RNA–Protein interactions for RNA: ENST00000498189.1

BBS9-215, Transcript of Bardet-Biedl syndrome 9, humanhuman

TSL 2

Gene BBS9, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS9-215ENST00000498189 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
BBS9-215ENST00000498189 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
BBS9-215ENST00000498189 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
BBS9-215ENST00000498189 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
BBS9-215ENST00000498189 FOXD1Q16676 465 aa19.36■□□□□ 0.69
BBS9-215ENST00000498189 PLPPR3Q6T4P5 718 aa18.77■□□□□ 0.6
BBS9-215ENST00000498189 PPP6R1Q9UPN7 881 aa18.26■□□□□ 0.51
BBS9-215ENST00000498189 ADRA2BP18089 450 aa18.23■□□□□ 0.51
BBS9-215ENST00000498189 PIAS4Q8N2W9 510 aaPredicted RBP18.15■□□□□ 0.5
BBS9-215ENST00000498189 MSH5O43196 834 aa18.04■□□□□ 0.48
BBS9-215ENST00000498189 POTEDQ86YR6 584 aa17.28■□□□□ 0.36
BBS9-215ENST00000498189 NISCHQ9Y2I1 1504 aa16.97■□□□□ 0.31
BBS9-215ENST00000498189 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
BBS9-215ENST00000498189 MAPK8IP2Q13387 824 aaPredicted RBP16.68■□□□□ 0.26
BBS9-215ENST00000498189 DMRT2Q9Y5R5 561 aa16.52■□□□□ 0.24
BBS9-215ENST00000498189 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
BBS9-215ENST00000498189 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
BBS9-215ENST00000498189 HOXD11P31277 338 aaPredicted RBP15.98■□□□□ 0.15
BBS9-215ENST00000498189 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
BBS9-215ENST00000498189 RNF216Q9NWF9 866 aaPredicted RBP15.92■□□□□ 0.14
BBS9-215ENST00000498189 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
BBS9-215ENST00000498189 NPM3O75607 178 aaKnown RBP15.67■□□□□ 0.1
BBS9-215ENST00000498189 KCNA4P22459 653 aa15.55■□□□□ 0.08
BBS9-215ENST00000498189 RNF39Q9H2S5 420 aa15.41■□□□□ 0.06
BBS9-215ENST00000498189 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
BBS9-215ENST00000498189 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
BBS9-215ENST00000498189 CCDC180Q9P1Z9 1646 aa15.28■□□□□ 0.04
BBS9-215ENST00000498189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
BBS9-215ENST00000498189 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
BBS9-215ENST00000498189 ABCC9O60706 1549 aa14.98□□□□□ -0.01
BBS9-215ENST00000498189 U3KPZ7 1027 aaPredicted RBP14.93□□□□□ -0.02
BBS9-215ENST00000498189 SLC4A2P04920 1241 aa14.91□□□□□ -0.02
BBS9-215ENST00000498189 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
BBS9-215ENST00000498189 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
BBS9-215ENST00000498189 CAPN15O75808 1086 aa14.65□□□□□ -0.06
BBS9-215ENST00000498189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.6□□□□□ -0.07
BBS9-215ENST00000498189 HNRNPUL2Q1KMD3 747 aaKnown RBP14.6□□□□□ -0.07
BBS9-215ENST00000498189 APLP2Q06481 763 aa14.56□□□□□ -0.08
BBS9-215ENST00000498189 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.09
BBS9-215ENST00000498189 DSG3P32926 999 aa14.51□□□□□ -0.09
BBS9-215ENST00000498189 RB1CC1Q8TDY2 1594 aa14.5□□□□□ -0.09
BBS9-215ENST00000498189 MYCNP04198 464 aaPredicted RBP14.48□□□□□ -0.09
BBS9-215ENST00000498189 TRHP20396 242 aaPredicted RBP14.47□□□□□ -0.09
BBS9-215ENST00000498189 NACADO15069 1562 aa14.44□□□□□ -0.1
BBS9-215ENST00000498189 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
BBS9-215ENST00000498189 ZNF219Q9P2Y4 722 aaPredicted RBP14.43□□□□□ -0.1
BBS9-215ENST00000498189 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
BBS9-215ENST00000498189 ABCB7O75027 752 aa14.31□□□□□ -0.12
BBS9-215ENST00000498189 ZBTB22O15209 634 aa14.28□□□□□ -0.12
BBS9-215ENST00000498189 DCAF8L2P0C7V8 631 aa14.22□□□□□ -0.13
BBS9-215ENST00000498189 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
BBS9-215ENST00000498189 ATF5Q9Y2D1 282 aaPredicted RBP14.14□□□□□ -0.15
BBS9-215ENST00000498189 POLA2Q14181 598 aa14.13□□□□□ -0.15
BBS9-215ENST00000498189 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
BBS9-215ENST00000498189 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
BBS9-215ENST00000498189 ATXN8OSP0DMR3 200 aa13.98□□□□□ -0.17
BBS9-215ENST00000498189 UNC13AQ9UPW8 1703 aa13.97□□□□□ -0.17
BBS9-215ENST00000498189 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
BBS9-215ENST00000498189 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
BBS9-215ENST00000498189 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
BBS9-215ENST00000498189 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
BBS9-215ENST00000498189 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
BBS9-215ENST00000498189 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
BBS9-215ENST00000498189 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
BBS9-215ENST00000498189 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
BBS9-215ENST00000498189 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
BBS9-215ENST00000498189 CC2D2AQ9P2K1 1620 aa13.6□□□□□ -0.23
BBS9-215ENST00000498189 FBLN2P98095 1184 aa13.59□□□□□ -0.23
BBS9-215ENST00000498189 POTEHQ6S545 545 aa13.59□□□□□ -0.23
BBS9-215ENST00000498189 CECR2Q9BXF3 1484 aa13.57□□□□□ -0.24
BBS9-215ENST00000498189 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
BBS9-215ENST00000498189 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
BBS9-215ENST00000498189 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
BBS9-215ENST00000498189 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
BBS9-215ENST00000498189 SPDYE2BA6NHP3 402 aa13.43□□□□□ -0.26
BBS9-215ENST00000498189 SPDYE6P0CI01 402 aa13.43□□□□□ -0.26
BBS9-215ENST00000498189 SPDYE2Q495Y8 402 aa13.43□□□□□ -0.26
BBS9-215ENST00000498189 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
BBS9-215ENST00000498189 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
BBS9-215ENST00000498189 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
BBS9-215ENST00000498189 SMARCA2P51531 1590 aa13.28□□□□□ -0.28
BBS9-215ENST00000498189 SSUH2Q9Y2M2 353 aa13.25□□□□□ -0.29
BBS9-215ENST00000498189 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
BBS9-215ENST00000498189 HMGXB3Q12766 1538 aa13.22□□□□□ -0.29
BBS9-215ENST00000498189 SMARCA4P51532 1647 aa13.21□□□□□ -0.3
BBS9-215ENST00000498189 ATAD2BQ9ULI0 1458 aa13.2□□□□□ -0.3
BBS9-215ENST00000498189 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
BBS9-215ENST00000498189 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
BBS9-215ENST00000498189 PEG3Q9GZU2 1588 aa13.15□□□□□ -0.3
BBS9-215ENST00000498189 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
BBS9-215ENST00000498189 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
BBS9-215ENST00000498189 BAZ1BQ9UIG0 1483 aaKnown RBP13.11□□□□□ -0.31
BBS9-215ENST00000498189 CUX2O14529 1486 aa13.07□□□□□ -0.32
BBS9-215ENST00000498189 ERCC6Q03468 1493 aa13.07□□□□□ -0.32
BBS9-215ENST00000498189 LAMC3Q9Y6N6 1575 aa13□□□□□ -0.33
BBS9-215ENST00000498189 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
BBS9-215ENST00000498189 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
BBS9-215ENST00000498189 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
BBS9-215ENST00000498189 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.34
BBS9-215ENST00000498189 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms