RNA–Protein interactions for RNA: ENST00000497465.1

ELL3-206, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 964 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-206ENST00000497465 AEBP2Q6ZN18 517 aaPredicted RBP16.59■□□□□ 0.25
ELL3-206ENST00000497465 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
ELL3-206ENST00000497465 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
ELL3-206ENST00000497465 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
ELL3-206ENST00000497465 PLPPR3Q6T4P5 718 aa13.58□□□□□ -0.24
ELL3-206ENST00000497465 FOXD1Q16676 465 aa13.01□□□□□ -0.33
ELL3-206ENST00000497465 NISCHQ9Y2I1 1504 aa12.78□□□□□ -0.36
ELL3-206ENST00000497465 ADRA2BP18089 450 aa12.73□□□□□ -0.37
ELL3-206ENST00000497465 PPP6R1Q9UPN7 881 aa12.7□□□□□ -0.38
ELL3-206ENST00000497465 PIAS4Q8N2W9 510 aaPredicted RBP12.4□□□□□ -0.42
ELL3-206ENST00000497465 KCNA4P22459 653 aa12□□□□□ -0.49
ELL3-206ENST00000497465 MSH5O43196 834 aa11.96□□□□□ -0.49
ELL3-206ENST00000497465 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.49
ELL3-206ENST00000497465 ABCC9O60706 1549 aa11.95□□□□□ -0.5
ELL3-206ENST00000497465 NCBP3Q53F19 620 aaKnown RBP11.78□□□□□ -0.52
ELL3-206ENST00000497465 SCAF1Q9H7N4 1312 aaKnown RBP11.72□□□□□ -0.53
ELL3-206ENST00000497465 DNAJC5BQ9UF47 199 aa11.63□□□□□ -0.55
ELL3-206ENST00000497465 CNKSR2Q8WXI2 1034 aa11.58□□□□□ -0.56
ELL3-206ENST00000497465 NPM3O75607 178 aaKnown RBP11.56□□□□□ -0.56
ELL3-206ENST00000497465 CCDC180Q9P1Z9 1646 aa11.53□□□□□ -0.56
ELL3-206ENST00000497465 EHMT2Q96KQ7 1210 aa11.51□□□□□ -0.57
ELL3-206ENST00000497465 SLC4A1APQ9BWU0 796 aaKnown RBP11.51□□□□□ -0.57
ELL3-206ENST00000497465 MAPK8IP2Q13387 824 aaPredicted RBP11.44□□□□□ -0.58
ELL3-206ENST00000497465 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
ELL3-206ENST00000497465 DMRT2Q9Y5R5 561 aa11.29□□□□□ -0.6
ELL3-206ENST00000497465 POTEDQ86YR6 584 aa11.26□□□□□ -0.61
ELL3-206ENST00000497465 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
ELL3-206ENST00000497465 HOXD11P31277 338 aaPredicted RBP11.15□□□□□ -0.62
ELL3-206ENST00000497465 PABPN1Q86U42 306 aaKnown RBP eCLIP11.13□□□□□ -0.63
ELL3-206ENST00000497465 RB1CC1Q8TDY2 1594 aa11.08□□□□□ -0.64
ELL3-206ENST00000497465 ZBTB22O15209 634 aa11.03□□□□□ -0.64
ELL3-206ENST00000497465 DCAF8L2P0C7V8 631 aa11.02□□□□□ -0.65
ELL3-206ENST00000497465 FOXD4L1Q9NU39 408 aa11□□□□□ -0.65
ELL3-206ENST00000497465 DNAJC5Q9H3Z4 198 aa10.93□□□□□ -0.66
ELL3-206ENST00000497465 NACADO15069 1562 aa10.89□□□□□ -0.67
ELL3-206ENST00000497465 UNC13AQ9UPW8 1703 aa10.88□□□□□ -0.67
ELL3-206ENST00000497465 DCAF8L1A6NGE4 600 aa10.83□□□□□ -0.68
ELL3-206ENST00000497465 SLC4A2P04920 1241 aa10.82□□□□□ -0.68
ELL3-206ENST00000497465 BICRAQ9NZM4 1560 aa10.78□□□□□ -0.68
ELL3-206ENST00000497465 CECR2Q9BXF3 1484 aa10.76□□□□□ -0.69
ELL3-206ENST00000497465 MYCNP04198 464 aaPredicted RBP10.72□□□□□ -0.69
ELL3-206ENST00000497465 MYO15BQ96JP2 1530 aa10.72□□□□□ -0.69
ELL3-206ENST00000497465 CC2D2AQ9P2K1 1620 aa10.71□□□□□ -0.69
ELL3-206ENST00000497465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.67□□□□□ -0.7
ELL3-206ENST00000497465 ZCCHC6Q5VYS8 1495 aaKnown RBP10.65□□□□□ -0.7
ELL3-206ENST00000497465 DCAF1Q9Y4B6 1507 aa10.6□□□□□ -0.71
ELL3-206ENST00000497465 ATXN8OSP0DMR3 200 aa10.58□□□□□ -0.72
ELL3-206ENST00000497465 EIF4G1Q04637 1599 aaKnown RBP10.55□□□□□ -0.72
ELL3-206ENST00000497465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
ELL3-206ENST00000497465 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
ELL3-206ENST00000497465 SAMD1Q6SPF0 538 aaPredicted RBP10.49□□□□□ -0.73
ELL3-206ENST00000497465 U3KPZ7 1027 aaPredicted RBP10.49□□□□□ -0.73
ELL3-206ENST00000497465 SHROOM4Q9ULL8 1493 aa10.48□□□□□ -0.73
ELL3-206ENST00000497465 SCRIBQ14160 1630 aa10.46□□□□□ -0.74
ELL3-206ENST00000497465 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
ELL3-206ENST00000497465 APLP2Q06481 763 aa10.37□□□□□ -0.75
ELL3-206ENST00000497465 CUX2O14529 1486 aa10.36□□□□□ -0.75
ELL3-206ENST00000497465 ATF5Q9Y2D1 282 aaPredicted RBP10.33□□□□□ -0.76
ELL3-206ENST00000497465 ERCC6Q03468 1493 aa10.32□□□□□ -0.76
ELL3-206ENST00000497465 RNF39Q9H2S5 420 aa10.24□□□□□ -0.77
ELL3-206ENST00000497465 ZNF219Q9P2Y4 722 aaPredicted RBP10.19□□□□□ -0.78
ELL3-206ENST00000497465 C1QBPQ07021 282 aaKnown RBP10.15□□□□□ -0.78
ELL3-206ENST00000497465 FKBP8Q14318 412 aa10.14□□□□□ -0.79
ELL3-206ENST00000497465 NESP48681 1621 aa10.14□□□□□ -0.79
ELL3-206ENST00000497465 CAPN15O75808 1086 aa10.11□□□□□ -0.79
ELL3-206ENST00000497465 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
ELL3-206ENST00000497465 SPINK5Q9NQ38 1064 aaPredicted RBP10.11□□□□□ -0.79
ELL3-206ENST00000497465 NCAPD3P42695 1498 aa10.06□□□□□ -0.8
ELL3-206ENST00000497465 THOC2Q8NI27 1593 aaKnown RBP10.02□□□□□ -0.81
ELL3-206ENST00000497465 SMARCA2P51531 1590 aa10.01□□□□□ -0.81
ELL3-206ENST00000497465 ATAD2BQ9ULI0 1458 aa10.01□□□□□ -0.81
ELL3-206ENST00000497465 SMARCA4P51532 1647 aa10□□□□□ -0.81
ELL3-206ENST00000497465 POLA2Q14181 598 aa9.99□□□□□ -0.81
ELL3-206ENST00000497465 FBLN2P98095 1184 aa9.98□□□□□ -0.81
ELL3-206ENST00000497465 HMGXB3Q12766 1538 aa9.96□□□□□ -0.82
ELL3-206ENST00000497465 KIF21AQ7Z4S6 1674 aa9.96□□□□□ -0.82
ELL3-206ENST00000497465 BAZ1AQ9NRL2 1556 aaPredicted RBP9.94□□□□□ -0.82
ELL3-206ENST00000497465 OSCARQ8IYS5 282 aa9.93□□□□□ -0.82
ELL3-206ENST00000497465 ABCB7O75027 752 aa9.92□□□□□ -0.82
ELL3-206ENST00000497465 MKRN4PQ13434 485 aaPredicted RBP9.92□□□□□ -0.82
ELL3-206ENST00000497465 ZBTB12Q9Y330 459 aaPredicted RBP9.92□□□□□ -0.82
ELL3-206ENST00000497465 PEG3Q9GZU2 1588 aa9.92□□□□□ -0.82
ELL3-206ENST00000497465 BAZ1BQ9UIG0 1483 aaKnown RBP9.9□□□□□ -0.83
ELL3-206ENST00000497465 PDS5BQ9NTI5 1447 aa9.9□□□□□ -0.83
ELL3-206ENST00000497465 LAMC3Q9Y6N6 1575 aa9.89□□□□□ -0.83
ELL3-206ENST00000497465 SPDYE4A6NLX3 237 aa9.87□□□□□ -0.83
ELL3-206ENST00000497465 MROH2BQ7Z745 1585 aa9.84□□□□□ -0.83
ELL3-206ENST00000497465 DSG3P32926 999 aa9.83□□□□□ -0.84
ELL3-206ENST00000497465 MRC2Q9UBG0 1479 aa9.83□□□□□ -0.84
ELL3-206ENST00000497465 RIMBP3CA6NJZ7 1639 aa9.79□□□□□ -0.84
ELL3-206ENST00000497465 RIMBP3BA6NNM3 1639 aa9.79□□□□□ -0.84
ELL3-206ENST00000497465 RIMBP3Q9UFD9 1639 aa9.79□□□□□ -0.84
ELL3-206ENST00000497465 CACNB1Q02641 598 aaPredicted RBP9.79□□□□□ -0.84
ELL3-206ENST00000497465 CYB5RLQ6IPT4 315 aa9.79□□□□□ -0.84
ELL3-206ENST00000497465 CADPSQ9ULU8 1353 aa9.78□□□□□ -0.84
ELL3-206ENST00000497465 WDR62O43379 1518 aa9.77□□□□□ -0.84
ELL3-206ENST00000497465 AMER1Q5JTC6 1135 aaPredicted RBP9.77□□□□□ -0.85
ELL3-206ENST00000497465 WIZO95785 1651 aa9.74□□□□□ -0.85
ELL3-206ENST00000497465 FBXO3Q9UK99 471 aa9.74□□□□□ -0.85
ELL3-206ENST00000497465 SLC24A1O60721 1099 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms