RNA–Protein interactions for RNA: ENST00000493930.1

CFAP47-206, Transcript of cilia and flagella associated protein 47, humanhuman

TSL 1 (best)

Gene CFAP47, Length 3,468 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP47-206ENST00000493930 IGF1RP08069 1367 aa11.8□□□□□ -0.52
CFAP47-206ENST00000493930 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
CFAP47-206ENST00000493930 PHLDB1Q86UU1 1377 aa11.8□□□□□ -0.52
CFAP47-206ENST00000493930 NCAPD3P42695 1498 aa11.78□□□□□ -0.52
CFAP47-206ENST00000493930 PPP1R15AO75807 674 aaPredicted RBP11.77□□□□□ -0.53
CFAP47-206ENST00000493930 CFTRP13569 1480 aa11.77□□□□□ -0.53
CFAP47-206ENST00000493930 TRIM52Q96A61 297 aa11.76□□□□□ -0.53
CFAP47-206ENST00000493930 TIAM1Q13009 1591 aa11.76□□□□□ -0.53
CFAP47-206ENST00000493930 ANP32EQ9BTT0 268 aa11.76□□□□□ -0.53
CFAP47-206ENST00000493930 LRRC9Q6ZRR7 1453 aa11.75□□□□□ -0.53
CFAP47-206ENST00000493930 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
CFAP47-206ENST00000493930 HMGXB3Q12766 1538 aa11.73□□□□□ -0.53
CFAP47-206ENST00000493930 MAP3K1Q13233 1512 aa11.7□□□□□ -0.54
CFAP47-206ENST00000493930 ANP32CO43423 234 aa11.68□□□□□ -0.54
CFAP47-206ENST00000493930 RBM19Q9Y4C8 960 aaKnown RBP11.67□□□□□ -0.54
CFAP47-206ENST00000493930 FGD5Q6ZNL6 1462 aa11.66□□□□□ -0.54
CFAP47-206ENST00000493930 NEFLP07196 543 aa11.66□□□□□ -0.54
CFAP47-206ENST00000493930 FHOD3Q2V2M9 1422 aa11.66□□□□□ -0.54
CFAP47-206ENST00000493930 TIMELESSQ9UNS1 1208 aa11.66□□□□□ -0.54
CFAP47-206ENST00000493930 CCER2I3L3R5 266 aa11.65□□□□□ -0.54
CFAP47-206ENST00000493930 PCF11O94913 1555 aaKnown RBP11.65□□□□□ -0.54
CFAP47-206ENST00000493930 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.54
CFAP47-206ENST00000493930 CADPSQ9ULU8 1353 aa11.62□□□□□ -0.55
CFAP47-206ENST00000493930 TONSLQ96HA7 1378 aa11.61□□□□□ -0.55
CFAP47-206ENST00000493930 IRX6P78412 446 aaPredicted RBP11.6□□□□□ -0.55
CFAP47-206ENST00000493930 CFAP43Q8NDM7 1665 aa11.6□□□□□ -0.55
CFAP47-206ENST00000493930 PTPRKQ15262 1439 aa11.59□□□□□ -0.55
CFAP47-206ENST00000493930 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
CFAP47-206ENST00000493930 HNRNPUQ00839 825 aaKnown RBP eCLIP11.57□□□□□ -0.56
CFAP47-206ENST00000493930 FGD6Q6ZV73 1430 aa11.56□□□□□ -0.56
CFAP47-206ENST00000493930 CASKIN1Q8WXD9 1431 aa11.56□□□□□ -0.56
CFAP47-206ENST00000493930 PRDM2Q13029 1718 aa11.56□□□□□ -0.56
CFAP47-206ENST00000493930 MSH5O43196 834 aa11.56□□□□□ -0.56
CFAP47-206ENST00000493930 CCDC18Q5T9S5 1454 aa11.56□□□□□ -0.56
CFAP47-206ENST00000493930 FYCO1Q9BQS8 1478 aa11.55□□□□□ -0.56
CFAP47-206ENST00000493930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.55□□□□□ -0.56
CFAP47-206ENST00000493930 AQRO60306 1485 aaKnown RBP eCLIP11.54□□□□□ -0.56
CFAP47-206ENST00000493930 MTUS2Q5JR59 1369 aa11.53□□□□□ -0.56
CFAP47-206ENST00000493930 BCL11AQ9H165 835 aa11.53□□□□□ -0.56
CFAP47-206ENST00000493930 UACAQ9BZF9 1416 aa11.53□□□□□ -0.56
CFAP47-206ENST00000493930 CCDC184Q52MB2 194 aa11.52□□□□□ -0.57
CFAP47-206ENST00000493930 CHIC2Q9UKJ5 165 aa11.52□□□□□ -0.57
CFAP47-206ENST00000493930 HFM1A2PYH4 1435 aa11.52□□□□□ -0.57
CFAP47-206ENST00000493930 RRP7BPQ9NSQ0 103 aa11.51□□□□□ -0.57
CFAP47-206ENST00000493930 WASHC2AQ641Q2 1341 aa11.51□□□□□ -0.57
CFAP47-206ENST00000493930 FANCD2Q9BXW9 1451 aa11.51□□□□□ -0.57
CFAP47-206ENST00000493930 NAIPQ13075 1403 aa11.51□□□□□ -0.57
CFAP47-206ENST00000493930 HSPA5P11021 654 aaKnown RBP11.51□□□□□ -0.57
CFAP47-206ENST00000493930 PTPN23Q9H3S7 1636 aa11.49□□□□□ -0.57
CFAP47-206ENST00000493930 KDM5BQ9UGL1 1544 aa11.49□□□□□ -0.57
CFAP47-206ENST00000493930 POLA1P09884 1462 aaPredicted RBP11.48□□□□□ -0.57
CFAP47-206ENST00000493930 SNAPC4Q5SXM2 1469 aa11.48□□□□□ -0.57
CFAP47-206ENST00000493930 FMN1Q68DA7 1419 aa11.48□□□□□ -0.57
CFAP47-206ENST00000493930 EFCAB5A4FU69 1503 aa11.48□□□□□ -0.57
CFAP47-206ENST00000493930 ABCA10Q8WWZ4 1543 aa11.47□□□□□ -0.57
CFAP47-206ENST00000493930 NCOA2Q15596 1464 aa11.47□□□□□ -0.57
CFAP47-206ENST00000493930 C11orf95C9JLR9 678 aaPredicted RBP11.46□□□□□ -0.57
CFAP47-206ENST00000493930 FOXD1Q16676 465 aa11.46□□□□□ -0.57
CFAP47-206ENST00000493930 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.58
CFAP47-206ENST00000493930 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
CFAP47-206ENST00000493930 MYOM3Q5VTT5 1437 aa11.45□□□□□ -0.58
CFAP47-206ENST00000493930 NESP48681 1621 aa11.45□□□□□ -0.58
CFAP47-206ENST00000493930 LRRIQ1Q96JM4 1722 aa11.44□□□□□ -0.58
CFAP47-206ENST00000493930 FAM9BQ8IZU0 186 aa11.44□□□□□ -0.58
CFAP47-206ENST00000493930 TDRD9Q8NDG6 1382 aaKnown RBP11.44□□□□□ -0.58
CFAP47-206ENST00000493930 DNMBPQ6XZF7 1577 aa11.43□□□□□ -0.58
CFAP47-206ENST00000493930 CTTNBP2Q8WZ74 1663 aa11.43□□□□□ -0.58
CFAP47-206ENST00000493930 DENND4BO75064 1496 aaPredicted RBP11.43□□□□□ -0.58
CFAP47-206ENST00000493930 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.58
CFAP47-206ENST00000493930 L3MBTL2Q969R5 705 aa11.43□□□□□ -0.58
CFAP47-206ENST00000493930 ARID3CA6NKF2 412 aa11.42□□□□□ -0.58
CFAP47-206ENST00000493930 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
CFAP47-206ENST00000493930 CC2D2AQ9P2K1 1620 aa11.41□□□□□ -0.58
CFAP47-206ENST00000493930 B4GALNT3Q6L9W6 998 aa11.4□□□□□ -0.58
CFAP47-206ENST00000493930 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.58
CFAP47-206ENST00000493930 GRIN2BQ13224 1484 aa11.4□□□□□ -0.58
CFAP47-206ENST00000493930 CUL7Q14999 1698 aa11.4□□□□□ -0.58
CFAP47-206ENST00000493930 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
CFAP47-206ENST00000493930 MAGI3Q5TCQ9 1506 aa11.39□□□□□ -0.59
CFAP47-206ENST00000493930 KDM6BO15054 1643 aa11.39□□□□□ -0.59
CFAP47-206ENST00000493930 PPP4R2Q9NY27 417 aa11.39□□□□□ -0.59
CFAP47-206ENST00000493930 MRS2Q9HD23 443 aa11.39□□□□□ -0.59
CFAP47-206ENST00000493930 CNGB1Q14028 1251 aaPredicted RBP11.38□□□□□ -0.59
CFAP47-206ENST00000493930 NBPF8Q3BBV2 869 aa11.38□□□□□ -0.59
CFAP47-206ENST00000493930 CNTLNQ9NXG0 1405 aa11.38□□□□□ -0.59
CFAP47-206ENST00000493930 SUPT6HQ7KZ85 1726 aaKnown RBP11.37□□□□□ -0.59
CFAP47-206ENST00000493930 SAMD9Q5K651 1589 aa11.37□□□□□ -0.59
CFAP47-206ENST00000493930 ERICH6Q7L0X2 663 aa11.36□□□□□ -0.59
CFAP47-206ENST00000493930 UGGT2Q9NYU1 1516 aa11.36□□□□□ -0.59
CFAP47-206ENST00000493930 CCDC7Q96M83 1385 aa11.36□□□□□ -0.59
CFAP47-206ENST00000493930 SENP3-EIF4A1A0A087X0R7 540 aa11.35□□□□□ -0.59
CFAP47-206ENST00000493930 EHBP1L1Q8N3D4 1523 aa11.35□□□□□ -0.59
CFAP47-206ENST00000493930 URB2Q14146 1524 aaKnown RBP11.34□□□□□ -0.59
CFAP47-206ENST00000493930 NCOA1Q15788 1441 aa11.34□□□□□ -0.59
CFAP47-206ENST00000493930 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
CFAP47-206ENST00000493930 ARHGEF11O15085 1522 aa11.33□□□□□ -0.59
CFAP47-206ENST00000493930 ERICH6BQ5W0A0 696 aa11.33□□□□□ -0.6
CFAP47-206ENST00000493930 KIF7Q2M1P5 1343 aa11.32□□□□□ -0.6
CFAP47-206ENST00000493930 ZBED9Q6R2W3 1325 aa11.32□□□□□ -0.6
CFAP47-206ENST00000493930 TCOF1Q13428 1488 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms