RNA–Protein interactions for RNA: ENST00000495571.5

VWA3B-220, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 2,711 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-220ENST00000495571 NISCHQ9Y2I1 1504 aa16.54■□□□□ 0.24
VWA3B-220ENST00000495571 CCDC180Q9P1Z9 1646 aa14.82□□□□□ -0.04
VWA3B-220ENST00000495571 HRCP23327 699 aa14.78□□□□□ -0.04
VWA3B-220ENST00000495571 PPARGC1BQ86YN6 1023 aaKnown RBP14.77□□□□□ -0.04
VWA3B-220ENST00000495571 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
VWA3B-220ENST00000495571 PCGF6Q9BYE7 350 aa14.42□□□□□ -0.1
VWA3B-220ENST00000495571 SCAF1Q9H7N4 1312 aaKnown RBP14.37□□□□□ -0.11
VWA3B-220ENST00000495571 MYO15BQ96JP2 1530 aa14.14□□□□□ -0.15
VWA3B-220ENST00000495571 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
VWA3B-220ENST00000495571 ABCC9O60706 1549 aa13.97□□□□□ -0.17
VWA3B-220ENST00000495571 MYT1Q01538 1121 aa13.95□□□□□ -0.18
VWA3B-220ENST00000495571 SHROOM4Q9ULL8 1493 aa13.93□□□□□ -0.18
VWA3B-220ENST00000495571 DCAF1Q9Y4B6 1507 aa13.87□□□□□ -0.19
VWA3B-220ENST00000495571 ZCCHC6Q5VYS8 1495 aaKnown RBP13.84□□□□□ -0.19
VWA3B-220ENST00000495571 NACADO15069 1562 aa13.82□□□□□ -0.2
VWA3B-220ENST00000495571 NEUROD1Q13562 356 aa13.81□□□□□ -0.2
VWA3B-220ENST00000495571 CHIC1Q5VXU3 224 aa13.79□□□□□ -0.2
VWA3B-220ENST00000495571 RB1CC1Q8TDY2 1594 aa13.76□□□□□ -0.21
VWA3B-220ENST00000495571 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
VWA3B-220ENST00000495571 LOC105371045A0A1W2PR82 267 aa13.72□□□□□ -0.21
VWA3B-220ENST00000495571 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
VWA3B-220ENST00000495571 TRIM26Q12899 539 aaPredicted RBP13.62□□□□□ -0.23
VWA3B-220ENST00000495571 BCL11AQ9H165 835 aa13.49□□□□□ -0.25
VWA3B-220ENST00000495571 FAM9AQ8IZU1 332 aaPredicted RBP13.49□□□□□ -0.25
VWA3B-220ENST00000495571 DCAF8L2P0C7V8 631 aa13.48□□□□□ -0.25
VWA3B-220ENST00000495571 ZEB1P37275 1124 aaPredicted RBP13.45□□□□□ -0.26
VWA3B-220ENST00000495571 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
VWA3B-220ENST00000495571 CENPBP07199 599 aaPredicted RBP13.31□□□□□ -0.28
VWA3B-220ENST00000495571 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
VWA3B-220ENST00000495571 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
VWA3B-220ENST00000495571 DIEXFQ68CQ4 756 aaKnown RBP13.28□□□□□ -0.28
VWA3B-220ENST00000495571 BICRAQ9NZM4 1560 aa13.26□□□□□ -0.29
VWA3B-220ENST00000495571 SCRIBQ14160 1630 aa13.26□□□□□ -0.29
VWA3B-220ENST00000495571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
VWA3B-220ENST00000495571 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
VWA3B-220ENST00000495571 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
VWA3B-220ENST00000495571 TTBK1Q5TCY1 1321 aaPredicted RBP13.15□□□□□ -0.3
VWA3B-220ENST00000495571 ANP32EQ9BTT0 268 aa13.13□□□□□ -0.31
VWA3B-220ENST00000495571 CCER1Q8TC90 406 aaPredicted RBP13.08□□□□□ -0.32
VWA3B-220ENST00000495571 MIER1Q8N108 512 aa13.01□□□□□ -0.33
VWA3B-220ENST00000495571 TSHZ2Q9NRE2 1034 aa13.01□□□□□ -0.33
VWA3B-220ENST00000495571 TRIM41Q8WV44 630 aa13□□□□□ -0.33
VWA3B-220ENST00000495571 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
VWA3B-220ENST00000495571 SUPT16HQ9Y5B9 1047 aaKnown RBP12.92□□□□□ -0.34
VWA3B-220ENST00000495571 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
VWA3B-220ENST00000495571 ZNF316A6NFI3 1004 aaPredicted RBP12.86□□□□□ -0.35
VWA3B-220ENST00000495571 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
VWA3B-220ENST00000495571 SMARCA4P51532 1647 aa12.82□□□□□ -0.36
VWA3B-220ENST00000495571 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
VWA3B-220ENST00000495571 CC2D2AQ9P2K1 1620 aa12.78□□□□□ -0.36
VWA3B-220ENST00000495571 BCANQ96GW7 911 aa12.75□□□□□ -0.37
VWA3B-220ENST00000495571 SMARCA2P51531 1590 aa12.75□□□□□ -0.37
VWA3B-220ENST00000495571 ANO8Q9HCE9 1232 aaPredicted RBP12.74□□□□□ -0.37
VWA3B-220ENST00000495571 CECR2Q9BXF3 1484 aa12.72□□□□□ -0.37
VWA3B-220ENST00000495571 HMGXB3Q12766 1538 aa12.71□□□□□ -0.38
VWA3B-220ENST00000495571 MSH5O43196 834 aa12.68□□□□□ -0.38
VWA3B-220ENST00000495571 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
VWA3B-220ENST00000495571 NCAPD3P42695 1498 aa12.68□□□□□ -0.38
VWA3B-220ENST00000495571 MROH2BQ7Z745 1585 aa12.66□□□□□ -0.38
VWA3B-220ENST00000495571 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
VWA3B-220ENST00000495571 RBM19Q9Y4C8 960 aaKnown RBP12.63□□□□□ -0.39
VWA3B-220ENST00000495571 APLP2Q06481 763 aa12.61□□□□□ -0.39
VWA3B-220ENST00000495571 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
VWA3B-220ENST00000495571 KCNH8Q96L42 1107 aa12.58□□□□□ -0.4
VWA3B-220ENST00000495571 ERICH6Q7L0X2 663 aa12.57□□□□□ -0.4
VWA3B-220ENST00000495571 ITGAEP38570 1179 aa12.56□□□□□ -0.4
VWA3B-220ENST00000495571 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
VWA3B-220ENST00000495571 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
VWA3B-220ENST00000495571 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
VWA3B-220ENST00000495571 WIZO95785 1651 aa12.54□□□□□ -0.4
VWA3B-220ENST00000495571 TOP2AP11388 1531 aaKnown RBP12.54□□□□□ -0.4
VWA3B-220ENST00000495571 FKBP8Q14318 412 aa12.51□□□□□ -0.41
VWA3B-220ENST00000495571 DEKP35659 375 aaKnown RBP12.45□□□□□ -0.42
VWA3B-220ENST00000495571 CLSPNQ9HAW4 1339 aa12.44□□□□□ -0.42
VWA3B-220ENST00000495571 HNRNPUL2Q1KMD3 747 aaKnown RBP12.44□□□□□ -0.42
VWA3B-220ENST00000495571 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
VWA3B-220ENST00000495571 LAMC3Q9Y6N6 1575 aa12.37□□□□□ -0.43
VWA3B-220ENST00000495571 PRDM2Q13029 1718 aa12.36□□□□□ -0.43
VWA3B-220ENST00000495571 RTN4Q9NQC3 1192 aaKnown RBP12.35□□□□□ -0.43
VWA3B-220ENST00000495571 IL27Q8NEV9 243 aa12.31□□□□□ -0.44
VWA3B-220ENST00000495571 NBR1Q14596 966 aa12.29□□□□□ -0.44
VWA3B-220ENST00000495571 CCDC88BA6NC98 1476 aa12.28□□□□□ -0.44
VWA3B-220ENST00000495571 CFTRP13569 1480 aa12.25□□□□□ -0.45
VWA3B-220ENST00000495571 IRX6P78412 446 aaPredicted RBP12.25□□□□□ -0.45
VWA3B-220ENST00000495571 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
VWA3B-220ENST00000495571 TRIM52Q96A61 297 aa12.24□□□□□ -0.45
VWA3B-220ENST00000495571 FANCIQ9NVI1 1328 aa12.24□□□□□ -0.45
VWA3B-220ENST00000495571 UBE2Q2Q8WVN8 375 aa12.23□□□□□ -0.45
VWA3B-220ENST00000495571 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.46
VWA3B-220ENST00000495571 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
VWA3B-220ENST00000495571 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
VWA3B-220ENST00000495571 CEP162Q5TB80 1403 aa12.19□□□□□ -0.46
VWA3B-220ENST00000495571 NEFLP07196 543 aa12.16□□□□□ -0.46
VWA3B-220ENST00000495571 KIF21AQ7Z4S6 1674 aa12.14□□□□□ -0.47
VWA3B-220ENST00000495571 NESP48681 1621 aa12.13□□□□□ -0.47
VWA3B-220ENST00000495571 THOC2Q8NI27 1593 aaKnown RBP12.11□□□□□ -0.47
VWA3B-220ENST00000495571 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
VWA3B-220ENST00000495571 DDX10Q13206 875 aaKnown RBP12.1□□□□□ -0.47
VWA3B-220ENST00000495571 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
VWA3B-220ENST00000495571 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms