RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
SPTA1-208ENST00000492934 ATXN8OSP0DMR3 200 aa13.69□□□□□ -0.22
SPTA1-208ENST00000492934 FANCD2Q9BXW9 1451 aa13.68□□□□□ -0.22
SPTA1-208ENST00000492934 RSF1Q96T23 1441 aaPredicted RBP13.68□□□□□ -0.22
SPTA1-208ENST00000492934 CFTRP13569 1480 aa13.66□□□□□ -0.22
SPTA1-208ENST00000492934 FBLN2P98095 1184 aa13.65□□□□□ -0.22
SPTA1-208ENST00000492934 PRKAR2AP13861 404 aaKnown RBP13.62□□□□□ -0.23
SPTA1-208ENST00000492934 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
SPTA1-208ENST00000492934 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
SPTA1-208ENST00000492934 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
SPTA1-208ENST00000492934 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
SPTA1-208ENST00000492934 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
SPTA1-208ENST00000492934 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
SPTA1-208ENST00000492934 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
SPTA1-208ENST00000492934 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
SPTA1-208ENST00000492934 ZNF692Q9BU19 519 aaPredicted RBP13.47□□□□□ -0.25
SPTA1-208ENST00000492934 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
SPTA1-208ENST00000492934 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
SPTA1-208ENST00000492934 GABBR2O75899 941 aa13.45□□□□□ -0.26
SPTA1-208ENST00000492934 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
SPTA1-208ENST00000492934 IFT140Q96RY7 1462 aa13.43□□□□□ -0.26
SPTA1-208ENST00000492934 TOPBP1Q92547 1522 aa13.42□□□□□ -0.26
SPTA1-208ENST00000492934 ZNF608Q9ULD9 1512 aaPredicted RBP13.41□□□□□ -0.26
SPTA1-208ENST00000492934 LHX8Q68G74 356 aa13.39□□□□□ -0.27
SPTA1-208ENST00000492934 EIF4G3O43432 1585 aaKnown RBP13.39□□□□□ -0.27
SPTA1-208ENST00000492934 DNMBPQ6XZF7 1577 aa13.39□□□□□ -0.27
SPTA1-208ENST00000492934 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
SPTA1-208ENST00000492934 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
SPTA1-208ENST00000492934 RIMBP3CA6NJZ7 1639 aa13.34□□□□□ -0.27
SPTA1-208ENST00000492934 RIMBP3BA6NNM3 1639 aa13.34□□□□□ -0.27
SPTA1-208ENST00000492934 RIMBP3Q9UFD9 1639 aa13.34□□□□□ -0.27
SPTA1-208ENST00000492934 TARBP1Q13395 1621 aaKnown RBP13.31□□□□□ -0.28
SPTA1-208ENST00000492934 PRR29P0C7W0 189 aa13.3□□□□□ -0.28
SPTA1-208ENST00000492934 ARHGEF11O15085 1522 aa13.29□□□□□ -0.28
SPTA1-208ENST00000492934 POLA1P09884 1462 aaPredicted RBP13.29□□□□□ -0.28
SPTA1-208ENST00000492934 CHD1O14646 1710 aa13.27□□□□□ -0.28
SPTA1-208ENST00000492934 AQRO60306 1485 aaKnown RBP eCLIP13.26□□□□□ -0.292e-6■■■□□ 16
SPTA1-208ENST00000492934 RAD54L2Q9Y4B4 1467 aa13.22□□□□□ -0.29
SPTA1-208ENST00000492934 FGD5Q6ZNL6 1462 aa13.2□□□□□ -0.3
SPTA1-208ENST00000492934 WDR97A6NE52 1622 aa13.19□□□□□ -0.3
SPTA1-208ENST00000492934 SNAPC4Q5SXM2 1469 aa13.18□□□□□ -0.3
SPTA1-208ENST00000492934 SOGA1O94964 1423 aa13.18□□□□□ -0.3
SPTA1-208ENST00000492934 CUX1P39880 1505 aa13.18□□□□□ -0.3
SPTA1-208ENST00000492934 TDRD9Q8NDG6 1382 aaKnown RBP13.17□□□□□ -0.3
SPTA1-208ENST00000492934 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
SPTA1-208ENST00000492934 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
SPTA1-208ENST00000492934 CLCN6P51797 869 aa13.15□□□□□ -0.3
SPTA1-208ENST00000492934 POTEIP0CG38 1075 aa13.14□□□□□ -0.31
SPTA1-208ENST00000492934 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
SPTA1-208ENST00000492934 MAGI1Q96QZ7 1491 aaPredicted RBP13.12□□□□□ -0.31
SPTA1-208ENST00000492934 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
SPTA1-208ENST00000492934 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
SPTA1-208ENST00000492934 GRIN2BQ13224 1484 aa13.11□□□□□ -0.31
SPTA1-208ENST00000492934 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
SPTA1-208ENST00000492934 PBRM1Q86U86 1689 aa13.09□□□□□ -0.31
SPTA1-208ENST00000492934 SYNJ2O15056 1496 aa13.08□□□□□ -0.32
SPTA1-208ENST00000492934 ABCA5Q8WWZ7 1642 aa13.06□□□□□ -0.32
SPTA1-208ENST00000492934 GAPVD1Q14C86 1478 aa13.05□□□□□ -0.32
SPTA1-208ENST00000492934 CHMP7Q8WUX9 453 aaPredicted RBP13.05□□□□□ -0.32
SPTA1-208ENST00000492934 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
SPTA1-208ENST00000492934 SUPT5HO00267 1087 aaKnown RBP13.01□□□□□ -0.33
SPTA1-208ENST00000492934 DCBLD2Q96PD2 775 aa13.01□□□□□ -0.33
SPTA1-208ENST00000492934 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
SPTA1-208ENST00000492934 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
SPTA1-208ENST00000492934 TOP2BQ02880 1626 aa12.96□□□□□ -0.33
SPTA1-208ENST00000492934 GRIN2AQ12879 1464 aa12.96□□□□□ -0.34
SPTA1-208ENST00000492934 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.34
SPTA1-208ENST00000492934 ZNF579Q8NAF0 562 aaKnown RBP12.95□□□□□ -0.34
SPTA1-208ENST00000492934 CEP170Q5SW79 1584 aa12.92□□□□□ -0.34
SPTA1-208ENST00000492934 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
SPTA1-208ENST00000492934 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.35
SPTA1-208ENST00000492934 NUP160Q12769 1436 aa12.89□□□□□ -0.35
SPTA1-208ENST00000492934 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
SPTA1-208ENST00000492934 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
SPTA1-208ENST00000492934 FHAD1B1AJZ9 1412 aa12.88□□□□□ -0.35
SPTA1-208ENST00000492934 SHROOM2Q13796 1616 aa12.86□□□□□ -0.35
SPTA1-208ENST00000492934 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
SPTA1-208ENST00000492934 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
SPTA1-208ENST00000492934 RUSC2Q8N2Y8 1516 aa12.81□□□□□ -0.36
SPTA1-208ENST00000492934 GALR2O43603 387 aaPredicted RBP12.8□□□□□ -0.36
SPTA1-208ENST00000492934 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
SPTA1-208ENST00000492934 PRG4Q92954 1404 aaPredicted RBP12.76□□□□□ -0.37
SPTA1-208ENST00000492934 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
SPTA1-208ENST00000492934 CUL7Q14999 1698 aa12.71□□□□□ -0.37
SPTA1-208ENST00000492934 POTEB2H3BUK9 544 aa12.7□□□□□ -0.38
SPTA1-208ENST00000492934 KIF27Q86VH2 1401 aa12.69□□□□□ -0.38
SPTA1-208ENST00000492934 KIF13AQ9H1H9 1805 aa12.69□□□□□ -0.38
SPTA1-208ENST00000492934 JPH4Q96JJ6 628 aa12.68□□□□□ -0.38
SPTA1-208ENST00000492934 ADCY10Q96PN6 1610 aa12.66□□□□□ -0.38
SPTA1-208ENST00000492934 KIAA0586Q9BVV6 1533 aa12.66□□□□□ -0.38
SPTA1-208ENST00000492934 PHF12Q96QT6 1004 aa12.65□□□□□ -0.38
SPTA1-208ENST00000492934 MAPKBP1O60336 1514 aa12.65□□□□□ -0.38
SPTA1-208ENST00000492934 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
SPTA1-208ENST00000492934 NPM1P06748 294 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPTA1-208ENST00000492934 IGF1RP08069 1367 aa12.63□□□□□ -0.39
SPTA1-208ENST00000492934 ABCC10Q5T3U5 1492 aa12.63□□□□□ -0.39
SPTA1-208ENST00000492934 POTEMA6NI47 508 aa12.62□□□□□ -0.39
SPTA1-208ENST00000492934 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
SPTA1-208ENST00000492934 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
SPTA1-208ENST00000492934 IQGAP2Q13576 1575 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms