RNA–Protein interactions for RNA: ENST00000498189.1

BBS9-215, Transcript of Bardet-Biedl syndrome 9, humanhuman

TSL 2

Gene BBS9, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS9-215ENST00000498189 HAX1O00165 279 aa12.92□□□□□ -0.34
BBS9-215ENST00000498189 CADPSQ9ULU8 1353 aa12.88□□□□□ -0.35
BBS9-215ENST00000498189 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
BBS9-215ENST00000498189 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
BBS9-215ENST00000498189 NESP48681 1621 aa12.84□□□□□ -0.35
BBS9-215ENST00000498189 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
BBS9-215ENST00000498189 WIZO95785 1651 aa12.82□□□□□ -0.36
BBS9-215ENST00000498189 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
BBS9-215ENST00000498189 RSF1Q96T23 1441 aaPredicted RBP12.8□□□□□ -0.36
BBS9-215ENST00000498189 THOC2Q8NI27 1593 aaKnown RBP12.79□□□□□ -0.36
BBS9-215ENST00000498189 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
BBS9-215ENST00000498189 MRC2Q9UBG0 1479 aa12.76□□□□□ -0.37
BBS9-215ENST00000498189 EVX2Q03828 476 aa12.75□□□□□ -0.37
BBS9-215ENST00000498189 CFTRP13569 1480 aa12.74□□□□□ -0.37
BBS9-215ENST00000498189 CEP164Q9UPV0 1460 aa12.74□□□□□ -0.37
BBS9-215ENST00000498189 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
BBS9-215ENST00000498189 WDR62O43379 1518 aa12.71□□□□□ -0.38
BBS9-215ENST00000498189 C19orf67A6NJJ6 358 aa12.7□□□□□ -0.38
BBS9-215ENST00000498189 FANCD2Q9BXW9 1451 aa12.7□□□□□ -0.38
BBS9-215ENST00000498189 FARP1Q9Y4F1 1045 aaPredicted RBP12.69□□□□□ -0.38
BBS9-215ENST00000498189 PROM2Q8N271 834 aa12.66□□□□□ -0.38
BBS9-215ENST00000498189 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
BBS9-215ENST00000498189 PRDM2Q13029 1718 aa12.63□□□□□ -0.39
BBS9-215ENST00000498189 ABCC8Q09428 1581 aa12.63□□□□□ -0.39
BBS9-215ENST00000498189 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
BBS9-215ENST00000498189 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
BBS9-215ENST00000498189 FKBP8Q14318 412 aa12.53□□□□□ -0.4
BBS9-215ENST00000498189 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
BBS9-215ENST00000498189 URB2Q14146 1524 aaKnown RBP12.51□□□□□ -0.41
BBS9-215ENST00000498189 GABBR2O75899 941 aa12.48□□□□□ -0.41
BBS9-215ENST00000498189 DNMBPQ6XZF7 1577 aa12.45□□□□□ -0.42
BBS9-215ENST00000498189 MNX1P50219 401 aaPredicted RBP12.45□□□□□ -0.42
BBS9-215ENST00000498189 TOPBP1Q92547 1522 aa12.45□□□□□ -0.42
BBS9-215ENST00000498189 NPM1P06748 294 aaKnown RBP eCLIP12.44□□□□□ -0.42
BBS9-215ENST00000498189 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
BBS9-215ENST00000498189 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
BBS9-215ENST00000498189 MIER1Q8N108 512 aa12.39□□□□□ -0.43
BBS9-215ENST00000498189 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
BBS9-215ENST00000498189 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
BBS9-215ENST00000498189 CLCN6P51797 869 aa12.35□□□□□ -0.43
BBS9-215ENST00000498189 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
BBS9-215ENST00000498189 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
BBS9-215ENST00000498189 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
BBS9-215ENST00000498189 TARBP1Q13395 1621 aaKnown RBP12.3□□□□□ -0.44
BBS9-215ENST00000498189 SOGA1O94964 1423 aa12.3□□□□□ -0.44
BBS9-215ENST00000498189 PLCD3Q8N3E9 789 aa12.3□□□□□ -0.44
BBS9-215ENST00000498189 ZNF608Q9ULD9 1512 aaPredicted RBP12.3□□□□□ -0.44
BBS9-215ENST00000498189 SUPT5HO00267 1087 aaKnown RBP12.26□□□□□ -0.45
BBS9-215ENST00000498189 MAGI1Q96QZ7 1491 aaPredicted RBP12.25□□□□□ -0.45
BBS9-215ENST00000498189 FGD5Q6ZNL6 1462 aa12.24□□□□□ -0.45
BBS9-215ENST00000498189 TRIM41Q8WV44 630 aa12.24□□□□□ -0.45
BBS9-215ENST00000498189 PHF12Q96QT6 1004 aa12.24□□□□□ -0.45
BBS9-215ENST00000498189 AQRO60306 1485 aaKnown RBP eCLIP12.23□□□□□ -0.45
BBS9-215ENST00000498189 GRIN2BQ13224 1484 aa12.23□□□□□ -0.45
BBS9-215ENST00000498189 TSPYL2Q9H2G4 693 aaPredicted RBP12.23□□□□□ -0.45
BBS9-215ENST00000498189 FBXO3Q9UK99 471 aa12.23□□□□□ -0.45
BBS9-215ENST00000498189 CUX1P39880 1505 aa12.21□□□□□ -0.45
BBS9-215ENST00000498189 GALR2O43603 387 aaPredicted RBP12.2□□□□□ -0.46
BBS9-215ENST00000498189 POTEIP0CG38 1075 aa12.2□□□□□ -0.46
BBS9-215ENST00000498189 CHMP7Q8WUX9 453 aaPredicted RBP12.2□□□□□ -0.46
BBS9-215ENST00000498189 DCBLD2Q96PD2 775 aa12.2□□□□□ -0.46
BBS9-215ENST00000498189 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
BBS9-215ENST00000498189 RAD54L2Q9Y4B4 1467 aa12.19□□□□□ -0.46
BBS9-215ENST00000498189 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
BBS9-215ENST00000498189 ABCA10Q8WWZ4 1543 aa12.18□□□□□ -0.46
BBS9-215ENST00000498189 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
BBS9-215ENST00000498189 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
BBS9-215ENST00000498189 ARHGEF11O15085 1522 aa12.17□□□□□ -0.46
BBS9-215ENST00000498189 GAPVD1Q14C86 1478 aa12.17□□□□□ -0.46
BBS9-215ENST00000498189 CHD1O14646 1710 aa12.17□□□□□ -0.46
BBS9-215ENST00000498189 SYNJ2O15056 1496 aa12.16□□□□□ -0.46
BBS9-215ENST00000498189 RIMBP3CA6NJZ7 1639 aa12.16□□□□□ -0.46
BBS9-215ENST00000498189 RIMBP3BA6NNM3 1639 aa12.16□□□□□ -0.46
BBS9-215ENST00000498189 RIMBP3Q9UFD9 1639 aa12.16□□□□□ -0.46
BBS9-215ENST00000498189 SNAPC4Q5SXM2 1469 aa12.15□□□□□ -0.46
BBS9-215ENST00000498189 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
BBS9-215ENST00000498189 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
BBS9-215ENST00000498189 TOP2BQ02880 1626 aa12.13□□□□□ -0.47
BBS9-215ENST00000498189 BIVM-ERCC5R4GMW8 1640 aa12.12□□□□□ -0.47
BBS9-215ENST00000498189 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
BBS9-215ENST00000498189 ABCA5Q8WWZ7 1642 aa12.1□□□□□ -0.47
BBS9-215ENST00000498189 NUBP1P53384 320 aa12.08□□□□□ -0.48
BBS9-215ENST00000498189 MS4A3Q96HJ5 214 aa12.08□□□□□ -0.48
BBS9-215ENST00000498189 ERICH3Q5RHP9 1530 aa12.07□□□□□ -0.48
BBS9-215ENST00000498189 CLASP1Q7Z460 1538 aa12.07□□□□□ -0.48
BBS9-215ENST00000498189 CYB5RLQ6IPT4 315 aa12.06□□□□□ -0.48
BBS9-215ENST00000498189 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
BBS9-215ENST00000498189 FHAD1B1AJZ9 1412 aa12.05□□□□□ -0.48
BBS9-215ENST00000498189 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
BBS9-215ENST00000498189 LHX8Q68G74 356 aa12.05□□□□□ -0.48
BBS9-215ENST00000498189 GRIN2AQ12879 1464 aa12.02□□□□□ -0.48
BBS9-215ENST00000498189 ARAP1Q96P48 1450 aa12.02□□□□□ -0.49
BBS9-215ENST00000498189 ADAMTS12P58397 1594 aa12.01□□□□□ -0.49
BBS9-215ENST00000498189 MAP3K13O43283 966 aa12□□□□□ -0.49
BBS9-215ENST00000498189 FAM212AQ96EL1 285 aa12□□□□□ -0.49
BBS9-215ENST00000498189 KLHL34Q8N239 644 aa11.99□□□□□ -0.49
BBS9-215ENST00000498189 NUP160Q12769 1436 aa11.99□□□□□ -0.49
BBS9-215ENST00000498189 KIF27Q86VH2 1401 aa11.96□□□□□ -0.49
BBS9-215ENST00000498189 DCAF8Q5TAQ9 597 aa11.95□□□□□ -0.5
BBS9-215ENST00000498189 ASTLQ6HA08 431 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms