH6-202ENST00000504835 SPDYE1Q8NFV5 336 aaPredicted RBP15.27■□□□□ 0.03
CDH6-202ENST00000504835 RUSC2Q8N2Y8 1516 aa15.25■□□□□ 0.03
CDH6-202ENST00000504835 CLEC11AQ9Y240 323 aa15.23■□□□□ 0.03
CDH6-202ENST00000504835 PRKAR2AP13861 404 aaKnown RBP15.22■□□□□ 0.03
CDH6-202ENST00000504835 PRG4Q92954 1404 aaPredicted RBP15.21■□□□□ 0.03
CDH6-202ENST00000504835 EVX2Q03828 476 aa15.2■□□□□ 0.02
CDH6-202ENST00000504835 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
CDH6-202ENST00000504835 ZNF692Q9BU19 519 aaPredicted RBP15.16■□□□□ 0.02
CDH6-202ENST00000504835 ADCY10Q96PN6 1610 aa15.15■□□□□ 0.02
CDH6-202ENST00000504835 CUL7Q14999 1698 aa15.13■□□□□ 0.01
CDH6-202ENST00000504835 SSUH2Q9Y2M2 353 aa15.12■□□□□ 0.01
CDH6-202ENST00000504835 MAPKBP1O60336 1514 aa15.1■□□□□ 0.01
CDH6-202ENST00000504835 DIP2BQ9P265 1576 aa15.1■□□□□ 0.01
CDH6-202ENST00000504835 MKRN4PQ13434 485 aaPredicted RBP15.1■□□□□ 0.01
CDH6-202ENST00000504835 IGF1RP08069 1367 aa15.08■□□□□ 0
CDH6-202ENST00000504835 ABCC10Q5T3U5 1492 aa15.08■□□□□ 0
CDH6-202ENST00000504835 KIAA0586Q9BVV6 1533 aa15.08■□□□□ 0
CDH6-202ENST00000504835 C19orf67A6NJJ6 358 aa15.06■□□□□ 0
CDH6-202ENST00000504835 TSPOAP1O95153 1857 aa15.06■□□□□ 0
CDH6-202ENST00000504835 KIF27Q86VH2 1401 aa15.04■□□□□ -0
CDH6-202ENST00000504835 FAM69CQ0P6D2 419 aa15.02□□□□□ -0.01
CDH6-202ENST00000504835 KDM6BO15054 1643 aa14.97□□□□□ -0.01
CDH6-202ENST00000504835 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
CDH6-202ENST00000504835 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.01
CDH6-202ENST00000504835 PPRC1Q5VV67 1664 aaKnown RBP14.96□□□□□ -0.02
CDH6-202ENST00000504835 IQGAP2Q13576 1575 aa14.95□□□□□ -0.02
CDH6-202ENST00000504835 PRR29P0C7W0 189 aa14.94□□□□□ -0.02
CDH6-202ENST00000504835 GABBR2O75899 941 aa14.94□□□□□ -0.02
CDH6-202ENST00000504835 PTPRGP23470 1445 aa14.93□□□□□ -0.02
CDH6-202ENST00000504835 ABCC2Q92887 1545 aa14.91□□□□□ -0.02
CDH6-202ENST00000504835 DISP1Q96F81 1524 aa14.9□□□□□ -0.02
CDH6-202ENST00000504835 CHADLQ6NUI6 762 aa14.9□□□□□ -0.02
CDH6-202ENST00000504835 TNIKQ9UKE5 1360 aa14.9□□□□□ -0.02
CDH6-202ENST00000504835 CARMIL2Q6F5E8 1435 aa14.88□□□□□ -0.03
CDH6-202ENST00000504835 GLI2P10070 1586 aa14.88□□□□□ -0.03
CDH6-202ENST00000504835 UHRF1BP1LA0JNW5 1464 aa14.88□□□□□ -0.03
CDH6-202ENST00000504835 TTBK1Q5TCY1 1321 aaPredicted RBP14.87□□□□□ -0.03
CDH6-202ENST00000504835 ASXL2Q76L83 1435 aa14.86□□□□□ -0.03
CDH6-202ENST00000504835 UGGT2Q9NYU1 1516 aa14.86□□□□□ -0.03
CDH6-202ENST00000504835 KIAA0556O60303 1618 aa14.85□□□□□ -0.03
CDH6-202ENST00000504835 ZCCHC11Q5TAX3 1644 aaKnown RBP14.85□□□□□ -0.03
CDH6-202ENST00000504835 CTTNBP2Q8WZ74 1663 aa14.84□□□□□ -0.03
CDH6-202ENST00000504835 KDM4FA0A1W2PPD8 638 aa14.84□□□□□ -0.03
CDH6-202ENST00000504835 MAP3K4Q9Y6R4 1608 aa14.84□□□□□ -0.03
CDH6-202ENST00000504835 PLB1Q6P1J6 1458 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms