RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 POLA1P09884 1462 aaPredicted RBP18.83■□□□□ 0.6
CDK11A-222ENST00000498810 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
CDK11A-222ENST00000498810 CUX1P39880 1505 aa18.8■□□□□ 0.6
CDK11A-222ENST00000498810 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
CDK11A-222ENST00000498810 RAD54L2Q9Y4B4 1467 aa18.74■□□□□ 0.59
CDK11A-222ENST00000498810 SOGA1O94964 1423 aa18.74■□□□□ 0.59
CDK11A-222ENST00000498810 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
CDK11A-222ENST00000498810 CHD1O14646 1710 aa18.71■□□□□ 0.59
CDK11A-222ENST00000498810 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
CDK11A-222ENST00000498810 AQRO60306 1485 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDK11A-222ENST00000498810 OSCARQ8IYS5 282 aa18.67■□□□□ 0.58
CDK11A-222ENST00000498810 BIVM-ERCC5R4GMW8 1640 aa18.67■□□□□ 0.58
CDK11A-222ENST00000498810 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
CDK11A-222ENST00000498810 ZBTB12Q9Y330 459 aaPredicted RBP18.64■□□□□ 0.57
CDK11A-222ENST00000498810 TDRD9Q8NDG6 1382 aaKnown RBP18.64■□□□□ 0.57
CDK11A-222ENST00000498810 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.57
CDK11A-222ENST00000498810 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
CDK11A-222ENST00000498810 SYNJ1O43426 1573 aa18.63■□□□□ 0.57
CDK11A-222ENST00000498810 FBLN2P98095 1184 aa18.6■□□□□ 0.57
CDK11A-222ENST00000498810 SNAPC4Q5SXM2 1469 aa18.59■□□□□ 0.57
CDK11A-222ENST00000498810 RBM42Q9BTD8 480 aaKnown RBP18.57■□□□□ 0.56
CDK11A-222ENST00000498810 GRIN2BQ13224 1484 aa18.57■□□□□ 0.56
CDK11A-222ENST00000498810 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
CDK11A-222ENST00000498810 ABCA10Q8WWZ4 1543 aa18.56■□□□□ 0.56
CDK11A-222ENST00000498810 GAPVD1Q14C86 1478 aa18.56■□□□□ 0.56
CDK11A-222ENST00000498810 MAGI1Q96QZ7 1491 aaPredicted RBP18.55■□□□□ 0.56
CDK11A-222ENST00000498810 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
CDK11A-222ENST00000498810 RIMBP3CA6NJZ7 1639 aa18.5■□□□□ 0.55
CDK11A-222ENST00000498810 RIMBP3BA6NNM3 1639 aa18.5■□□□□ 0.55
CDK11A-222ENST00000498810 RIMBP3Q9UFD9 1639 aa18.5■□□□□ 0.55
CDK11A-222ENST00000498810 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
CDK11A-222ENST00000498810 SYNJ2O15056 1496 aa18.47■□□□□ 0.55
CDK11A-222ENST00000498810 ARHGEF11O15085 1522 aa18.44■□□□□ 0.54
CDK11A-222ENST00000498810 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
CDK11A-222ENST00000498810 ERICH3Q5RHP9 1530 aa18.38■□□□□ 0.53
CDK11A-222ENST00000498810 CLASP1Q7Z460 1538 aa18.37■□□□□ 0.53
CDK11A-222ENST00000498810 GRIN2AQ12879 1464 aa18.34■□□□□ 0.53
CDK11A-222ENST00000498810 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
CDK11A-222ENST00000498810 MKRN4PQ13434 485 aaPredicted RBP18.29■□□□□ 0.52
CDK11A-222ENST00000498810 KIF27Q86VH2 1401 aa18.27■□□□□ 0.52
CDK11A-222ENST00000498810 CUL7Q14999 1698 aa18.27■□□□□ 0.52
CDK11A-222ENST00000498810 CEP170Q5SW79 1584 aa18.26■□□□□ 0.51
CDK11A-222ENST00000498810 ARAP1Q96P48 1450 aa18.25■□□□□ 0.51
CDK11A-222ENST00000498810 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
CDK11A-222ENST00000498810 CYB5RLQ6IPT4 315 aa18.23■□□□□ 0.51
CDK11A-222ENST00000498810 NUP160Q12769 1436 aa18.2■□□□□ 0.5
CDK11A-222ENST00000498810 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
CDK11A-222ENST00000498810 SHROOM2Q13796 1616 aa18.14■□□□□ 0.49
CDK11A-222ENST00000498810 SPDYE2BA6NHP3 402 aa18.11■□□□□ 0.49
CDK11A-222ENST00000498810 SPDYE6P0CI01 402 aa18.11■□□□□ 0.49
CDK11A-222ENST00000498810 SPDYE2Q495Y8 402 aa18.11■□□□□ 0.49
CDK11A-222ENST00000498810 POTEHQ6S545 545 aa18.11■□□□□ 0.49
CDK11A-222ENST00000498810 ERCC6L2Q5T890 1561 aa18.09■□□□□ 0.49
CDK11A-222ENST00000498810 IGF1RP08069 1367 aa18.09■□□□□ 0.49
CDK11A-222ENST00000498810 REM2Q8IYK8 340 aaPredicted RBP18.07■□□□□ 0.48
CDK11A-222ENST00000498810 CARMIL1Q5VZK9 1371 aa18.05■□□□□ 0.48
CDK11A-222ENST00000498810 PRG4Q92954 1404 aaPredicted RBP18.05■□□□□ 0.48
CDK11A-222ENST00000498810 CHRDL2Q6WN34 429 aa18.03■□□□□ 0.48
CDK11A-222ENST00000498810 KIAA0586Q9BVV6 1533 aa18.01■□□□□ 0.47
CDK11A-222ENST00000498810 IQGAP2Q13576 1575 aa18■□□□□ 0.47
CDK11A-222ENST00000498810 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
CDK11A-222ENST00000498810 RAPGEF2Q9Y4G8 1499 aa17.98■□□□□ 0.47
CDK11A-222ENST00000498810 CTTNBP2Q8WZ74 1663 aa17.98■□□□□ 0.47
CDK11A-222ENST00000498810 SSUH2Q9Y2M2 353 aa17.94■□□□□ 0.46
CDK11A-222ENST00000498810 ZNF692Q9BU19 519 aaPredicted RBP17.93■□□□□ 0.46
CDK11A-222ENST00000498810 CARMIL2Q6F5E8 1435 aa17.9■□□□□ 0.46
CDK11A-222ENST00000498810 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
CDK11A-222ENST00000498810 PITPNM1O00562 1244 aa17.86■□□□□ 0.45
CDK11A-222ENST00000498810 ADCY10Q96PN6 1610 aa17.83■□□□□ 0.45
CDK11A-222ENST00000498810 NPM1P06748 294 aaKnown RBP eCLIP17.82■□□□□ 0.44
CDK11A-222ENST00000498810 EEA1Q15075 1411 aa17.81■□□□□ 0.44
CDK11A-222ENST00000498810 KIAA0556O60303 1618 aa17.81■□□□□ 0.44
CDK11A-222ENST00000498810 UGGT2Q9NYU1 1516 aa17.8■□□□□ 0.44
CDK11A-222ENST00000498810 PTPRGP23470 1445 aa17.8■□□□□ 0.44
CDK11A-222ENST00000498810 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
CDK11A-222ENST00000498810 PRXQ9BXM0 1461 aa17.79■□□□□ 0.44
CDK11A-222ENST00000498810 KIF13AQ9H1H9 1805 aa17.77■□□□□ 0.44
CDK11A-222ENST00000498810 DISP1Q96F81 1524 aa17.76■□□□□ 0.43
CDK11A-222ENST00000498810 GOLGA3Q08378 1498 aa17.75■□□□□ 0.43
CDK11A-222ENST00000498810 FAM9AQ8IZU1 332 aaPredicted RBP17.75■□□□□ 0.43
CDK11A-222ENST00000498810 MAPKBP1O60336 1514 aa17.72■□□□□ 0.43
CDK11A-222ENST00000498810 SPDYE1Q8NFV5 336 aaPredicted RBP17.7■□□□□ 0.42
CDK11A-222ENST00000498810 ABCC2Q92887 1545 aa17.69■□□□□ 0.42
CDK11A-222ENST00000498810 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
CDK11A-222ENST00000498810 KIF21BO75037 1637 aa17.69■□□□□ 0.42
CDK11A-222ENST00000498810 FXR2P51116 673 aaKnown RBP eCLIP17.68■□□□□ 0.42
CDK11A-222ENST00000498810 DIP2BQ9P265 1576 aa17.68■□□□□ 0.42
CDK11A-222ENST00000498810 UACAQ9BZF9 1416 aa17.67■□□□□ 0.42
CDK11A-222ENST00000498810 TSPOAP1O95153 1857 aa17.67■□□□□ 0.42
CDK11A-222ENST00000498810 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
CDK11A-222ENST00000498810 UHRF1BP1LA0JNW5 1464 aa17.64■□□□□ 0.41
CDK11A-222ENST00000498810 ABCC10Q5T3U5 1492 aa17.63■□□□□ 0.41
CDK11A-222ENST00000498810 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
CDK11A-222ENST00000498810 FAM69CQ0P6D2 419 aa17.61■□□□□ 0.41
CDK11A-222ENST00000498810 CLEC11AQ9Y240 323 aa17.6■□□□□ 0.41
CDK11A-222ENST00000498810 SAMD9Q5K651 1589 aa17.6■□□□□ 0.41
CDK11A-222ENST00000498810 PLB1Q6P1J6 1458 aa17.58■□□□□ 0.41
CDK11A-222ENST00000498810 ASXL2Q76L83 1435 aa17.57■□□□□ 0.4
CDK11A-222ENST00000498810 P3H3Q8IVL6 736 aa17.57■□□□□ 0.4
CDK11A-222ENST00000498810 KDM5BQ9UGL1 1544 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms