RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 ZNF608Q9ULD9 1512 aaPredicted RBP16.03■□□□□ 0.16
SSBP2-202ENST00000504136 POLA1P09884 1462 aaPredicted RBP16.02■□□□□ 0.15
SSBP2-202ENST00000504136 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
SSBP2-202ENST00000504136 CUX1P39880 1505 aa15.98■□□□□ 0.15
SSBP2-202ENST00000504136 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
SSBP2-202ENST00000504136 SUPT5HO00267 1087 aaKnown RBP15.95■□□□□ 0.14
SSBP2-202ENST00000504136 FGD5Q6ZNL6 1462 aa15.92■□□□□ 0.14
SSBP2-202ENST00000504136 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
SSBP2-202ENST00000504136 SOGA1O94964 1423 aa15.89■□□□□ 0.13
SSBP2-202ENST00000504136 ZBTB12Q9Y330 459 aaPredicted RBP15.89■□□□□ 0.13
SSBP2-202ENST00000504136 RAD54L2Q9Y4B4 1467 aa15.89■□□□□ 0.13
SSBP2-202ENST00000504136 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.13
SSBP2-202ENST00000504136 MKRN4PQ13434 485 aaPredicted RBP15.84■□□□□ 0.13
SSBP2-202ENST00000504136 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.13
SSBP2-202ENST00000504136 CHD1O14646 1710 aa15.82■□□□□ 0.12
SSBP2-202ENST00000504136 ABCA10Q8WWZ4 1543 aa15.82■□□□□ 0.12
SSBP2-202ENST00000504136 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
SSBP2-202ENST00000504136 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
SSBP2-202ENST00000504136 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
SSBP2-202ENST00000504136 TDRD9Q8NDG6 1382 aaKnown RBP15.79■□□□□ 0.12
SSBP2-202ENST00000504136 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
SSBP2-202ENST00000504136 SNAPC4Q5SXM2 1469 aa15.77■□□□□ 0.11
SSBP2-202ENST00000504136 WRNQ14191 1432 aaPredicted RBP eCLIP15.77■□□□□ 0.11
SSBP2-202ENST00000504136 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
SSBP2-202ENST00000504136 FBLN2P98095 1184 aa15.76■□□□□ 0.11
SSBP2-202ENST00000504136 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
SSBP2-202ENST00000504136 RIMBP3CA6NJZ7 1639 aa15.75■□□□□ 0.11
SSBP2-202ENST00000504136 RIMBP3BA6NNM3 1639 aa15.75■□□□□ 0.11
SSBP2-202ENST00000504136 RIMBP3Q9UFD9 1639 aa15.75■□□□□ 0.11
SSBP2-202ENST00000504136 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
SSBP2-202ENST00000504136 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
SSBP2-202ENST00000504136 SYNJ2O15056 1496 aa15.71■□□□□ 0.11
SSBP2-202ENST00000504136 CLASP1Q7Z460 1538 aa15.7■□□□□ 0.1
SSBP2-202ENST00000504136 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
SSBP2-202ENST00000504136 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
SSBP2-202ENST00000504136 ADAMTS12P58397 1594 aa15.63■□□□□ 0.09
SSBP2-202ENST00000504136 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
SSBP2-202ENST00000504136 TRIM41Q8WV44 630 aa15.59■□□□□ 0.09
SSBP2-202ENST00000504136 ARAP1Q96P48 1450 aa15.59■□□□□ 0.09
SSBP2-202ENST00000504136 GRIN2AQ12879 1464 aa15.58■□□□□ 0.08
SSBP2-202ENST00000504136 FHAD1B1AJZ9 1412 aa15.56■□□□□ 0.08
SSBP2-202ENST00000504136 NUP160Q12769 1436 aa15.56■□□□□ 0.08
SSBP2-202ENST00000504136 CEP170Q5SW79 1584 aa15.52■□□□□ 0.07
SSBP2-202ENST00000504136 SHROOM2Q13796 1616 aa15.5■□□□□ 0.07
SSBP2-202ENST00000504136 SPDYE2BA6NHP3 402 aa15.48■□□□□ 0.07
SSBP2-202ENST00000504136 SPDYE6P0CI01 402 aa15.48■□□□□ 0.07
SSBP2-202ENST00000504136 SPDYE2Q495Y8 402 aa15.48■□□□□ 0.07
SSBP2-202ENST00000504136 CUL7Q14999 1698 aa15.44■□□□□ 0.06
SSBP2-202ENST00000504136 KIF27Q86VH2 1401 aa15.44■□□□□ 0.06
SSBP2-202ENST00000504136 CYB5RLQ6IPT4 315 aa15.44■□□□□ 0.06
SSBP2-202ENST00000504136 SP7Q8TDD2 431 aaPredicted RBP15.44■□□□□ 0.06
SSBP2-202ENST00000504136 RUSC2Q8N2Y8 1516 aa15.42■□□□□ 0.06
SSBP2-202ENST00000504136 IGF1RP08069 1367 aa15.41■□□□□ 0.06
SSBP2-202ENST00000504136 CHRDL2Q6WN34 429 aa15.4■□□□□ 0.06
SSBP2-202ENST00000504136 SSUH2Q9Y2M2 353 aa15.4■□□□□ 0.06
SSBP2-202ENST00000504136 ERCC6L2Q5T890 1561 aa15.4■□□□□ 0.06
SSBP2-202ENST00000504136 AKT1S1Q96B36 256 aa15.36■□□□□ 0.05
SSBP2-202ENST00000504136 ZNF692Q9BU19 519 aaPredicted RBP15.36■□□□□ 0.05
SSBP2-202ENST00000504136 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
SSBP2-202ENST00000504136 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.05
SSBP2-202ENST00000504136 PRG4Q92954 1404 aaPredicted RBP15.29■□□□□ 0.04
SSBP2-202ENST00000504136 CARMIL1Q5VZK9 1371 aa15.29■□□□□ 0.04
SSBP2-202ENST00000504136 JPH4Q96JJ6 628 aa15.28■□□□□ 0.04
SSBP2-202ENST00000504136 FKBP8Q14318 412 aa15.25■□□□□ 0.03
SSBP2-202ENST00000504136 REM2Q8IYK8 340 aaPredicted RBP15.22■□□□□ 0.03
SSBP2-202ENST00000504136 RAPGEF2Q9Y4G8 1499 aa15.2■□□□□ 0.02
SSBP2-202ENST00000504136 IQGAP2Q13576 1575 aa15.2■□□□□ 0.02
SSBP2-202ENST00000504136 PROM2Q8N271 834 aa15.2■□□□□ 0.02
SSBP2-202ENST00000504136 ADCY10Q96PN6 1610 aa15.16■□□□□ 0.02
SSBP2-202ENST00000504136 UGGT2Q9NYU1 1516 aa15.16■□□□□ 0.02
SSBP2-202ENST00000504136 PRXQ9BXM0 1461 aa15.15■□□□□ 0.02
SSBP2-202ENST00000504136 MAPKBP1O60336 1514 aa15.14■□□□□ 0.01
SSBP2-202ENST00000504136 DISP1Q96F81 1524 aa15.12■□□□□ 0.01
SSBP2-202ENST00000504136 CTTNBP2Q8WZ74 1663 aa15.12■□□□□ 0.01
SSBP2-202ENST00000504136 CARMIL2Q6F5E8 1435 aa15.11■□□□□ 0.01
SSBP2-202ENST00000504136 KIF13AQ9H1H9 1805 aa15.11■□□□□ 0.01
SSBP2-202ENST00000504136 TNIKQ9UKE5 1360 aa15.1■□□□□ 0.01
SSBP2-202ENST00000504136 KIAA0556O60303 1618 aa15.08■□□□□ 0
SSBP2-202ENST00000504136 PTPRGP23470 1445 aa15.08■□□□□ 0
SSBP2-202ENST00000504136 UHRF1BP1LA0JNW5 1464 aa15.08■□□□□ 0
SSBP2-202ENST00000504136 PITPNM1O00562 1244 aa15.06■□□□□ 0
SSBP2-202ENST00000504136 EEA1Q15075 1411 aa15.06■□□□□ 0
SSBP2-202ENST00000504136 ABCC10Q5T3U5 1492 aa15.06■□□□□ 0
SSBP2-202ENST00000504136 DIP2BQ9P265 1576 aa15.04■□□□□ -0
SSBP2-202ENST00000504136 ABCC2Q92887 1545 aa15.03■□□□□ -0
SSBP2-202ENST00000504136 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
SSBP2-202ENST00000504136 UACAQ9BZF9 1416 aa15□□□□□ -0.01
SSBP2-202ENST00000504136 GOLGA3Q08378 1498 aa15□□□□□ -0.01
SSBP2-202ENST00000504136 KDM5BQ9UGL1 1544 aa14.99□□□□□ -0.01
SSBP2-202ENST00000504136 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
SSBP2-202ENST00000504136 ABCA8O94911 1581 aa14.95□□□□□ -0.02
SSBP2-202ENST00000504136 GLI2P10070 1586 aa14.95□□□□□ -0.02
SSBP2-202ENST00000504136 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
SSBP2-202ENST00000504136 PLB1Q6P1J6 1458 aa14.95□□□□□ -0.02
SSBP2-202ENST00000504136 SAMD9Q5K651 1589 aa14.94□□□□□ -0.02
SSBP2-202ENST00000504136 KIF21BO75037 1637 aa14.94□□□□□ -0.02
SSBP2-202ENST00000504136 ASXL2Q76L83 1435 aa14.92□□□□□ -0.02
SSBP2-202ENST00000504136 ZCCHC11Q5TAX3 1644 aaKnown RBP14.92□□□□□ -0.02
SSBP2-202ENST00000504136 CLEC11AQ9Y240 323 aa14.92□□□□□ -0.02
SSBP2-202ENST00000504136 FAM69CQ0P6D2 419 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms