RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 AEBP2Q6ZN18 517 aaPredicted RBP27.68■■■□□ 2.02
SSBP2-202ENST00000504136 CHIC1Q5VXU3 224 aa26.89■■□□□ 1.9
SSBP2-202ENST00000504136 PHF23Q9BUL5 403 aaPredicted RBP23.67■■□□□ 1.38
SSBP2-202ENST00000504136 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
SSBP2-202ENST00000504136 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
SSBP2-202ENST00000504136 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
SSBP2-202ENST00000504136 FOXD1Q16676 465 aa21.92■■□□□ 1.1
SSBP2-202ENST00000504136 PLPPR3Q6T4P5 718 aa21.74■■□□□ 1.07
SSBP2-202ENST00000504136 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
SSBP2-202ENST00000504136 ADRA2BP18089 450 aa20.84■□□□□ 0.93
SSBP2-202ENST00000504136 MSH5O43196 834 aa20.63■□□□□ 0.89
SSBP2-202ENST00000504136 PIAS4Q8N2W9 510 aaPredicted RBP20.48■□□□□ 0.87
SSBP2-202ENST00000504136 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.76
SSBP2-202ENST00000504136 ABCC9O60706 1549 aa19.4■□□□□ 0.7
SSBP2-202ENST00000504136 PPP4R3CPQ6ZMV5 832 aa19.15■□□□□ 0.66
SSBP2-202ENST00000504136 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
SSBP2-202ENST00000504136 MAPK8IP2Q13387 824 aaPredicted RBP18.94■□□□□ 0.62
SSBP2-202ENST00000504136 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
SSBP2-202ENST00000504136 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
SSBP2-202ENST00000504136 NACADO15069 1562 aa18.64■□□□□ 0.58
SSBP2-202ENST00000504136 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
SSBP2-202ENST00000504136 KCNA4P22459 653 aa18.61■□□□□ 0.57
SSBP2-202ENST00000504136 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
SSBP2-202ENST00000504136 MYO15BQ96JP2 1530 aa18.56■□□□□ 0.56
SSBP2-202ENST00000504136 ZCCHC6Q5VYS8 1495 aaKnown RBP18.41■□□□□ 0.54
SSBP2-202ENST00000504136 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.53
SSBP2-202ENST00000504136 NPM3O75607 178 aaKnown RBP18.37■□□□□ 0.53
SSBP2-202ENST00000504136 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
SSBP2-202ENST00000504136 HOXD11P31277 338 aaPredicted RBP18.32■□□□□ 0.52
SSBP2-202ENST00000504136 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
SSBP2-202ENST00000504136 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
SSBP2-202ENST00000504136 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
SSBP2-202ENST00000504136 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
SSBP2-202ENST00000504136 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
SSBP2-202ENST00000504136 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.48
SSBP2-202ENST00000504136 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
SSBP2-202ENST00000504136 SCRIBQ14160 1630 aa17.92■□□□□ 0.46
SSBP2-202ENST00000504136 DCAF8L1A6NGE4 600 aa17.78■□□□□ 0.44
SSBP2-202ENST00000504136 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
SSBP2-202ENST00000504136 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
SSBP2-202ENST00000504136 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
SSBP2-202ENST00000504136 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
SSBP2-202ENST00000504136 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
SSBP2-202ENST00000504136 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
SSBP2-202ENST00000504136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.33■□□□□ 0.36
SSBP2-202ENST00000504136 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
SSBP2-202ENST00000504136 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
SSBP2-202ENST00000504136 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
SSBP2-202ENST00000504136 ZBTB22O15209 634 aa17.16■□□□□ 0.34
SSBP2-202ENST00000504136 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
SSBP2-202ENST00000504136 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
SSBP2-202ENST00000504136 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
SSBP2-202ENST00000504136 SMARCA2P51531 1590 aa17.14■□□□□ 0.33
SSBP2-202ENST00000504136 HMGXB3Q12766 1538 aa17.13■□□□□ 0.33
SSBP2-202ENST00000504136 FOXD4L1Q9NU39 408 aa17.13■□□□□ 0.33
SSBP2-202ENST00000504136 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
SSBP2-202ENST00000504136 POTEHQ6S545 545 aa17.02■□□□□ 0.32
SSBP2-202ENST00000504136 MROH2BQ7Z745 1585 aa17.01■□□□□ 0.31
SSBP2-202ENST00000504136 EHMT2Q96KQ7 1210 aa16.99■□□□□ 0.31
SSBP2-202ENST00000504136 BAZ1BQ9UIG0 1483 aaKnown RBP16.95■□□□□ 0.3
SSBP2-202ENST00000504136 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
SSBP2-202ENST00000504136 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
SSBP2-202ENST00000504136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
SSBP2-202ENST00000504136 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
SSBP2-202ENST00000504136 WIZO95785 1651 aa16.8■□□□□ 0.28
SSBP2-202ENST00000504136 LAMC3Q9Y6N6 1575 aa16.78■□□□□ 0.28
SSBP2-202ENST00000504136 NESP48681 1621 aa16.76■□□□□ 0.27
SSBP2-202ENST00000504136 CUX2O14529 1486 aa16.75■□□□□ 0.27
SSBP2-202ENST00000504136 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
SSBP2-202ENST00000504136 RSF1Q96T23 1441 aaPredicted RBP16.74■□□□□ 0.27
SSBP2-202ENST00000504136 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
SSBP2-202ENST00000504136 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
SSBP2-202ENST00000504136 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
SSBP2-202ENST00000504136 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
SSBP2-202ENST00000504136 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.25
SSBP2-202ENST00000504136 APLP2Q06481 763 aa16.63■□□□□ 0.25
SSBP2-202ENST00000504136 PDS5BQ9NTI5 1447 aa16.61■□□□□ 0.25
SSBP2-202ENST00000504136 KIF21AQ7Z4S6 1674 aa16.6■□□□□ 0.25
SSBP2-202ENST00000504136 ATXN8OSP0DMR3 200 aa16.56■□□□□ 0.24
SSBP2-202ENST00000504136 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
SSBP2-202ENST00000504136 CAPN15O75808 1086 aa16.54■□□□□ 0.24
SSBP2-202ENST00000504136 CFTRP13569 1480 aa16.54■□□□□ 0.24
SSBP2-202ENST00000504136 WDR62O43379 1518 aa16.47■□□□□ 0.23
SSBP2-202ENST00000504136 MRC2Q9UBG0 1479 aa16.47■□□□□ 0.23
SSBP2-202ENST00000504136 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
SSBP2-202ENST00000504136 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
SSBP2-202ENST00000504136 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
SSBP2-202ENST00000504136 CEP164Q9UPV0 1460 aa16.43■□□□□ 0.22
SSBP2-202ENST00000504136 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
SSBP2-202ENST00000504136 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
SSBP2-202ENST00000504136 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.21
SSBP2-202ENST00000504136 DSG3P32926 999 aa16.38■□□□□ 0.21
SSBP2-202ENST00000504136 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
SSBP2-202ENST00000504136 ABCB7O75027 752 aa16.24■□□□□ 0.19
SSBP2-202ENST00000504136 POLA2Q14181 598 aa16.19■□□□□ 0.18
SSBP2-202ENST00000504136 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
SSBP2-202ENST00000504136 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
SSBP2-202ENST00000504136 DNMBPQ6XZF7 1577 aa16.16■□□□□ 0.18
SSBP2-202ENST00000504136 IFT140Q96RY7 1462 aa16.12■□□□□ 0.17
SSBP2-202ENST00000504136 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms