RNA–Protein interactions for RNA: ENST00000497844.6

SPIRE1-210, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 5

Gene SPIRE1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-210ENST00000497844 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
SPIRE1-210ENST00000497844 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
SPIRE1-210ENST00000497844 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
SPIRE1-210ENST00000497844 SENP3Q9H4L4 574 aaPredicted RBP14.37□□□□□ -0.11
SPIRE1-210ENST00000497844 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
SPIRE1-210ENST00000497844 FOXD1Q16676 465 aa13.38□□□□□ -0.27
SPIRE1-210ENST00000497844 PPP6R1Q9UPN7 881 aa12.9□□□□□ -0.34
SPIRE1-210ENST00000497844 ADRA2BP18089 450 aa12.87□□□□□ -0.35
SPIRE1-210ENST00000497844 NISCHQ9Y2I1 1504 aa12.59□□□□□ -0.39
SPIRE1-210ENST00000497844 PIAS4Q8N2W9 510 aaPredicted RBP12.59□□□□□ -0.39
SPIRE1-210ENST00000497844 MSH5O43196 834 aa12.45□□□□□ -0.42
SPIRE1-210ENST00000497844 POTEDQ86YR6 584 aa12.08□□□□□ -0.48
SPIRE1-210ENST00000497844 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
SPIRE1-210ENST00000497844 SCAF1Q9H7N4 1312 aaKnown RBP11.69□□□□□ -0.54
SPIRE1-210ENST00000497844 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
SPIRE1-210ENST00000497844 KCNA4P22459 653 aa11.63□□□□□ -0.55
SPIRE1-210ENST00000497844 CNKSR2Q8WXI2 1034 aa11.52□□□□□ -0.57
SPIRE1-210ENST00000497844 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
SPIRE1-210ENST00000497844 DMRT2Q9Y5R5 561 aa11.5□□□□□ -0.57
SPIRE1-210ENST00000497844 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.58
SPIRE1-210ENST00000497844 RNF216Q9NWF9 866 aaPredicted RBP11.3□□□□□ -0.6
SPIRE1-210ENST00000497844 HOXD11P31277 338 aaPredicted RBP11.28□□□□□ -0.6
SPIRE1-210ENST00000497844 DNAJC5BQ9UF47 199 aa11.08□□□□□ -0.64
SPIRE1-210ENST00000497844 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
SPIRE1-210ENST00000497844 CCDC180Q9P1Z9 1646 aa10.97□□□□□ -0.65
SPIRE1-210ENST00000497844 DCAF8L1A6NGE4 600 aa10.94□□□□□ -0.66
SPIRE1-210ENST00000497844 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
SPIRE1-210ENST00000497844 ZBTB22O15209 634 aa10.74□□□□□ -0.69
SPIRE1-210ENST00000497844 EHMT2Q96KQ7 1210 aa10.73□□□□□ -0.69
SPIRE1-210ENST00000497844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.7
SPIRE1-210ENST00000497844 CACNB1Q02641 598 aaPredicted RBP10.68□□□□□ -0.7
SPIRE1-210ENST00000497844 FOXD4L1Q9NU39 408 aa10.68□□□□□ -0.7
SPIRE1-210ENST00000497844 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
SPIRE1-210ENST00000497844 RNF39Q9H2S5 420 aa10.62□□□□□ -0.71
SPIRE1-210ENST00000497844 U3KPZ7 1027 aaPredicted RBP10.58□□□□□ -0.72
SPIRE1-210ENST00000497844 ZCCHC6Q5VYS8 1495 aaKnown RBP10.56□□□□□ -0.72
SPIRE1-210ENST00000497844 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
SPIRE1-210ENST00000497844 MYCNP04198 464 aaPredicted RBP10.51□□□□□ -0.73
SPIRE1-210ENST00000497844 MYO15BQ96JP2 1530 aa10.48□□□□□ -0.73
SPIRE1-210ENST00000497844 C1QBPQ07021 282 aaKnown RBP10.46□□□□□ -0.73
SPIRE1-210ENST00000497844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.36□□□□□ -0.75
SPIRE1-210ENST00000497844 HNRNPUL2Q1KMD3 747 aaKnown RBP10.36□□□□□ -0.75
SPIRE1-210ENST00000497844 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
SPIRE1-210ENST00000497844 NACADO15069 1562 aa10.31□□□□□ -0.76
SPIRE1-210ENST00000497844 DCAF8L2P0C7V8 631 aa10.3□□□□□ -0.76
SPIRE1-210ENST00000497844 ABCC9O60706 1549 aa10.29□□□□□ -0.76
SPIRE1-210ENST00000497844 ATF5Q9Y2D1 282 aaPredicted RBP10.29□□□□□ -0.76
SPIRE1-210ENST00000497844 ATXN8OSP0DMR3 200 aa10.28□□□□□ -0.76
SPIRE1-210ENST00000497844 SPINK5Q9NQ38 1064 aaPredicted RBP10.28□□□□□ -0.76
SPIRE1-210ENST00000497844 APLP2Q06481 763 aa10.23□□□□□ -0.77
SPIRE1-210ENST00000497844 CAPN15O75808 1086 aa10.18□□□□□ -0.78
SPIRE1-210ENST00000497844 RB1CC1Q8TDY2 1594 aa10.17□□□□□ -0.78
SPIRE1-210ENST00000497844 TRHP20396 242 aaPredicted RBP10.14□□□□□ -0.79
SPIRE1-210ENST00000497844 ZNF219Q9P2Y4 722 aaPredicted RBP10.14□□□□□ -0.79
SPIRE1-210ENST00000497844 DSG3P32926 999 aa10.06□□□□□ -0.8
SPIRE1-210ENST00000497844 SHROOM4Q9ULL8 1493 aa10.03□□□□□ -0.8
SPIRE1-210ENST00000497844 ABCB7O75027 752 aa10.02□□□□□ -0.81
SPIRE1-210ENST00000497844 POLA2Q14181 598 aa10□□□□□ -0.81
SPIRE1-210ENST00000497844 SCRIBQ14160 1630 aa9.93□□□□□ -0.82
SPIRE1-210ENST00000497844 MKRN4PQ13434 485 aaPredicted RBP9.84□□□□□ -0.83
SPIRE1-210ENST00000497844 ZBTB12Q9Y330 459 aaPredicted RBP9.79□□□□□ -0.84
SPIRE1-210ENST00000497844 BICRAQ9NZM4 1560 aa9.78□□□□□ -0.84
SPIRE1-210ENST00000497844 FBLN2P98095 1184 aa9.75□□□□□ -0.85
SPIRE1-210ENST00000497844 RSF1Q96T23 1441 aaPredicted RBP9.74□□□□□ -0.85
SPIRE1-210ENST00000497844 UNC13AQ9UPW8 1703 aa9.74□□□□□ -0.85
SPIRE1-210ENST00000497844 BAZ1AQ9NRL2 1556 aaPredicted RBP9.73□□□□□ -0.85
SPIRE1-210ENST00000497844 SUPT5HO00267 1087 aaKnown RBP9.73□□□□□ -0.85
SPIRE1-210ENST00000497844 PABPN1Q86U42 306 aaKnown RBP eCLIP9.72□□□□□ -0.85
SPIRE1-210ENST00000497844 CECR2Q9BXF3 1484 aa9.69□□□□□ -0.86
SPIRE1-210ENST00000497844 OSCARQ8IYS5 282 aa9.68□□□□□ -0.86
SPIRE1-210ENST00000497844 MROH2BQ7Z745 1585 aa9.64□□□□□ -0.87
SPIRE1-210ENST00000497844 PEG3Q9GZU2 1588 aa9.62□□□□□ -0.87
SPIRE1-210ENST00000497844 SMARCA4P51532 1647 aa9.61□□□□□ -0.87
SPIRE1-210ENST00000497844 FKBP8Q14318 412 aa9.59□□□□□ -0.87
SPIRE1-210ENST00000497844 SMARCA2P51531 1590 aa9.56□□□□□ -0.88
SPIRE1-210ENST00000497844 SPDYE2BA6NHP3 402 aa9.56□□□□□ -0.88
SPIRE1-210ENST00000497844 SPDYE4A6NLX3 237 aa9.56□□□□□ -0.88
SPIRE1-210ENST00000497844 SPDYE6P0CI01 402 aa9.56□□□□□ -0.88
SPIRE1-210ENST00000497844 SPDYE2Q495Y8 402 aa9.56□□□□□ -0.88
SPIRE1-210ENST00000497844 NCAPD3P42695 1498 aa9.54□□□□□ -0.88
SPIRE1-210ENST00000497844 ATAD2BQ9ULI0 1458 aa9.54□□□□□ -0.88
SPIRE1-210ENST00000497844 RBM42Q9BTD8 480 aaKnown RBP9.53□□□□□ -0.88
SPIRE1-210ENST00000497844 SSUH2Q9Y2M2 353 aa9.53□□□□□ -0.88
SPIRE1-210ENST00000497844 TOP2AP11388 1531 aaKnown RBP9.51□□□□□ -0.89
SPIRE1-210ENST00000497844 EIF4G1Q04637 1599 aaKnown RBP9.51□□□□□ -0.89
SPIRE1-210ENST00000497844 ZNF692Q9BU19 519 aaPredicted RBP9.51□□□□□ -0.89
SPIRE1-210ENST00000497844 WIZO95785 1651 aa9.48□□□□□ -0.89
SPIRE1-210ENST00000497844 POTEHQ6S545 545 aa9.48□□□□□ -0.89
SPIRE1-210ENST00000497844 HMGXB3Q12766 1538 aa9.46□□□□□ -0.89
SPIRE1-210ENST00000497844 PROM2Q8N271 834 aa9.46□□□□□ -0.9
SPIRE1-210ENST00000497844 BAZ1BQ9UIG0 1483 aaKnown RBP9.45□□□□□ -0.9
SPIRE1-210ENST00000497844 AKT1S1Q96B36 256 aa9.44□□□□□ -0.9
SPIRE1-210ENST00000497844 CCDC88BA6NC98 1476 aa9.41□□□□□ -0.9
SPIRE1-210ENST00000497844 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
SPIRE1-210ENST00000497844 CC2D2AQ9P2K1 1620 aa9.34□□□□□ -0.91
SPIRE1-210ENST00000497844 CHRDL2Q6WN34 429 aa9.29□□□□□ -0.92
SPIRE1-210ENST00000497844 CFTRP13569 1480 aa9.28□□□□□ -0.92
SPIRE1-210ENST00000497844 CADPSQ9ULU8 1353 aa9.27□□□□□ -0.93
SPIRE1-210ENST00000497844 PITPNM1O00562 1244 aa9.27□□□□□ -0.93
SPIRE1-210ENST00000497844 SPDYE1Q8NFV5 336 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms