RNA–Protein interactions for RNA: ENST00000504823.5

FAM200B-208, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 3

Gene FAM200B, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-208ENST00000504823 ARHGEF11O15085 1522 aa18.47■□□□□ 0.55
FAM200B-208ENST00000504823 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
FAM200B-208ENST00000504823 AQRO60306 1485 aaKnown RBP eCLIP18.35■□□□□ 0.53
FAM200B-208ENST00000504823 POLA1P09884 1462 aaPredicted RBP18.34■□□□□ 0.53
FAM200B-208ENST00000504823 CHD1O14646 1710 aa18.34■□□□□ 0.53
FAM200B-208ENST00000504823 ATF5Q9Y2D1 282 aaPredicted RBP18.31■□□□□ 0.52
FAM200B-208ENST00000504823 WDR97A6NE52 1622 aa18.29■□□□□ 0.52
FAM200B-208ENST00000504823 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
FAM200B-208ENST00000504823 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.52
FAM200B-208ENST00000504823 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
FAM200B-208ENST00000504823 SOGA1O94964 1423 aa18.23■□□□□ 0.51
FAM200B-208ENST00000504823 POLA2Q14181 598 aa18.23■□□□□ 0.51
FAM200B-208ENST00000504823 TDRD9Q8NDG6 1382 aaKnown RBP18.19■□□□□ 0.5
FAM200B-208ENST00000504823 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
FAM200B-208ENST00000504823 FBLN2P98095 1184 aa18.19■□□□□ 0.5
FAM200B-208ENST00000504823 FGD5Q6ZNL6 1462 aa18.18■□□□□ 0.5
FAM200B-208ENST00000504823 SNAPC4Q5SXM2 1469 aa18.17■□□□□ 0.5
FAM200B-208ENST00000504823 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
FAM200B-208ENST00000504823 CUX1P39880 1505 aa18.14■□□□□ 0.49
FAM200B-208ENST00000504823 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
FAM200B-208ENST00000504823 GRIN2BQ13224 1484 aa18.13■□□□□ 0.49
FAM200B-208ENST00000504823 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
FAM200B-208ENST00000504823 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
FAM200B-208ENST00000504823 ATXN8OSP0DMR3 200 aa18.06■□□□□ 0.48
FAM200B-208ENST00000504823 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
FAM200B-208ENST00000504823 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
FAM200B-208ENST00000504823 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
FAM200B-208ENST00000504823 ABCA5Q8WWZ7 1642 aa18■□□□□ 0.47
FAM200B-208ENST00000504823 RBM42Q9BTD8 480 aaKnown RBP17.89■□□□□ 0.45
FAM200B-208ENST00000504823 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
FAM200B-208ENST00000504823 ZBTB12Q9Y330 459 aaPredicted RBP17.88■□□□□ 0.45
FAM200B-208ENST00000504823 NUP160Q12769 1436 aa17.86■□□□□ 0.45
FAM200B-208ENST00000504823 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
FAM200B-208ENST00000504823 ADAMTS12P58397 1594 aa17.86■□□□□ 0.45
FAM200B-208ENST00000504823 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
FAM200B-208ENST00000504823 BIVM-ERCC5R4GMW8 1640 aa17.84■□□□□ 0.45
FAM200B-208ENST00000504823 TOP2BQ02880 1626 aa17.83■□□□□ 0.44
FAM200B-208ENST00000504823 CEP170Q5SW79 1584 aa17.83■□□□□ 0.44
FAM200B-208ENST00000504823 ERCC6L2Q5T890 1561 aa17.83■□□□□ 0.44
FAM200B-208ENST00000504823 SHROOM2Q13796 1616 aa17.82■□□□□ 0.44
FAM200B-208ENST00000504823 FHAD1B1AJZ9 1412 aa17.81■□□□□ 0.44
FAM200B-208ENST00000504823 ERICH3Q5RHP9 1530 aa17.79■□□□□ 0.44
FAM200B-208ENST00000504823 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
FAM200B-208ENST00000504823 SUPT5HO00267 1087 aaKnown RBP17.7■□□□□ 0.42
FAM200B-208ENST00000504823 PRG4Q92954 1404 aaPredicted RBP17.65■□□□□ 0.42
FAM200B-208ENST00000504823 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
FAM200B-208ENST00000504823 RUSC2Q8N2Y8 1516 aa17.62■□□□□ 0.41
FAM200B-208ENST00000504823 JPH4Q96JJ6 628 aa17.62■□□□□ 0.41
FAM200B-208ENST00000504823 POTEHQ6S545 545 aa17.59■□□□□ 0.41
FAM200B-208ENST00000504823 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
FAM200B-208ENST00000504823 ABCC10Q5T3U5 1492 aa17.56■□□□□ 0.4
FAM200B-208ENST00000504823 AKT1S1Q96B36 256 aa17.53■□□□□ 0.4
FAM200B-208ENST00000504823 KIAA0586Q9BVV6 1533 aa17.51■□□□□ 0.39
FAM200B-208ENST00000504823 ADCY10Q96PN6 1610 aa17.5■□□□□ 0.39
FAM200B-208ENST00000504823 DIP2BQ9P265 1576 aa17.5■□□□□ 0.39
FAM200B-208ENST00000504823 NPM1P06748 294 aaKnown RBP eCLIP17.49■□□□□ 0.39
FAM200B-208ENST00000504823 FAM69CQ0P6D2 419 aa17.48■□□□□ 0.39
FAM200B-208ENST00000504823 MKRN4PQ13434 485 aaPredicted RBP17.48■□□□□ 0.39
FAM200B-208ENST00000504823 IGF1RP08069 1367 aa17.48■□□□□ 0.39
FAM200B-208ENST00000504823 CUL7Q14999 1698 aa17.48■□□□□ 0.39
FAM200B-208ENST00000504823 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
FAM200B-208ENST00000504823 CHRDL2Q6WN34 429 aa17.41■□□□□ 0.38
FAM200B-208ENST00000504823 KDM6BO15054 1643 aa17.38■□□□□ 0.37
FAM200B-208ENST00000504823 REM2Q8IYK8 340 aaPredicted RBP17.37■□□□□ 0.37
FAM200B-208ENST00000504823 SPDYE2BA6NHP3 402 aa17.35■□□□□ 0.37
FAM200B-208ENST00000504823 SPDYE6P0CI01 402 aa17.35■□□□□ 0.37
FAM200B-208ENST00000504823 SPDYE2Q495Y8 402 aa17.35■□□□□ 0.37
FAM200B-208ENST00000504823 PTPRGP23470 1445 aa17.34■□□□□ 0.37
FAM200B-208ENST00000504823 CARMIL1Q5VZK9 1371 aa17.33■□□□□ 0.36
FAM200B-208ENST00000504823 ABCC2Q92887 1545 aa17.32■□□□□ 0.36
FAM200B-208ENST00000504823 CARMIL2Q6F5E8 1435 aa17.32■□□□□ 0.36
FAM200B-208ENST00000504823 TNIKQ9UKE5 1360 aa17.32■□□□□ 0.36
FAM200B-208ENST00000504823 GLI2P10070 1586 aa17.31■□□□□ 0.36
FAM200B-208ENST00000504823 UHRF1BP1LA0JNW5 1464 aa17.3■□□□□ 0.36
FAM200B-208ENST00000504823 KDM4FA0A1W2PPD8 638 aa17.29■□□□□ 0.36
FAM200B-208ENST00000504823 TSPOAP1O95153 1857 aa17.29■□□□□ 0.36
FAM200B-208ENST00000504823 IQGAP2Q13576 1575 aa17.28■□□□□ 0.36
FAM200B-208ENST00000504823 PLB1Q6P1J6 1458 aa17.28■□□□□ 0.36
FAM200B-208ENST00000504823 ASXL2Q76L83 1435 aa17.25■□□□□ 0.35
FAM200B-208ENST00000504823 PPRC1Q5VV67 1664 aaKnown RBP17.25■□□□□ 0.35
FAM200B-208ENST00000504823 DISP1Q96F81 1524 aa17.24■□□□□ 0.35
FAM200B-208ENST00000504823 UACAQ9BZF9 1416 aa17.23■□□□□ 0.35
FAM200B-208ENST00000504823 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
FAM200B-208ENST00000504823 UGGT2Q9NYU1 1516 aa17.21■□□□□ 0.34
FAM200B-208ENST00000504823 KDM5BQ9UGL1 1544 aa17.21■□□□□ 0.34
FAM200B-208ENST00000504823 EPRSP07814 1512 aaKnown RBP17.17■□□□□ 0.34
FAM200B-208ENST00000504823 ZNF692Q9BU19 519 aaPredicted RBP17.17■□□□□ 0.34
FAM200B-208ENST00000504823 SSUH2Q9Y2M2 353 aa17.17■□□□□ 0.34
FAM200B-208ENST00000504823 MAP3K4Q9Y6R4 1608 aa17.17■□□□□ 0.34
FAM200B-208ENST00000504823 RAPGEF2Q9Y4G8 1499 aa17.17■□□□□ 0.34
FAM200B-208ENST00000504823 TTBK1Q5TCY1 1321 aaPredicted RBP17.15■□□□□ 0.34
FAM200B-208ENST00000504823 KIAA0556O60303 1618 aa17.14■□□□□ 0.33
FAM200B-208ENST00000504823 ZCCHC11Q5TAX3 1644 aaKnown RBP17.14■□□□□ 0.33
FAM200B-208ENST00000504823 TEX14Q8IWB6 1497 aa17.13■□□□□ 0.33
FAM200B-208ENST00000504823 COL17A1Q9UMD9 1497 aaPredicted RBP17.12■□□□□ 0.33
FAM200B-208ENST00000504823 ADGRL1O94910 1474 aa17.11■□□□□ 0.33
FAM200B-208ENST00000504823 WDR7Q9Y4E6 1490 aa17.06■□□□□ 0.32
FAM200B-208ENST00000504823 PIP4P2Q8N4L2 257 aa17.06■□□□□ 0.32
FAM200B-208ENST00000504823 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
FAM200B-208ENST00000504823 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms