RNA–Protein interactions for RNA: ENST00000497465.1

ELL3-206, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 964 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-206ENST00000497465 PROM2Q8N271 834 aa9.72□□□□□ -0.85
ELL3-206ENST00000497465 CEP164Q9UPV0 1460 aa9.71□□□□□ -0.86
ELL3-206ENST00000497465 RTN4Q9NQC3 1192 aaKnown RBP9.7□□□□□ -0.86
ELL3-206ENST00000497465 ARHGEF11O15085 1522 aa9.7□□□□□ -0.86
ELL3-206ENST00000497465 FANCD2Q9BXW9 1451 aa9.67□□□□□ -0.86
ELL3-206ENST00000497465 TOP2AP11388 1531 aaKnown RBP9.65□□□□□ -0.86
ELL3-206ENST00000497465 RSF1Q96T23 1441 aaPredicted RBP9.64□□□□□ -0.87
ELL3-206ENST00000497465 SPDYE2BA6NHP3 402 aa9.63□□□□□ -0.87
ELL3-206ENST00000497465 SPDYE6P0CI01 402 aa9.63□□□□□ -0.87
ELL3-206ENST00000497465 SPDYE2Q495Y8 402 aa9.63□□□□□ -0.87
ELL3-206ENST00000497465 ZNF692Q9BU19 519 aaPredicted RBP9.63□□□□□ -0.87
ELL3-206ENST00000497465 URB2Q14146 1524 aaKnown RBP9.62□□□□□ -0.87
ELL3-206ENST00000497465 PRDM2Q13029 1718 aa9.6□□□□□ -0.87
ELL3-206ENST00000497465 ZNF608Q9ULD9 1512 aaPredicted RBP9.6□□□□□ -0.87
ELL3-206ENST00000497465 ARAP1Q96P48 1450 aa9.59□□□□□ -0.87
ELL3-206ENST00000497465 VASPP50552 380 aaPredicted RBP9.58□□□□□ -0.88
ELL3-206ENST00000497465 SSUH2Q9Y2M2 353 aa9.57□□□□□ -0.88
ELL3-206ENST00000497465 CFTRP13569 1480 aa9.57□□□□□ -0.88
ELL3-206ENST00000497465 CHD1O14646 1710 aa9.53□□□□□ -0.88
ELL3-206ENST00000497465 IFT140Q96RY7 1462 aa9.52□□□□□ -0.89
ELL3-206ENST00000497465 AQRO60306 1485 aaKnown RBP eCLIP9.49□□□□□ -0.89
ELL3-206ENST00000497465 ILDR1Q86SU0 546 aaPredicted RBP9.47□□□□□ -0.89
ELL3-206ENST00000497465 CCDC88BA6NC98 1476 aa9.47□□□□□ -0.89
ELL3-206ENST00000497465 EIF4G3O43432 1585 aaKnown RBP9.46□□□□□ -0.89
ELL3-206ENST00000497465 STAG3Q9UJ98 1225 aa9.45□□□□□ -0.9
ELL3-206ENST00000497465 TOPBP1Q92547 1522 aa9.45□□□□□ -0.9
ELL3-206ENST00000497465 IFNLR1Q8IU57 520 aaPredicted RBP9.43□□□□□ -0.9
ELL3-206ENST00000497465 RBM42Q9BTD8 480 aaKnown RBP9.43□□□□□ -0.9
ELL3-206ENST00000497465 CHMP7Q8WUX9 453 aaPredicted RBP9.4□□□□□ -0.9
ELL3-206ENST00000497465 DNMBPQ6XZF7 1577 aa9.39□□□□□ -0.91
ELL3-206ENST00000497465 TDRD9Q8NDG6 1382 aaKnown RBP9.38□□□□□ -0.91
ELL3-206ENST00000497465 PLCD3Q8N3E9 789 aa9.38□□□□□ -0.91
ELL3-206ENST00000497465 TARBP1Q13395 1621 aaKnown RBP9.36□□□□□ -0.91
ELL3-206ENST00000497465 KLHL34Q8N239 644 aa9.36□□□□□ -0.91
ELL3-206ENST00000497465 RAD54L2Q9Y4B4 1467 aa9.35□□□□□ -0.91
ELL3-206ENST00000497465 ABCC8Q09428 1581 aa9.35□□□□□ -0.91
ELL3-206ENST00000497465 CLASP1Q7Z460 1538 aa9.34□□□□□ -0.91
ELL3-206ENST00000497465 GAPVD1Q14C86 1478 aa9.34□□□□□ -0.91
ELL3-206ENST00000497465 SNAPC4Q5SXM2 1469 aa9.34□□□□□ -0.91
ELL3-206ENST00000497465 PLEKHG5O94827 1062 aa9.33□□□□□ -0.92
ELL3-206ENST00000497465 MIER1Q8N108 512 aa9.33□□□□□ -0.92
ELL3-206ENST00000497465 AKT1S1Q96B36 256 aa9.33□□□□□ -0.92
ELL3-206ENST00000497465 SYNJ1O43426 1573 aa9.33□□□□□ -0.92
ELL3-206ENST00000497465 SOGA1O94964 1423 aa9.31□□□□□ -0.92
ELL3-206ENST00000497465 SPOCK2Q92563 424 aa9.31□□□□□ -0.92
ELL3-206ENST00000497465 POLA1P09884 1462 aaPredicted RBP9.31□□□□□ -0.92
ELL3-206ENST00000497465 KDM4FA0A1W2PPD8 638 aa9.29□□□□□ -0.92
ELL3-206ENST00000497465 SPDYE1Q8NFV5 336 aaPredicted RBP9.29□□□□□ -0.92
ELL3-206ENST00000497465 ZBTB47Q9UFB7 747 aaPredicted RBP9.29□□□□□ -0.92
ELL3-206ENST00000497465 WDR97A6NE52 1622 aa9.27□□□□□ -0.92
ELL3-206ENST00000497465 CUX1P39880 1505 aa9.26□□□□□ -0.93
ELL3-206ENST00000497465 ERCC6L2Q5T890 1561 aa9.25□□□□□ -0.93
ELL3-206ENST00000497465 FGD5Q6ZNL6 1462 aa9.25□□□□□ -0.93
ELL3-206ENST00000497465 KIF13AQ9H1H9 1805 aa9.24□□□□□ -0.93
ELL3-206ENST00000497465 SYNJ2O15056 1496 aa9.23□□□□□ -0.93
ELL3-206ENST00000497465 GRIN2BQ13224 1484 aa9.23□□□□□ -0.93
ELL3-206ENST00000497465 MAGI1Q96QZ7 1491 aaPredicted RBP9.23□□□□□ -0.93
ELL3-206ENST00000497465 FAM69CQ0P6D2 419 aa9.23□□□□□ -0.93
ELL3-206ENST00000497465 CLEC11AQ9Y240 323 aa9.23□□□□□ -0.93
ELL3-206ENST00000497465 REM2Q8IYK8 340 aaPredicted RBP9.22□□□□□ -0.93
ELL3-206ENST00000497465 PKD2Q13563 968 aa9.21□□□□□ -0.94
ELL3-206ENST00000497465 PBRM1Q86U86 1689 aa9.2□□□□□ -0.94
ELL3-206ENST00000497465 ABCA5Q8WWZ7 1642 aa9.19□□□□□ -0.94
ELL3-206ENST00000497465 PRR29P0C7W0 189 aa9.18□□□□□ -0.94
ELL3-206ENST00000497465 BIVM-ERCC5R4GMW8 1640 aa9.17□□□□□ -0.94
ELL3-206ENST00000497465 TSPOAP1O95153 1857 aa9.17□□□□□ -0.94
ELL3-206ENST00000497465 ECM2O94769 699 aaPredicted RBP9.16□□□□□ -0.94
ELL3-206ENST00000497465 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
ELL3-206ENST00000497465 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
ELL3-206ENST00000497465 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.94
ELL3-206ENST00000497465 TOP2BQ02880 1626 aa9.15□□□□□ -0.94
ELL3-206ENST00000497465 SUPT5HO00267 1087 aaKnown RBP9.13□□□□□ -0.95
ELL3-206ENST00000497465 PITPNM1O00562 1244 aa9.13□□□□□ -0.95
ELL3-206ENST00000497465 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
ELL3-206ENST00000497465 KDM6BO15054 1643 aa9.13□□□□□ -0.95
ELL3-206ENST00000497465 ADAMTS12P58397 1594 aa9.12□□□□□ -0.95
ELL3-206ENST00000497465 ABCC10Q5T3U5 1492 aa9.11□□□□□ -0.95
ELL3-206ENST00000497465 GRIN2AQ12879 1464 aa9.1□□□□□ -0.95
ELL3-206ENST00000497465 WRNQ14191 1432 aaPredicted RBP eCLIP9.1□□□□□ -0.95
ELL3-206ENST00000497465 PRG4Q92954 1404 aaPredicted RBP9.09□□□□□ -0.95
ELL3-206ENST00000497465 JPH4Q96JJ6 628 aa9.09□□□□□ -0.95
ELL3-206ENST00000497465 CREBZFQ9NS37 354 aa9.09□□□□□ -0.95
ELL3-206ENST00000497465 NUP160Q12769 1436 aa9.07□□□□□ -0.96
ELL3-206ENST00000497465 GSE1Q14687 1217 aa9.06□□□□□ -0.96
ELL3-206ENST00000497465 ADGRL1O94910 1474 aa9.06□□□□□ -0.96
ELL3-206ENST00000497465 DIP2BQ9P265 1576 aa9.06□□□□□ -0.96
ELL3-206ENST00000497465 HECW2Q9P2P5 1572 aa9.06□□□□□ -0.96
ELL3-206ENST00000497465 TTBK1Q5TCY1 1321 aaPredicted RBP9.05□□□□□ -0.96
ELL3-206ENST00000497465 SHROOM2Q13796 1616 aa9.05□□□□□ -0.96
ELL3-206ENST00000497465 FBXO41Q8TF61 875 aa9.05□□□□□ -0.96
ELL3-206ENST00000497465 ERICH3Q5RHP9 1530 aa9.05□□□□□ -0.96
ELL3-206ENST00000497465 NUBP1P53384 320 aa9.03□□□□□ -0.96
ELL3-206ENST00000497465 FAM212AQ96EL1 285 aa9.03□□□□□ -0.96
ELL3-206ENST00000497465 RGL2O15211 777 aa9.02□□□□□ -0.97
ELL3-206ENST00000497465 MNX1P50219 401 aaPredicted RBP9.02□□□□□ -0.97
ELL3-206ENST00000497465 FHAD1B1AJZ9 1412 aa9.01□□□□□ -0.97
ELL3-206ENST00000497465 MAPKBP1O60336 1514 aa9□□□□□ -0.97
ELL3-206ENST00000497465 PLCB2Q00722 1185 aa9□□□□□ -0.97
ELL3-206ENST00000497465 RUSC2Q8N2Y8 1516 aa9□□□□□ -0.97
ELL3-206ENST00000497465 ADCY10Q96PN6 1610 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms