RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
CAB39-206ENST00000493540 CUX1P39880 1505 aa13.25□□□□□ -0.29
CAB39-206ENST00000493540 ARAP1Q96P48 1450 aa13.24□□□□□ -0.29
CAB39-206ENST00000493540 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
CAB39-206ENST00000493540 ABCA5Q8WWZ7 1642 aa13.24□□□□□ -0.29
CAB39-206ENST00000493540 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
CAB39-206ENST00000493540 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.299e-10■■□□□ 13
CAB39-206ENST00000493540 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
CAB39-206ENST00000493540 MAGI1Q96QZ7 1491 aaPredicted RBP13.2□□□□□ -0.3
CAB39-206ENST00000493540 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
CAB39-206ENST00000493540 SYNJ1O43426 1573 aa13.17□□□□□ -0.3
CAB39-206ENST00000493540 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
CAB39-206ENST00000493540 BIVM-ERCC5R4GMW8 1640 aa13.16□□□□□ -0.3
CAB39-206ENST00000493540 ABCA10Q8WWZ4 1543 aa13.13□□□□□ -0.31
CAB39-206ENST00000493540 SOGA1O94964 1423 aa13.13□□□□□ -0.31
CAB39-206ENST00000493540 SYNJ2O15056 1496 aa13.12□□□□□ -0.31
CAB39-206ENST00000493540 APLP2Q06481 763 aa13.12□□□□□ -0.31
CAB39-206ENST00000493540 GRIN2BQ13224 1484 aa13.11□□□□□ -0.31
CAB39-206ENST00000493540 ADAMTS12P58397 1594 aa13.1□□□□□ -0.31
CAB39-206ENST00000493540 SHROOM2Q13796 1616 aa13.1□□□□□ -0.31
CAB39-206ENST00000493540 TOP2BQ02880 1626 aa13.09□□□□□ -0.31
CAB39-206ENST00000493540 POTEHQ6S545 545 aa13.08□□□□□ -0.32
CAB39-206ENST00000493540 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
CAB39-206ENST00000493540 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
CAB39-206ENST00000493540 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
CAB39-206ENST00000493540 CEP170Q5SW79 1584 aa13.03□□□□□ -0.32
CAB39-206ENST00000493540 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
CAB39-206ENST00000493540 GRIN2AQ12879 1464 aa12.99□□□□□ -0.33
CAB39-206ENST00000493540 NUP160Q12769 1436 aa12.99□□□□□ -0.33
CAB39-206ENST00000493540 ERCC6L2Q5T890 1561 aa12.98□□□□□ -0.33
CAB39-206ENST00000493540 ERICH3Q5RHP9 1530 aa12.98□□□□□ -0.33
CAB39-206ENST00000493540 CYB5RLQ6IPT4 315 aa12.95□□□□□ -0.34
CAB39-206ENST00000493540 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
CAB39-206ENST00000493540 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
CAB39-206ENST00000493540 WRNQ14191 1432 aaPredicted RBP eCLIP12.91□□□□□ -0.34
CAB39-206ENST00000493540 CAPN15O75808 1086 aa12.9□□□□□ -0.34
CAB39-206ENST00000493540 FBLN2P98095 1184 aa12.88□□□□□ -0.35
CAB39-206ENST00000493540 ZNF219Q9P2Y4 722 aaPredicted RBP12.88□□□□□ -0.35
CAB39-206ENST00000493540 FHAD1B1AJZ9 1412 aa12.88□□□□□ -0.35
CAB39-206ENST00000493540 TRHP20396 242 aaPredicted RBP12.87□□□□□ -0.35
CAB39-206ENST00000493540 CHMP7Q8WUX9 453 aaPredicted RBP12.87□□□□□ -0.35
CAB39-206ENST00000493540 CUL7Q14999 1698 aa12.84□□□□□ -0.35
CAB39-206ENST00000493540 DSG3P32926 999 aa12.83□□□□□ -0.36
CAB39-206ENST00000493540 MAPKBP1O60336 1514 aa12.8□□□□□ -0.36
CAB39-206ENST00000493540 ADCY10Q96PN6 1610 aa12.8□□□□□ -0.36
CAB39-206ENST00000493540 DIP2BQ9P265 1576 aa12.77□□□□□ -0.36
CAB39-206ENST00000493540 PRG4Q92954 1404 aaPredicted RBP12.71□□□□□ -0.37
CAB39-206ENST00000493540 POLA2Q14181 598 aa12.71□□□□□ -0.37
CAB39-206ENST00000493540 PPRC1Q5VV67 1664 aaKnown RBP12.7□□□□□ -0.38
CAB39-206ENST00000493540 KIAA0586Q9BVV6 1533 aa12.69□□□□□ -0.38
CAB39-206ENST00000493540 ABCC10Q5T3U5 1492 aa12.69□□□□□ -0.38
CAB39-206ENST00000493540 TSPOAP1O95153 1857 aa12.65□□□□□ -0.38
CAB39-206ENST00000493540 SUPT5HO00267 1087 aaKnown RBP12.64□□□□□ -0.39
CAB39-206ENST00000493540 ABCB7O75027 752 aa12.64□□□□□ -0.39
CAB39-206ENST00000493540 IQGAP2Q13576 1575 aa12.63□□□□□ -0.39
CAB39-206ENST00000493540 CTTNBP2Q8WZ74 1663 aa12.62□□□□□ -0.39
CAB39-206ENST00000493540 IGF1RP08069 1367 aa12.62□□□□□ -0.39
CAB39-206ENST00000493540 KIF27Q86VH2 1401 aa12.61□□□□□ -0.39
CAB39-206ENST00000493540 GLI2P10070 1586 aa12.6□□□□□ -0.39
CAB39-206ENST00000493540 KDM6BO15054 1643 aa12.6□□□□□ -0.39
CAB39-206ENST00000493540 JPH4Q96JJ6 628 aa12.59□□□□□ -0.39
CAB39-206ENST00000493540 MAP3K4Q9Y6R4 1608 aa12.59□□□□□ -0.39
CAB39-206ENST00000493540 UHRF1BP1LA0JNW5 1464 aa12.57□□□□□ -0.4
CAB39-206ENST00000493540 ABCC2Q92887 1545 aa12.56□□□□□ -0.4
CAB39-206ENST00000493540 DISP1Q96F81 1524 aa12.56□□□□□ -0.4
CAB39-206ENST00000493540 UGGT2Q9NYU1 1516 aa12.56□□□□□ -0.4
CAB39-206ENST00000493540 KIAA0556O60303 1618 aa12.55□□□□□ -0.4
CAB39-206ENST00000493540 ZCCHC11Q5TAX3 1644 aaKnown RBP12.54□□□□□ -0.4
CAB39-206ENST00000493540 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
CAB39-206ENST00000493540 KDM5BQ9UGL1 1544 aa12.51□□□□□ -0.41
CAB39-206ENST00000493540 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
CAB39-206ENST00000493540 CARMIL1Q5VZK9 1371 aa12.48□□□□□ -0.41
CAB39-206ENST00000493540 TNIKQ9UKE5 1360 aa12.47□□□□□ -0.41
CAB39-206ENST00000493540 CFAP43Q8NDM7 1665 aa12.47□□□□□ -0.41
CAB39-206ENST00000493540 PLB1Q6P1J6 1458 aa12.46□□□□□ -0.41
CAB39-206ENST00000493540 FKBP8Q14318 412 aa12.46□□□□□ -0.41
CAB39-206ENST00000493540 CARMIL2Q6F5E8 1435 aa12.45□□□□□ -0.42
CAB39-206ENST00000493540 RAPGEF2Q9Y4G8 1499 aa12.45□□□□□ -0.42
CAB39-206ENST00000493540 PTPRGP23470 1445 aa12.45□□□□□ -0.42
CAB39-206ENST00000493540 ASXL2Q76L83 1435 aa12.45□□□□□ -0.42
CAB39-206ENST00000493540 EPRSP07814 1512 aaKnown RBP12.44□□□□□ -0.42
CAB39-206ENST00000493540 ABCA8O94911 1581 aa12.43□□□□□ -0.42
CAB39-206ENST00000493540 UACAQ9BZF9 1416 aa12.43□□□□□ -0.42
CAB39-206ENST00000493540 FAM69CQ0P6D2 419 aa12.42□□□□□ -0.42
CAB39-206ENST00000493540 COL17A1Q9UMD9 1497 aaPredicted RBP12.39□□□□□ -0.43
CAB39-206ENST00000493540 PRXQ9BXM0 1461 aa12.38□□□□□ -0.43
CAB39-206ENST00000493540 SAMD9Q5K651 1589 aa12.38□□□□□ -0.43
CAB39-206ENST00000493540 WDR7Q9Y4E6 1490 aa12.37□□□□□ -0.43
CAB39-206ENST00000493540 TEX14Q8IWB6 1497 aa12.36□□□□□ -0.43
CAB39-206ENST00000493540 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
CAB39-206ENST00000493540 ABCA9Q8IUA7 1624 aa12.34□□□□□ -0.43
CAB39-206ENST00000493540 MAGI3Q5TCQ9 1506 aa12.34□□□□□ -0.43
CAB39-206ENST00000493540 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
CAB39-206ENST00000493540 ADGRL1O94910 1474 aa12.34□□□□□ -0.43
CAB39-206ENST00000493540 GOLGA3Q08378 1498 aa12.33□□□□□ -0.44
CAB39-206ENST00000493540 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
CAB39-206ENST00000493540 KIF21BO75037 1637 aa12.29□□□□□ -0.44
CAB39-206ENST00000493540 RBM42Q9BTD8 480 aaKnown RBP12.28□□□□□ -0.44
CAB39-206ENST00000493540 FRMPD1Q5SYB0 1578 aa12.27□□□□□ -0.44
CAB39-206ENST00000493540 RAPGEF6Q8TEU7 1601 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms