RNA–Protein interactions for RNA: ENST00000504099.5

SLF1-206, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 4

Gene SLF1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-206ENST00000504099 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
SLF1-206ENST00000504099 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
SLF1-206ENST00000504099 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
SLF1-206ENST00000504099 PRR29P0C7W0 189 aa14.38□□□□□ -0.11
SLF1-206ENST00000504099 WIZO95785 1651 aa14.27□□□□□ -0.12
SLF1-206ENST00000504099 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
SLF1-206ENST00000504099 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
SLF1-206ENST00000504099 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
SLF1-206ENST00000504099 CADPSQ9ULU8 1353 aa14.19□□□□□ -0.14
SLF1-206ENST00000504099 WDR62O43379 1518 aa14.17□□□□□ -0.14
SLF1-206ENST00000504099 EVX2Q03828 476 aa14.17□□□□□ -0.14
SLF1-206ENST00000504099 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
SLF1-206ENST00000504099 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
SLF1-206ENST00000504099 C19orf67A6NJJ6 358 aa14.11□□□□□ -0.15
SLF1-206ENST00000504099 CEP164Q9UPV0 1460 aa14.11□□□□□ -0.15
SLF1-206ENST00000504099 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
SLF1-206ENST00000504099 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
SLF1-206ENST00000504099 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
SLF1-206ENST00000504099 FARP1Q9Y4F1 1045 aaPredicted RBP14.05□□□□□ -0.16
SLF1-206ENST00000504099 CFTRP13569 1480 aa14.04□□□□□ -0.16
SLF1-206ENST00000504099 RSF1Q96T23 1441 aaPredicted RBP14.03□□□□□ -0.16
SLF1-206ENST00000504099 CD44P16070 742 aaKnown RBP13.98□□□□□ -0.17
SLF1-206ENST00000504099 URB2Q14146 1524 aaKnown RBP13.97□□□□□ -0.17
SLF1-206ENST00000504099 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
SLF1-206ENST00000504099 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
SLF1-206ENST00000504099 GABBR2O75899 941 aa13.92□□□□□ -0.18
SLF1-206ENST00000504099 CCDC88BA6NC98 1476 aa13.85□□□□□ -0.19
SLF1-206ENST00000504099 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
SLF1-206ENST00000504099 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
SLF1-206ENST00000504099 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
SLF1-206ENST00000504099 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
SLF1-206ENST00000504099 RIMBP3CA6NJZ7 1639 aa13.8□□□□□ -0.2
SLF1-206ENST00000504099 RIMBP3BA6NNM3 1639 aa13.8□□□□□ -0.2
SLF1-206ENST00000504099 RIMBP3Q9UFD9 1639 aa13.8□□□□□ -0.2
SLF1-206ENST00000504099 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
SLF1-206ENST00000504099 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
SLF1-206ENST00000504099 PAK3O75914 559 aaPredicted RBP13.79□□□□□ -0.2
SLF1-206ENST00000504099 CLCN6P51797 869 aa13.77□□□□□ -0.21
SLF1-206ENST00000504099 DNMBPQ6XZF7 1577 aa13.77□□□□□ -0.21
SLF1-206ENST00000504099 PROM2Q8N271 834 aa13.77□□□□□ -0.21
SLF1-206ENST00000504099 CHD1O14646 1710 aa13.75□□□□□ -0.21
SLF1-206ENST00000504099 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
SLF1-206ENST00000504099 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
SLF1-206ENST00000504099 ARHGEF11O15085 1522 aa13.71□□□□□ -0.21
SLF1-206ENST00000504099 ZNF579Q8NAF0 562 aaKnown RBP13.7□□□□□ -0.22
SLF1-206ENST00000504099 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
SLF1-206ENST00000504099 DCBLD2Q96PD2 775 aa13.66□□□□□ -0.22
SLF1-206ENST00000504099 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
SLF1-206ENST00000504099 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
SLF1-206ENST00000504099 AQRO60306 1485 aaKnown RBP eCLIP13.65□□□□□ -0.22
SLF1-206ENST00000504099 FKBP8Q14318 412 aa13.64□□□□□ -0.23
SLF1-206ENST00000504099 MIER1Q8N108 512 aa13.63□□□□□ -0.23
SLF1-206ENST00000504099 RAD54L2Q9Y4B4 1467 aa13.59□□□□□ -0.23
SLF1-206ENST00000504099 WDR97A6NE52 1622 aa13.58□□□□□ -0.24
SLF1-206ENST00000504099 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
SLF1-206ENST00000504099 FGD5Q6ZNL6 1462 aa13.56□□□□□ -0.24
SLF1-206ENST00000504099 ARAP1Q96P48 1450 aa13.55□□□□□ -0.24
SLF1-206ENST00000504099 GALR2O43603 387 aaPredicted RBP13.55□□□□□ -0.24
SLF1-206ENST00000504099 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
SLF1-206ENST00000504099 PLCD3Q8N3E9 789 aa13.55□□□□□ -0.24
SLF1-206ENST00000504099 SOGA1O94964 1423 aa13.55□□□□□ -0.24
SLF1-206ENST00000504099 CUX1P39880 1505 aa13.54□□□□□ -0.24
SLF1-206ENST00000504099 LHX8Q68G74 356 aa13.54□□□□□ -0.24
SLF1-206ENST00000504099 TSPYL2Q9H2G4 693 aaPredicted RBP13.54□□□□□ -0.24
SLF1-206ENST00000504099 SNAPC4Q5SXM2 1469 aa13.54□□□□□ -0.24
SLF1-206ENST00000504099 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
SLF1-206ENST00000504099 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
SLF1-206ENST00000504099 CYB5RLQ6IPT4 315 aa13.52□□□□□ -0.25
SLF1-206ENST00000504099 CLASP1Q7Z460 1538 aa13.52□□□□□ -0.25
SLF1-206ENST00000504099 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
SLF1-206ENST00000504099 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
SLF1-206ENST00000504099 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
SLF1-206ENST00000504099 SYNJ2O15056 1496 aa13.44□□□□□ -0.26
SLF1-206ENST00000504099 ABCA5Q8WWZ7 1642 aa13.44□□□□□ -0.26
SLF1-206ENST00000504099 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
SLF1-206ENST00000504099 CHMP7Q8WUX9 453 aaPredicted RBP13.41□□□□□ -0.26
SLF1-206ENST00000504099 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
SLF1-206ENST00000504099 ABCA10Q8WWZ4 1543 aa13.39□□□□□ -0.27
SLF1-206ENST00000504099 MS4A3Q96HJ5 214 aa13.39□□□□□ -0.27
SLF1-206ENST00000504099 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
SLF1-206ENST00000504099 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
SLF1-206ENST00000504099 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
SLF1-206ENST00000504099 RASEFQ8IZ41 740 aa13.35□□□□□ -0.27
SLF1-206ENST00000504099 ADAMTS12P58397 1594 aa13.34□□□□□ -0.27
SLF1-206ENST00000504099 TOP2BQ02880 1626 aa13.32□□□□□ -0.28
SLF1-206ENST00000504099 GRIN2AQ12879 1464 aa13.31□□□□□ -0.28
SLF1-206ENST00000504099 CEP170Q5SW79 1584 aa13.3□□□□□ -0.28
SLF1-206ENST00000504099 ERCC6L2Q5T890 1561 aa13.3□□□□□ -0.28
SLF1-206ENST00000504099 SUPT5HO00267 1087 aaKnown RBP13.3□□□□□ -0.28
SLF1-206ENST00000504099 KIF12Q96FN5 646 aa13.3□□□□□ -0.28
SLF1-206ENST00000504099 WRNQ14191 1432 aaPredicted RBP eCLIP13.29□□□□□ -0.28
SLF1-206ENST00000504099 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
SLF1-206ENST00000504099 NUP160Q12769 1436 aa13.25□□□□□ -0.29
SLF1-206ENST00000504099 MAP3K13O43283 966 aa13.25□□□□□ -0.29
SLF1-206ENST00000504099 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
SLF1-206ENST00000504099 ATMINO43313 823 aaPredicted RBP13.24□□□□□ -0.29
SLF1-206ENST00000504099 NUBP1P53384 320 aa13.24□□□□□ -0.29
SLF1-206ENST00000504099 ASTLQ6HA08 431 aaPredicted RBP13.24□□□□□ -0.29
SLF1-206ENST00000504099 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
SLF1-206ENST00000504099 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms