RNA–Protein interactions for RNA: ENST00000495571.5

VWA3B-220, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 2,711 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-220ENST00000495571 CDK11AQ9UQ88 783 aaPredicted RBP12.09□□□□□ -0.47
VWA3B-220ENST00000495571 ERCC6Q03468 1493 aa12.09□□□□□ -0.47
VWA3B-220ENST00000495571 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
VWA3B-220ENST00000495571 HIRIP3Q9BW71 556 aaPredicted RBP12.08□□□□□ -0.48
VWA3B-220ENST00000495571 CUX2O14529 1486 aa12.07□□□□□ -0.48
VWA3B-220ENST00000495571 WDR62O43379 1518 aa12.07□□□□□ -0.48
VWA3B-220ENST00000495571 DHX57Q6P158 1386 aaKnown RBP12.07□□□□□ -0.48
VWA3B-220ENST00000495571 ERICH6BQ5W0A0 696 aa12.06□□□□□ -0.48
VWA3B-220ENST00000495571 UBTFP17480 764 aaKnown RBP12.05□□□□□ -0.48
VWA3B-220ENST00000495571 NOP58Q9Y2X3 529 aaKnown RBP12.04□□□□□ -0.48
VWA3B-220ENST00000495571 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
VWA3B-220ENST00000495571 EIF5BO60841 1220 aaKnown RBP12.02□□□□□ -0.48
VWA3B-220ENST00000495571 DNMBPQ6XZF7 1577 aa12.02□□□□□ -0.48
VWA3B-220ENST00000495571 SOGA1O94964 1423 aa12.01□□□□□ -0.49
VWA3B-220ENST00000495571 PLEKHG5O94827 1062 aa12□□□□□ -0.49
VWA3B-220ENST00000495571 RANGAP1P46060 587 aaPredicted RBP12□□□□□ -0.49
VWA3B-220ENST00000495571 RUSC2Q8N2Y8 1516 aa11.99□□□□□ -0.49
VWA3B-220ENST00000495571 B4GALNT3Q6L9W6 998 aa11.99□□□□□ -0.49
VWA3B-220ENST00000495571 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
VWA3B-220ENST00000495571 TNIKQ9UKE5 1360 aa11.97□□□□□ -0.49
VWA3B-220ENST00000495571 PKNOX2Q96KN3 472 aa11.97□□□□□ -0.49
VWA3B-220ENST00000495571 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
VWA3B-220ENST00000495571 TIMELESSQ9UNS1 1208 aa11.97□□□□□ -0.49
VWA3B-220ENST00000495571 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.49
VWA3B-220ENST00000495571 BRPF3Q9ULD4 1205 aa11.95□□□□□ -0.5
VWA3B-220ENST00000495571 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
VWA3B-220ENST00000495571 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
VWA3B-220ENST00000495571 PPP1R15AO75807 674 aaPredicted RBP11.93□□□□□ -0.5
VWA3B-220ENST00000495571 CUX1P39880 1505 aa11.9□□□□□ -0.5
VWA3B-220ENST00000495571 SIN3AQ96ST3 1273 aa11.9□□□□□ -0.5
VWA3B-220ENST00000495571 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
VWA3B-220ENST00000495571 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
VWA3B-220ENST00000495571 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
VWA3B-220ENST00000495571 LAS1LQ9Y4W2 734 aaKnown RBP11.88□□□□□ -0.51
VWA3B-220ENST00000495571 TARBP1Q13395 1621 aaKnown RBP11.85□□□□□ -0.51
VWA3B-220ENST00000495571 PPP4R2Q9NY27 417 aa11.85□□□□□ -0.51
VWA3B-220ENST00000495571 SYNJ1O43426 1573 aa11.84□□□□□ -0.51
VWA3B-220ENST00000495571 WASHC2AQ641Q2 1341 aa11.84□□□□□ -0.51
VWA3B-220ENST00000495571 IPO9Q96P70 1041 aaKnown RBP11.83□□□□□ -0.52
VWA3B-220ENST00000495571 CLIP1P30622 1438 aa11.83□□□□□ -0.52
VWA3B-220ENST00000495571 POLA1P09884 1462 aaPredicted RBP11.83□□□□□ -0.52
VWA3B-220ENST00000495571 ANP32CO43423 234 aa11.82□□□□□ -0.52
VWA3B-220ENST00000495571 FGD5Q6ZNL6 1462 aa11.82□□□□□ -0.52
VWA3B-220ENST00000495571 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
VWA3B-220ENST00000495571 CCER2I3L3R5 266 aa11.8□□□□□ -0.52
VWA3B-220ENST00000495571 NEFMP07197 916 aa11.8□□□□□ -0.52
VWA3B-220ENST00000495571 CCDC184Q52MB2 194 aa11.8□□□□□ -0.52
VWA3B-220ENST00000495571 KANK4Q5T7N3 995 aaPredicted RBP11.8□□□□□ -0.52
VWA3B-220ENST00000495571 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
VWA3B-220ENST00000495571 NPM2Q86SE8 214 aaKnown RBP11.79□□□□□ -0.52
VWA3B-220ENST00000495571 ABCA5Q8WWZ7 1642 aa11.77□□□□□ -0.53
VWA3B-220ENST00000495571 WASHC2CQ9Y4E1 1318 aa11.76□□□□□ -0.53
VWA3B-220ENST00000495571 SENP3-EIF4A1A0A087X0R7 540 aa11.76□□□□□ -0.53
VWA3B-220ENST00000495571 ZMYND15Q9H091 742 aa11.76□□□□□ -0.53
VWA3B-220ENST00000495571 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
VWA3B-220ENST00000495571 MAPKBP1O60336 1514 aa11.75□□□□□ -0.53
VWA3B-220ENST00000495571 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
VWA3B-220ENST00000495571 ANP32AP39687 249 aaKnown RBP11.74□□□□□ -0.53
VWA3B-220ENST00000495571 VPS8Q8N3P4 1428 aa11.74□□□□□ -0.53
VWA3B-220ENST00000495571 GOLGA3Q08378 1498 aa11.74□□□□□ -0.53
VWA3B-220ENST00000495571 SLC24A1O60721 1099 aa11.73□□□□□ -0.53
VWA3B-220ENST00000495571 VSIG10Q8N0Z9 540 aa11.73□□□□□ -0.53
VWA3B-220ENST00000495571 PODXL2Q9NZ53 605 aa11.73□□□□□ -0.53
VWA3B-220ENST00000495571 PBRM1Q86U86 1689 aa11.72□□□□□ -0.53
VWA3B-220ENST00000495571 ERICH3Q5RHP9 1530 aa11.7□□□□□ -0.54
VWA3B-220ENST00000495571 RAD54L2Q9Y4B4 1467 aa11.68□□□□□ -0.54
VWA3B-220ENST00000495571 GRIN2BQ13224 1484 aa11.68□□□□□ -0.54
VWA3B-220ENST00000495571 FRAT1Q92837 279 aaPredicted RBP11.68□□□□□ -0.54
VWA3B-220ENST00000495571 MAGI1Q96QZ7 1491 aaPredicted RBP11.68□□□□□ -0.54
VWA3B-220ENST00000495571 DCAF11Q8TEB1 546 aa11.67□□□□□ -0.54
VWA3B-220ENST00000495571 RAB3GAP2Q9H2M9 1393 aa11.67□□□□□ -0.54
VWA3B-220ENST00000495571 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
VWA3B-220ENST00000495571 CUL7Q14999 1698 aa11.66□□□□□ -0.54
VWA3B-220ENST00000495571 GAPVD1Q14C86 1478 aa11.66□□□□□ -0.54
VWA3B-220ENST00000495571 FAM9BQ8IZU0 186 aa11.66□□□□□ -0.54
VWA3B-220ENST00000495571 ZNF608Q9ULD9 1512 aaPredicted RBP11.66□□□□□ -0.54
VWA3B-220ENST00000495571 EEA1Q15075 1411 aa11.65□□□□□ -0.54
VWA3B-220ENST00000495571 AKNAQ7Z591 1439 aa11.65□□□□□ -0.55
VWA3B-220ENST00000495571 KIF27Q86VH2 1401 aa11.65□□□□□ -0.55
VWA3B-220ENST00000495571 SLC4A3P48751 1232 aa11.65□□□□□ -0.55
VWA3B-220ENST00000495571 GSE1Q14687 1217 aa11.64□□□□□ -0.55
VWA3B-220ENST00000495571 SKAP1Q86WV1 359 aa11.64□□□□□ -0.55
VWA3B-220ENST00000495571 KIF21BO75037 1637 aa11.63□□□□□ -0.55
VWA3B-220ENST00000495571 ADAMTS12P58397 1594 aa11.62□□□□□ -0.55
VWA3B-220ENST00000495571 RSPH6AQ9H0K4 717 aa11.6□□□□□ -0.55
VWA3B-220ENST00000495571 RAPGEF2Q9Y4G8 1499 aa11.6□□□□□ -0.55
VWA3B-220ENST00000495571 AQRO60306 1485 aaKnown RBP eCLIP11.59□□□□□ -0.55
VWA3B-220ENST00000495571 SYNJ2O15056 1496 aa11.58□□□□□ -0.56
VWA3B-220ENST00000495571 RRAGDQ9NQL2 400 aaPredicted RBP11.58□□□□□ -0.56
VWA3B-220ENST00000495571 NFKBIBQ15653 356 aa11.58□□□□□ -0.56
VWA3B-220ENST00000495571 FHAD1B1AJZ9 1412 aa11.58□□□□□ -0.56
VWA3B-220ENST00000495571 SNAPC4Q5SXM2 1469 aa11.58□□□□□ -0.56
VWA3B-220ENST00000495571 CHD1O14646 1710 aa11.57□□□□□ -0.56
VWA3B-220ENST00000495571 TDRD9Q8NDG6 1382 aaKnown RBP11.57□□□□□ -0.56
VWA3B-220ENST00000495571 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
VWA3B-220ENST00000495571 USP35Q9P2H5 1018 aa11.57□□□□□ -0.56
VWA3B-220ENST00000495571 RRBP1Q9P2E9 1410 aaKnown RBP11.56□□□□□ -0.56
VWA3B-220ENST00000495571 A0A0U1RQG5 324 aaPredicted RBP11.56□□□□□ -0.56
VWA3B-220ENST00000495571 CCNB3Q8WWL7 1395 aa11.55□□□□□ -0.56
VWA3B-220ENST00000495571 PDE4AP27815 886 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms