RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 TIAM1Q13009 1591 aa20.28■□□□□ 0.84
ZIC4-215ENST00000493664 SIN3AQ96ST3 1273 aa20.27■□□□□ 0.83
ZIC4-215ENST00000493664 PHLDB1Q86UU1 1377 aa20.26■□□□□ 0.83
ZIC4-215ENST00000493664 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
ZIC4-215ENST00000493664 LRRC9Q6ZRR7 1453 aa20.23■□□□□ 0.83
ZIC4-215ENST00000493664 SETD5Q9C0A6 1442 aa20.22■□□□□ 0.83
ZIC4-215ENST00000493664 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
ZIC4-215ENST00000493664 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
ZIC4-215ENST00000493664 DDX10Q13206 875 aaKnown RBP20.19■□□□□ 0.82
ZIC4-215ENST00000493664 HIRIP3Q9BW71 556 aaPredicted RBP20.17■□□□□ 0.82
ZIC4-215ENST00000493664 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
ZIC4-215ENST00000493664 MAP3K1Q13233 1512 aa20.16■□□□□ 0.82
ZIC4-215ENST00000493664 PRKCSHP14314 528 aaPredicted RBP20.15■□□□□ 0.82
ZIC4-215ENST00000493664 PCF11O94913 1555 aaKnown RBP20.13■□□□□ 0.81
ZIC4-215ENST00000493664 FHOD3Q2V2M9 1422 aa20.13■□□□□ 0.81
ZIC4-215ENST00000493664 FHAD1B1AJZ9 1412 aa20.11■□□□□ 0.81
ZIC4-215ENST00000493664 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
ZIC4-215ENST00000493664 BCANQ96GW7 911 aa20.07■□□□□ 0.8
ZIC4-215ENST00000493664 CFAP43Q8NDM7 1665 aa20.06■□□□□ 0.8
ZIC4-215ENST00000493664 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
ZIC4-215ENST00000493664 TSHZ2Q9NRE2 1034 aa20.03■□□□□ 0.8
ZIC4-215ENST00000493664 BCL11AQ9H165 835 aa20.02■□□□□ 0.8
ZIC4-215ENST00000493664 PPP1R15AO75807 674 aaPredicted RBP20.01■□□□□ 0.79
ZIC4-215ENST00000493664 NESP48681 1621 aa20■□□□□ 0.79
ZIC4-215ENST00000493664 FKBP8Q14318 412 aa19.97■□□□□ 0.79
ZIC4-215ENST00000493664 FYCO1Q9BQS8 1478 aa19.96■□□□□ 0.79
ZIC4-215ENST00000493664 POLA1P09884 1462 aaPredicted RBP19.96■□□□□ 0.79
ZIC4-215ENST00000493664 TRIM52Q96A61 297 aa19.95■□□□□ 0.78
ZIC4-215ENST00000493664 CASKIN1Q8WXD9 1431 aa19.95■□□□□ 0.78
ZIC4-215ENST00000493664 TIMELESSQ9UNS1 1208 aa19.92■□□□□ 0.78
ZIC4-215ENST00000493664 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
ZIC4-215ENST00000493664 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
ZIC4-215ENST00000493664 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
ZIC4-215ENST00000493664 FGD6Q6ZV73 1430 aa19.91■□□□□ 0.78
ZIC4-215ENST00000493664 MTUS2Q5JR59 1369 aa19.89■□□□□ 0.78
ZIC4-215ENST00000493664 PTPRKQ15262 1439 aa19.89■□□□□ 0.78
ZIC4-215ENST00000493664 EFCAB5A4FU69 1503 aa19.89■□□□□ 0.78
ZIC4-215ENST00000493664 ANP32CO43423 234 aa19.89■□□□□ 0.77
ZIC4-215ENST00000493664 TONSLQ96HA7 1378 aa19.89■□□□□ 0.77
ZIC4-215ENST00000493664 CCDC18Q5T9S5 1454 aa19.87■□□□□ 0.77
ZIC4-215ENST00000493664 CTTNBP2Q8WZ74 1663 aa19.87■□□□□ 0.77
ZIC4-215ENST00000493664 LAMC3Q9Y6N6 1575 aa19.86■□□□□ 0.77
ZIC4-215ENST00000493664 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.86■□□□□ 0.77
ZIC4-215ENST00000493664 AQRO60306 1485 aaKnown RBP eCLIP19.86■□□□□ 0.77
ZIC4-215ENST00000493664 FMN1Q68DA7 1419 aa19.85■□□□□ 0.77
ZIC4-215ENST00000493664 SNAPC4Q5SXM2 1469 aa19.84■□□□□ 0.77
ZIC4-215ENST00000493664 TDRD9Q8NDG6 1382 aaKnown RBP19.84■□□□□ 0.77
ZIC4-215ENST00000493664 CUL7Q14999 1698 aa19.82■□□□□ 0.76
ZIC4-215ENST00000493664 CCER2I3L3R5 266 aa19.81■□□□□ 0.76
ZIC4-215ENST00000493664 LRRIQ1Q96JM4 1722 aa19.8■□□□□ 0.76
ZIC4-215ENST00000493664 HFM1A2PYH4 1435 aa19.79■□□□□ 0.76
ZIC4-215ENST00000493664 UACAQ9BZF9 1416 aa19.79■□□□□ 0.76
ZIC4-215ENST00000493664 NEFLP07196 543 aa19.78■□□□□ 0.76
ZIC4-215ENST00000493664 PTPN23Q9H3S7 1636 aa19.78■□□□□ 0.76
ZIC4-215ENST00000493664 NCOA2Q15596 1464 aa19.78■□□□□ 0.76
ZIC4-215ENST00000493664 CHIC2Q9UKJ5 165 aa19.77■□□□□ 0.76
ZIC4-215ENST00000493664 NAIPQ13075 1403 aa19.77■□□□□ 0.75
ZIC4-215ENST00000493664 RRP7BPQ9NSQ0 103 aa19.77■□□□□ 0.75
ZIC4-215ENST00000493664 ERICH6Q7L0X2 663 aa19.76■□□□□ 0.75
ZIC4-215ENST00000493664 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
ZIC4-215ENST00000493664 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
ZIC4-215ENST00000493664 MYOM3Q5VTT5 1437 aa19.74■□□□□ 0.75
ZIC4-215ENST00000493664 GRIN2BQ13224 1484 aa19.7■□□□□ 0.74
ZIC4-215ENST00000493664 SAMD9Q5K651 1589 aa19.7■□□□□ 0.74
ZIC4-215ENST00000493664 ARID3CA6NKF2 412 aa19.7■□□□□ 0.74
ZIC4-215ENST00000493664 GAPVD1Q14C86 1478 aa19.69■□□□□ 0.74
ZIC4-215ENST00000493664 KIF21AQ7Z4S6 1674 aa19.68■□□□□ 0.74
ZIC4-215ENST00000493664 ANP32EQ9BTT0 268 aa19.68■□□□□ 0.74
ZIC4-215ENST00000493664 SUPT6HQ7KZ85 1726 aaKnown RBP19.67■□□□□ 0.74
ZIC4-215ENST00000493664 KDM5BQ9UGL1 1544 aa19.67■□□□□ 0.74
ZIC4-215ENST00000493664 MAGI3Q5TCQ9 1506 aa19.66■□□□□ 0.74
ZIC4-215ENST00000493664 HNRNPUQ00839 825 aaKnown RBP eCLIP19.66■□□□□ 0.74
ZIC4-215ENST00000493664 ABCA5Q8WWZ7 1642 aa19.65■□□□□ 0.74
ZIC4-215ENST00000493664 HSPA5P11021 654 aaKnown RBP19.64■□□□□ 0.73
ZIC4-215ENST00000493664 IRX6P78412 446 aaPredicted RBP19.64■□□□□ 0.73
ZIC4-215ENST00000493664 WASHC2AQ641Q2 1341 aa19.63■□□□□ 0.73
ZIC4-215ENST00000493664 FOXD1Q16676 465 aa19.63■□□□□ 0.73
ZIC4-215ENST00000493664 RBM19Q9Y4C8 960 aaKnown RBP19.63■□□□□ 0.73
ZIC4-215ENST00000493664 EHBP1L1Q8N3D4 1523 aa19.63■□□□□ 0.73
ZIC4-215ENST00000493664 UGGT2Q9NYU1 1516 aa19.61■□□□□ 0.73
ZIC4-215ENST00000493664 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
ZIC4-215ENST00000493664 DENND4BO75064 1496 aaPredicted RBP19.6■□□□□ 0.73
ZIC4-215ENST00000493664 KDM6BO15054 1643 aa19.59■□□□□ 0.73
ZIC4-215ENST00000493664 CCDC184Q52MB2 194 aa19.57■□□□□ 0.72
ZIC4-215ENST00000493664 THOC2Q8NI27 1593 aaKnown RBP19.56■□□□□ 0.72
ZIC4-215ENST00000493664 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
ZIC4-215ENST00000493664 L3MBTL2Q969R5 705 aa19.55■□□□□ 0.72
ZIC4-215ENST00000493664 MPHOSPH9Q99550 1183 aa19.55■□□□□ 0.72
ZIC4-215ENST00000493664 EIF4G2P78344 907 aaKnown RBP eCLIP19.54■□□□□ 0.72
ZIC4-215ENST00000493664 CDK13Q14004 1512 aaKnown RBP19.54■□□□□ 0.72
ZIC4-215ENST00000493664 C11orf95C9JLR9 678 aaPredicted RBP19.53■□□□□ 0.72
ZIC4-215ENST00000493664 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
ZIC4-215ENST00000493664 EPRSP07814 1512 aaKnown RBP19.5■□□□□ 0.71
ZIC4-215ENST00000493664 GCC2Q8IWJ2 1684 aa19.5■□□□□ 0.71
ZIC4-215ENST00000493664 TCOF1Q13428 1488 aaKnown RBP19.5■□□□□ 0.71
ZIC4-215ENST00000493664 HECW1Q76N89 1606 aa19.49■□□□□ 0.71
ZIC4-215ENST00000493664 FAM9BQ8IZU0 186 aa19.47■□□□□ 0.71
ZIC4-215ENST00000493664 TARBP1Q13395 1621 aaKnown RBP19.46■□□□□ 0.71
ZIC4-215ENST00000493664 NBPF8Q3BBV2 869 aa19.45■□□□□ 0.7
ZIC4-215ENST00000493664 ZNF644Q9H582 1327 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms