RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 PIP4P2Q8N4L2 257 aa10.82□□□□□ -0.68
UBE3C-208ENST00000497368 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
UBE3C-208ENST00000497368 FXR2P51116 673 aaKnown RBP eCLIP10.8□□□□□ -0.681e-9■■■□□ 14.6
UBE3C-208ENST00000497368 PRR29P0C7W0 189 aa10.77□□□□□ -0.69
UBE3C-208ENST00000497368 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
UBE3C-208ENST00000497368 TOP2AP11388 1531 aaKnown RBP10.72□□□□□ -0.69
UBE3C-208ENST00000497368 PRKAR2AP13861 404 aaKnown RBP10.71□□□□□ -0.69
UBE3C-208ENST00000497368 CHADLQ6NUI6 762 aa10.71□□□□□ -0.69
UBE3C-208ENST00000497368 RSF1Q96T23 1441 aaPredicted RBP10.71□□□□□ -0.69
UBE3C-208ENST00000497368 PRDM2Q13029 1718 aa10.7□□□□□ -0.7
UBE3C-208ENST00000497368 WDR62O43379 1518 aa10.7□□□□□ -0.7
UBE3C-208ENST00000497368 DNAJC5Q9H3Z4 198 aa10.69□□□□□ -0.7
UBE3C-208ENST00000497368 CADPSQ9ULU8 1353 aa10.66□□□□□ -0.7
UBE3C-208ENST00000497368 MRC2Q9UBG0 1479 aa10.65□□□□□ -0.7
UBE3C-208ENST00000497368 PDS5BQ9NTI5 1447 aa10.64□□□□□ -0.71
UBE3C-208ENST00000497368 CFTRP13569 1480 aa10.63□□□□□ -0.71
UBE3C-208ENST00000497368 CREBZFQ9NS37 354 aa10.61□□□□□ -0.71
UBE3C-208ENST00000497368 CEP164Q9UPV0 1460 aa10.6□□□□□ -0.71
UBE3C-208ENST00000497368 URB2Q14146 1524 aaKnown RBP10.59□□□□□ -0.71
UBE3C-208ENST00000497368 FANCD2Q9BXW9 1451 aa10.59□□□□□ -0.71
UBE3C-208ENST00000497368 CCDC88BA6NC98 1476 aa10.55□□□□□ -0.72
UBE3C-208ENST00000497368 FARP1Q9Y4F1 1045 aaPredicted RBP10.54□□□□□ -0.72
UBE3C-208ENST00000497368 HAX1O00165 279 aa10.52□□□□□ -0.73
UBE3C-208ENST00000497368 FBXO3Q9UK99 471 aa10.51□□□□□ -0.73
UBE3C-208ENST00000497368 MIER1Q8N108 512 aa10.5□□□□□ -0.73
UBE3C-208ENST00000497368 MNX1P50219 401 aaPredicted RBP10.47□□□□□ -0.73
UBE3C-208ENST00000497368 EVX2Q03828 476 aa10.46□□□□□ -0.73
UBE3C-208ENST00000497368 PLCD3Q8N3E9 789 aa10.46□□□□□ -0.73
UBE3C-208ENST00000497368 TOPBP1Q92547 1522 aa10.44□□□□□ -0.74
UBE3C-208ENST00000497368 C19orf67A6NJJ6 358 aa10.44□□□□□ -0.74
UBE3C-208ENST00000497368 TARBP1Q13395 1621 aaKnown RBP10.44□□□□□ -0.74
UBE3C-208ENST00000497368 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
UBE3C-208ENST00000497368 DNMBPQ6XZF7 1577 aa10.43□□□□□ -0.74
UBE3C-208ENST00000497368 ZNF608Q9ULD9 1512 aaPredicted RBP10.43□□□□□ -0.74
UBE3C-208ENST00000497368 PLEKHG5O94827 1062 aa10.41□□□□□ -0.74
UBE3C-208ENST00000497368 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
UBE3C-208ENST00000497368 CD44P16070 742 aaKnown RBP10.4□□□□□ -0.74
UBE3C-208ENST00000497368 NPM1P06748 294 aaKnown RBP eCLIP10.39□□□□□ -0.75
UBE3C-208ENST00000497368 WDR97A6NE52 1622 aa10.38□□□□□ -0.75
UBE3C-208ENST00000497368 CHD1O14646 1710 aa10.38□□□□□ -0.75
UBE3C-208ENST00000497368 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
UBE3C-208ENST00000497368 SP7Q8TDD2 431 aaPredicted RBP10.35□□□□□ -0.75
UBE3C-208ENST00000497368 POLA1P09884 1462 aaPredicted RBP10.35□□□□□ -0.75
UBE3C-208ENST00000497368 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
UBE3C-208ENST00000497368 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
UBE3C-208ENST00000497368 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
UBE3C-208ENST00000497368 CUX1P39880 1505 aa10.33□□□□□ -0.76
UBE3C-208ENST00000497368 ZBTB47Q9UFB7 747 aaPredicted RBP10.31□□□□□ -0.76
UBE3C-208ENST00000497368 ZRANB1Q9UGI0 708 aa10.31□□□□□ -0.76
UBE3C-208ENST00000497368 ABCC8Q09428 1581 aa10.3□□□□□ -0.76
UBE3C-208ENST00000497368 KLHL34Q8N239 644 aa10.29□□□□□ -0.76
UBE3C-208ENST00000497368 RAD54L2Q9Y4B4 1467 aa10.29□□□□□ -0.76
UBE3C-208ENST00000497368 RASEFQ8IZ41 740 aa10.28□□□□□ -0.76
UBE3C-208ENST00000497368 FGD5Q6ZNL6 1462 aa10.28□□□□□ -0.76
UBE3C-208ENST00000497368 IFNLR1Q8IU57 520 aaPredicted RBP10.27□□□□□ -0.77
UBE3C-208ENST00000497368 TSPYL2Q9H2G4 693 aaPredicted RBP10.27□□□□□ -0.77
UBE3C-208ENST00000497368 PBRM1Q86U86 1689 aa10.27□□□□□ -0.77
UBE3C-208ENST00000497368 AQRO60306 1485 aaKnown RBP eCLIP10.26□□□□□ -0.77
UBE3C-208ENST00000497368 PAK3O75914 559 aaPredicted RBP10.26□□□□□ -0.77
UBE3C-208ENST00000497368 NUBP1P53384 320 aa10.26□□□□□ -0.77
UBE3C-208ENST00000497368 ARHGEF11O15085 1522 aa10.25□□□□□ -0.77
UBE3C-208ENST00000497368 ABCA5Q8WWZ7 1642 aa10.25□□□□□ -0.77
UBE3C-208ENST00000497368 CLASP1Q7Z460 1538 aa10.23□□□□□ -0.77
UBE3C-208ENST00000497368 ZNF579Q8NAF0 562 aaKnown RBP10.23□□□□□ -0.77
UBE3C-208ENST00000497368 BIVM-ERCC5R4GMW8 1640 aa10.22□□□□□ -0.77
UBE3C-208ENST00000497368 PHF12Q96QT6 1004 aa10.22□□□□□ -0.77
UBE3C-208ENST00000497368 GABBR2O75899 941 aa10.21□□□□□ -0.77
UBE3C-208ENST00000497368 SNAPC4Q5SXM2 1469 aa10.21□□□□□ -0.78
UBE3C-208ENST00000497368 SYNJ1O43426 1573 aa10.2□□□□□ -0.78
UBE3C-208ENST00000497368 ARAP1Q96P48 1450 aa10.19□□□□□ -0.78
UBE3C-208ENST00000497368 CCDC61Q9Y6R9 512 aa10.18□□□□□ -0.78
UBE3C-208ENST00000497368 SOGA1O94964 1423 aa10.17□□□□□ -0.78
UBE3C-208ENST00000497368 TRIM41Q8WV44 630 aa10.17□□□□□ -0.78
UBE3C-208ENST00000497368 TOP2BQ02880 1626 aa10.17□□□□□ -0.78
UBE3C-208ENST00000497368 TDRD9Q8NDG6 1382 aaKnown RBP10.16□□□□□ -0.78
UBE3C-208ENST00000497368 FAM212AQ96EL1 285 aa10.16□□□□□ -0.78
UBE3C-208ENST00000497368 ABCA10Q8WWZ4 1543 aa10.16□□□□□ -0.78
UBE3C-208ENST00000497368 ADAMTS12P58397 1594 aa10.15□□□□□ -0.78
UBE3C-208ENST00000497368 SPOCK2Q92563 424 aa10.15□□□□□ -0.78
UBE3C-208ENST00000497368 MAGI1Q96QZ7 1491 aaPredicted RBP10.15□□□□□ -0.78
UBE3C-208ENST00000497368 GRIN2BQ13224 1484 aa10.13□□□□□ -0.79
UBE3C-208ENST00000497368 DCAF8Q5TAQ9 597 aa10.13□□□□□ -0.79
UBE3C-208ENST00000497368 SYNJ2O15056 1496 aa10.11□□□□□ -0.79
UBE3C-208ENST00000497368 GALR2O43603 387 aaPredicted RBP10.11□□□□□ -0.79
UBE3C-208ENST00000497368 CEP170Q5SW79 1584 aa10.1□□□□□ -0.79
UBE3C-208ENST00000497368 ERCC6L2Q5T890 1561 aa10.1□□□□□ -0.79
UBE3C-208ENST00000497368 GAPVD1Q14C86 1478 aa10.1□□□□□ -0.79
UBE3C-208ENST00000497368 KIF12Q96FN5 646 aa10.09□□□□□ -0.79
UBE3C-208ENST00000497368 SHROOM2Q13796 1616 aa10.08□□□□□ -0.8
UBE3C-208ENST00000497368 CLCN6P51797 869 aa10.08□□□□□ -0.8
UBE3C-208ENST00000497368 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
UBE3C-208ENST00000497368 MAP3K13O43283 966 aa10.07□□□□□ -0.8
UBE3C-208ENST00000497368 SUPT5HO00267 1087 aaKnown RBP10.06□□□□□ -0.8
UBE3C-208ENST00000497368 PYGBP11216 843 aa10.06□□□□□ -0.8
UBE3C-208ENST00000497368 GSE1Q14687 1217 aa10.06□□□□□ -0.8
UBE3C-208ENST00000497368 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
UBE3C-208ENST00000497368 WRNQ14191 1432 aaPredicted RBP eCLIP10.05□□□□□ -0.8
UBE3C-208ENST00000497368 GRIN2AQ12879 1464 aa10.04□□□□□ -0.8
UBE3C-208ENST00000497368 NUP160Q12769 1436 aa10.03□□□□□ -0.8
UBE3C-208ENST00000497368 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms