RNA–Protein interactions for RNA: ENST00000497844.6

SPIRE1-210, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 5

Gene SPIRE1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-210ENST00000497844 TRIM41Q8WV44 630 aa9.26□□□□□ -0.93
SPIRE1-210ENST00000497844 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
SPIRE1-210ENST00000497844 STAG3Q9UJ98 1225 aa9.21□□□□□ -0.94
SPIRE1-210ENST00000497844 FBXO3Q9UK99 471 aa9.2□□□□□ -0.94
SPIRE1-210ENST00000497844 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
SPIRE1-210ENST00000497844 EEA1Q15075 1411 aa9.15□□□□□ -0.94
SPIRE1-210ENST00000497844 LAMC3Q9Y6N6 1575 aa9.15□□□□□ -0.95
SPIRE1-210ENST00000497844 PDS5BQ9NTI5 1447 aa9.14□□□□□ -0.95
SPIRE1-210ENST00000497844 PRR29P0C7W0 189 aa9.13□□□□□ -0.95
SPIRE1-210ENST00000497844 ABCC8Q09428 1581 aa9.12□□□□□ -0.95
SPIRE1-210ENST00000497844 VASPP50552 380 aaPredicted RBP9.12□□□□□ -0.95
SPIRE1-210ENST00000497844 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
SPIRE1-210ENST00000497844 FANCD2Q9BXW9 1451 aa9.08□□□□□ -0.96
SPIRE1-210ENST00000497844 TOP2BQ02880 1626 aa9.08□□□□□ -0.96
SPIRE1-210ENST00000497844 PIP4P2Q8N4L2 257 aa9.07□□□□□ -0.96
SPIRE1-210ENST00000497844 CREBZFQ9NS37 354 aa9.07□□□□□ -0.96
SPIRE1-210ENST00000497844 PRDM2Q13029 1718 aa9.07□□□□□ -0.96
SPIRE1-210ENST00000497844 MIER1Q8N108 512 aa9.04□□□□□ -0.96
SPIRE1-210ENST00000497844 BIVM-ERCC5R4GMW8 1640 aa9.04□□□□□ -0.96
SPIRE1-210ENST00000497844 CEP164Q9UPV0 1460 aa9.03□□□□□ -0.96
SPIRE1-210ENST00000497844 CHADLQ6NUI6 762 aa9.03□□□□□ -0.96
SPIRE1-210ENST00000497844 CUX1P39880 1505 aa9.02□□□□□ -0.97
SPIRE1-210ENST00000497844 IFNLR1Q8IU57 520 aaPredicted RBP9.02□□□□□ -0.97
SPIRE1-210ENST00000497844 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.97
SPIRE1-210ENST00000497844 SYNJ1O43426 1573 aa9.02□□□□□ -0.97
SPIRE1-210ENST00000497844 PRKAR2AP13861 404 aaKnown RBP9.01□□□□□ -0.97
SPIRE1-210ENST00000497844 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
SPIRE1-210ENST00000497844 NESP48681 1621 aa9□□□□□ -0.97
SPIRE1-210ENST00000497844 DNMBPQ6XZF7 1577 aa8.99□□□□□ -0.97
SPIRE1-210ENST00000497844 KIF27Q86VH2 1401 aa8.99□□□□□ -0.97
SPIRE1-210ENST00000497844 SOGA1O94964 1423 aa8.97□□□□□ -0.97
SPIRE1-210ENST00000497844 TOPBP1Q92547 1522 aa8.97□□□□□ -0.97
SPIRE1-210ENST00000497844 MRC2Q9UBG0 1479 aa8.95□□□□□ -0.98
SPIRE1-210ENST00000497844 ABCA10Q8WWZ4 1543 aa8.95□□□□□ -0.98
SPIRE1-210ENST00000497844 PLEKHG5O94827 1062 aa8.94□□□□□ -0.98
SPIRE1-210ENST00000497844 TNIKQ9UKE5 1360 aa8.94□□□□□ -0.98
SPIRE1-210ENST00000497844 FGD5Q6ZNL6 1462 aa8.94□□□□□ -0.98
SPIRE1-210ENST00000497844 LOC105371045A0A1W2PR82 267 aa8.93□□□□□ -0.98
SPIRE1-210ENST00000497844 FARP1Q9Y4F1 1045 aaPredicted RBP8.93□□□□□ -0.98
SPIRE1-210ENST00000497844 POLA1P09884 1462 aaPredicted RBP8.93□□□□□ -0.98
SPIRE1-210ENST00000497844 URB2Q14146 1524 aaKnown RBP8.93□□□□□ -0.98
SPIRE1-210ENST00000497844 IGF1RP08069 1367 aa8.92□□□□□ -0.98
SPIRE1-210ENST00000497844 FAM9AQ8IZU1 332 aaPredicted RBP8.92□□□□□ -0.98
SPIRE1-210ENST00000497844 PRXQ9BXM0 1461 aa8.91□□□□□ -0.98
SPIRE1-210ENST00000497844 HAX1O00165 279 aa8.91□□□□□ -0.98
SPIRE1-210ENST00000497844 KLHL34Q8N239 644 aa8.91□□□□□ -0.98
SPIRE1-210ENST00000497844 SP7Q8TDD2 431 aaPredicted RBP8.91□□□□□ -0.98
SPIRE1-210ENST00000497844 ZBTB47Q9UFB7 747 aaPredicted RBP8.91□□□□□ -0.98
SPIRE1-210ENST00000497844 WDR62O43379 1518 aa8.9□□□□□ -0.99
SPIRE1-210ENST00000497844 GOLGA3Q08378 1498 aa8.89□□□□□ -0.99
SPIRE1-210ENST00000497844 WDR97A6NE52 1622 aa8.89□□□□□ -0.99
SPIRE1-210ENST00000497844 KIF21BO75037 1637 aa8.89□□□□□ -0.99
SPIRE1-210ENST00000497844 ERICH3Q5RHP9 1530 aa8.89□□□□□ -0.99
SPIRE1-210ENST00000497844 RUSC2Q8N2Y8 1516 aa8.89□□□□□ -0.99
SPIRE1-210ENST00000497844 CUX2O14529 1486 aa8.89□□□□□ -0.99
SPIRE1-210ENST00000497844 ERCC6Q03468 1493 aa8.89□□□□□ -0.99
SPIRE1-210ENST00000497844 IFT140Q96RY7 1462 aa8.89□□□□□ -0.99
SPIRE1-210ENST00000497844 NUBP1P53384 320 aa8.87□□□□□ -0.99
SPIRE1-210ENST00000497844 SPOCK2Q92563 424 aa8.87□□□□□ -0.99
SPIRE1-210ENST00000497844 CARMIL1Q5VZK9 1371 aa8.86□□□□□ -0.99
SPIRE1-210ENST00000497844 NPM1P06748 294 aaKnown RBP eCLIP8.85□□□□□ -0.99
SPIRE1-210ENST00000497844 UBTFP17480 764 aaKnown RBP8.85□□□□□ -0.99
SPIRE1-210ENST00000497844 RAD54L2Q9Y4B4 1467 aa8.84□□□□□ -0.99
SPIRE1-210ENST00000497844 KIF21AQ7Z4S6 1674 aa8.84□□□□□ -0.99
SPIRE1-210ENST00000497844 GAPVD1Q14C86 1478 aa8.83□□□□□ -1
SPIRE1-210ENST00000497844 RAPGEF2Q9Y4G8 1499 aa8.83□□□□□ -1
SPIRE1-210ENST00000497844 RASEFQ8IZ41 740 aa8.83□□□□□ -1
SPIRE1-210ENST00000497844 TARBP1Q13395 1621 aaKnown RBP8.81□□□□□ -1
SPIRE1-210ENST00000497844 THOC2Q8NI27 1593 aaKnown RBP8.79□□□□□ -1
SPIRE1-210ENST00000497844 GRIN2BQ13224 1484 aa8.79□□□□□ -1
SPIRE1-210ENST00000497844 TDRD9Q8NDG6 1382 aaKnown RBP8.79□□□□□ -1
SPIRE1-210ENST00000497844 ABCA5Q8WWZ7 1642 aa8.79□□□□□ -1
SPIRE1-210ENST00000497844 FHAD1B1AJZ9 1412 aa8.79□□□□□ -1
SPIRE1-210ENST00000497844 CUL7Q14999 1698 aa8.78□□□□□ -1
SPIRE1-210ENST00000497844 C19orf67A6NJJ6 358 aa8.78□□□□□ -1
SPIRE1-210ENST00000497844 CEP162Q5TB80 1403 aa8.78□□□□□ -1
SPIRE1-210ENST00000497844 EVX2Q03828 476 aa8.77□□□□□ -1.01
SPIRE1-210ENST00000497844 CD44P16070 742 aaKnown RBP8.75□□□□□ -1.01
SPIRE1-210ENST00000497844 RTN4Q9NQC3 1192 aaKnown RBP8.75□□□□□ -1.01
SPIRE1-210ENST00000497844 CLIP1P30622 1438 aa8.74□□□□□ -1.01
SPIRE1-210ENST00000497844 AMER1Q5JTC6 1135 aaPredicted RBP8.74□□□□□ -1.01
SPIRE1-210ENST00000497844 FAM212AQ96EL1 285 aa8.74□□□□□ -1.01
SPIRE1-210ENST00000497844 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
SPIRE1-210ENST00000497844 AQRO60306 1485 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPIRE1-210ENST00000497844 MAGI1Q96QZ7 1491 aaPredicted RBP8.74□□□□□ -1.01
SPIRE1-210ENST00000497844 PKD2Q13563 968 aa8.73□□□□□ -1.01
SPIRE1-210ENST00000497844 DCAF8Q5TAQ9 597 aa8.73□□□□□ -1.01
SPIRE1-210ENST00000497844 CIZ1Q9ULV3 898 aaPredicted RBP8.72□□□□□ -1.01
SPIRE1-210ENST00000497844 GSE1Q14687 1217 aa8.71□□□□□ -1.02
SPIRE1-210ENST00000497844 CCDC61Q9Y6R9 512 aa8.71□□□□□ -1.02
SPIRE1-210ENST00000497844 ZRANB1Q9UGI0 708 aa8.7□□□□□ -1.02
SPIRE1-210ENST00000497844 ZNF608Q9ULD9 1512 aaPredicted RBP8.7□□□□□ -1.02
SPIRE1-210ENST00000497844 VPS8Q8N3P4 1428 aa8.69□□□□□ -1.02
SPIRE1-210ENST00000497844 PAK3O75914 559 aaPredicted RBP8.68□□□□□ -1.02
SPIRE1-210ENST00000497844 CHMP7Q8WUX9 453 aaPredicted RBP8.68□□□□□ -1.02
SPIRE1-210ENST00000497844 SYNJ2O15056 1496 aa8.68□□□□□ -1.02
SPIRE1-210ENST00000497844 EFCAB5A4FU69 1503 aa8.67□□□□□ -1.02
SPIRE1-210ENST00000497844 HRCP23327 699 aa8.67□□□□□ -1.02
SPIRE1-210ENST00000497844 KIAA0586Q9BVV6 1533 aa8.67□□□□□ -1.02
SPIRE1-210ENST00000497844 ADAMTS12P58397 1594 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms