RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-208ENST00000496854 PITPNM1O00562 1244 aa15.24■□□□□ 0.03
ITGAV-208ENST00000496854 SPDYE1Q8NFV5 336 aaPredicted RBP15.21■□□□□ 0.03
ITGAV-208ENST00000496854 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
ITGAV-208ENST00000496854 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
ITGAV-208ENST00000496854 TOP2AP11388 1531 aaKnown RBP15.19■□□□□ 0.02
ITGAV-208ENST00000496854 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
ITGAV-208ENST00000496854 RSF1Q96T23 1441 aaPredicted RBP15.16■□□□□ 0.02
ITGAV-208ENST00000496854 CFTRP13569 1480 aa15.14■□□□□ 0.01
ITGAV-208ENST00000496854 FKBP8Q14318 412 aa15.14■□□□□ 0.01
ITGAV-208ENST00000496854 PRDM2Q13029 1718 aa15.12■□□□□ 0.01
ITGAV-208ENST00000496854 URB2Q14146 1524 aaKnown RBP15.09■□□□□ 0.01
ITGAV-208ENST00000496854 POTEHQ6S545 545 aa15.07■□□□□ 0
ITGAV-208ENST00000496854 PRR29P0C7W0 189 aa15.01□□□□□ -0.01
ITGAV-208ENST00000496854 PIP4P2Q8N4L2 257 aa15.01□□□□□ -0.01
ITGAV-208ENST00000496854 FXR2P51116 673 aaKnown RBP eCLIP14.98□□□□□ -0.01
ITGAV-208ENST00000496854 PROM2Q8N271 834 aa14.98□□□□□ -0.01
ITGAV-208ENST00000496854 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
ITGAV-208ENST00000496854 TRIM41Q8WV44 630 aa14.96□□□□□ -0.01
ITGAV-208ENST00000496854 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
ITGAV-208ENST00000496854 ZNF608Q9ULD9 1512 aaPredicted RBP14.91□□□□□ -0.02
ITGAV-208ENST00000496854 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
ITGAV-208ENST00000496854 TOPBP1Q92547 1522 aa14.89□□□□□ -0.03
ITGAV-208ENST00000496854 IFT140Q96RY7 1462 aa14.88□□□□□ -0.03
ITGAV-208ENST00000496854 PRKAR2AP13861 404 aaKnown RBP14.87□□□□□ -0.03
ITGAV-208ENST00000496854 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
ITGAV-208ENST00000496854 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
ITGAV-208ENST00000496854 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
ITGAV-208ENST00000496854 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
ITGAV-208ENST00000496854 CHADLQ6NUI6 762 aa14.82□□□□□ -0.04
ITGAV-208ENST00000496854 TARBP1Q13395 1621 aaKnown RBP14.81□□□□□ -0.04
ITGAV-208ENST00000496854 CHD1O14646 1710 aa14.8□□□□□ -0.04
ITGAV-208ENST00000496854 ARHGEF11O15085 1522 aa14.77□□□□□ -0.04
ITGAV-208ENST00000496854 ABCC8Q09428 1581 aa14.77□□□□□ -0.05
ITGAV-208ENST00000496854 POLA1P09884 1462 aaPredicted RBP14.75□□□□□ -0.05
ITGAV-208ENST00000496854 AQRO60306 1485 aaKnown RBP eCLIP14.7□□□□□ -0.06
ITGAV-208ENST00000496854 CREBZFQ9NS37 354 aa14.7□□□□□ -0.06
ITGAV-208ENST00000496854 RAD54L2Q9Y4B4 1467 aa14.67□□□□□ -0.06
ITGAV-208ENST00000496854 FBXO3Q9UK99 471 aa14.66□□□□□ -0.06
ITGAV-208ENST00000496854 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
ITGAV-208ENST00000496854 FGD5Q6ZNL6 1462 aa14.64□□□□□ -0.07
ITGAV-208ENST00000496854 HAX1O00165 279 aa14.64□□□□□ -0.07
ITGAV-208ENST00000496854 FARP1Q9Y4F1 1045 aaPredicted RBP14.64□□□□□ -0.07
ITGAV-208ENST00000496854 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
ITGAV-208ENST00000496854 CUX1P39880 1505 aa14.63□□□□□ -0.07
ITGAV-208ENST00000496854 MIER1Q8N108 512 aa14.63□□□□□ -0.07
ITGAV-208ENST00000496854 SNAPC4Q5SXM2 1469 aa14.62□□□□□ -0.07
ITGAV-208ENST00000496854 CLASP1Q7Z460 1538 aa14.6□□□□□ -0.07
ITGAV-208ENST00000496854 PLEKHG5O94827 1062 aa14.59□□□□□ -0.07
ITGAV-208ENST00000496854 PLCD3Q8N3E9 789 aa14.58□□□□□ -0.08
ITGAV-208ENST00000496854 PBRM1Q86U86 1689 aa14.58□□□□□ -0.08
ITGAV-208ENST00000496854 TDRD9Q8NDG6 1382 aaKnown RBP14.58□□□□□ -0.08
ITGAV-208ENST00000496854 SOGA1O94964 1423 aa14.58□□□□□ -0.08
ITGAV-208ENST00000496854 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
ITGAV-208ENST00000496854 SYNJ1O43426 1573 aa14.53□□□□□ -0.08
ITGAV-208ENST00000496854 ABCA5Q8WWZ7 1642 aa14.52□□□□□ -0.08
ITGAV-208ENST00000496854 GRIN2BQ13224 1484 aa14.51□□□□□ -0.09
ITGAV-208ENST00000496854 CYB5RLQ6IPT4 315 aa14.5□□□□□ -0.09
ITGAV-208ENST00000496854 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.09
ITGAV-208ENST00000496854 MNX1P50219 401 aaPredicted RBP14.49□□□□□ -0.09
ITGAV-208ENST00000496854 SYNJ2O15056 1496 aa14.49□□□□□ -0.09
ITGAV-208ENST00000496854 C19orf67A6NJJ6 358 aa14.48□□□□□ -0.09
ITGAV-208ENST00000496854 VASPP50552 380 aaPredicted RBP14.46□□□□□ -0.09
ITGAV-208ENST00000496854 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.1
ITGAV-208ENST00000496854 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
ITGAV-208ENST00000496854 EVX2Q03828 476 aa14.44□□□□□ -0.1
ITGAV-208ENST00000496854 CD44P16070 742 aaKnown RBP14.43□□□□□ -0.1
ITGAV-208ENST00000496854 BIVM-ERCC5R4GMW8 1640 aa14.42□□□□□ -0.1
ITGAV-208ENST00000496854 ADAMTS12P58397 1594 aa14.42□□□□□ -0.1
ITGAV-208ENST00000496854 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
ITGAV-208ENST00000496854 CHMP7Q8WUX9 453 aaPredicted RBP14.39□□□□□ -0.11
ITGAV-208ENST00000496854 TOP2BQ02880 1626 aa14.38□□□□□ -0.11
ITGAV-208ENST00000496854 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
ITGAV-208ENST00000496854 CEP170Q5SW79 1584 aa14.37□□□□□ -0.11
ITGAV-208ENST00000496854 ERCC6L2Q5T890 1561 aa14.37□□□□□ -0.11
ITGAV-208ENST00000496854 GRIN2AQ12879 1464 aa14.36□□□□□ -0.11
ITGAV-208ENST00000496854 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
ITGAV-208ENST00000496854 KLHL34Q8N239 644 aa14.33□□□□□ -0.12
ITGAV-208ENST00000496854 ZRANB1Q9UGI0 708 aa14.33□□□□□ -0.12
ITGAV-208ENST00000496854 SUPT5HO00267 1087 aaKnown RBP14.32□□□□□ -0.12
ITGAV-208ENST00000496854 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
ITGAV-208ENST00000496854 NUP160Q12769 1436 aa14.31□□□□□ -0.12
ITGAV-208ENST00000496854 WRNQ14191 1432 aaPredicted RBP eCLIP14.31□□□□□ -0.12
ITGAV-208ENST00000496854 ERICH3Q5RHP9 1530 aa14.27□□□□□ -0.12
ITGAV-208ENST00000496854 TSPYL2Q9H2G4 693 aaPredicted RBP14.27□□□□□ -0.13
ITGAV-208ENST00000496854 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
ITGAV-208ENST00000496854 RUSC2Q8N2Y8 1516 aa14.24□□□□□ -0.13
ITGAV-208ENST00000496854 IFNLR1Q8IU57 520 aaPredicted RBP14.23□□□□□ -0.13
ITGAV-208ENST00000496854 RASEFQ8IZ41 740 aa14.23□□□□□ -0.13
ITGAV-208ENST00000496854 NUBP1P53384 320 aa14.21□□□□□ -0.13
ITGAV-208ENST00000496854 ZNF579Q8NAF0 562 aaKnown RBP14.2□□□□□ -0.14
ITGAV-208ENST00000496854 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
ITGAV-208ENST00000496854 GABBR2O75899 941 aa14.16□□□□□ -0.14
ITGAV-208ENST00000496854 FAM212AQ96EL1 285 aa14.15□□□□□ -0.14
ITGAV-208ENST00000496854 PHF12Q96QT6 1004 aa14.15□□□□□ -0.14
ITGAV-208ENST00000496854 SPOCK2Q92563 424 aa14.13□□□□□ -0.15
ITGAV-208ENST00000496854 DCAF8Q5TAQ9 597 aa14.12□□□□□ -0.15
ITGAV-208ENST00000496854 PRG4Q92954 1404 aaPredicted RBP14.12□□□□□ -0.15
ITGAV-208ENST00000496854 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
ITGAV-208ENST00000496854 CLCN6P51797 869 aa14.1□□□□□ -0.15
ITGAV-208ENST00000496854 CUL7Q14999 1698 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms