RNA–Protein interactions for RNA: ENST00000491998.5

DFFB-211, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,152 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-211ENST00000491998 CLIP1P30622 1438 aa16.56■□□□□ 0.24
DFFB-211ENST00000491998 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
DFFB-211ENST00000491998 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
DFFB-211ENST00000491998 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
DFFB-211ENST00000491998 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
DFFB-211ENST00000491998 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.24
DFFB-211ENST00000491998 DNMBPQ6XZF7 1577 aa16.52■□□□□ 0.23
DFFB-211ENST00000491998 CUX2O14529 1486 aa16.51■□□□□ 0.23
DFFB-211ENST00000491998 POLA1P09884 1462 aaPredicted RBP16.5■□□□□ 0.23
DFFB-211ENST00000491998 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
DFFB-211ENST00000491998 DHX57Q6P158 1386 aaKnown RBP16.49■□□□□ 0.23
DFFB-211ENST00000491998 CLSPNQ9HAW4 1339 aa16.48■□□□□ 0.23
DFFB-211ENST00000491998 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
DFFB-211ENST00000491998 VPS8Q8N3P4 1428 aa16.48■□□□□ 0.23
DFFB-211ENST00000491998 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.48■□□□□ 0.23
DFFB-211ENST00000491998 KIF21BO75037 1637 aa16.47■□□□□ 0.23
DFFB-211ENST00000491998 ITGAEP38570 1179 aa16.44■□□□□ 0.22
DFFB-211ENST00000491998 FKBP8Q14318 412 aa16.43■□□□□ 0.22
DFFB-211ENST00000491998 PRXQ9BXM0 1461 aa16.43■□□□□ 0.22
DFFB-211ENST00000491998 DEKP35659 375 aaKnown RBP16.41■□□□□ 0.22
DFFB-211ENST00000491998 KANK4Q5T7N3 995 aaPredicted RBP16.41■□□□□ 0.22
DFFB-211ENST00000491998 IGF1RP08069 1367 aa16.41■□□□□ 0.22
DFFB-211ENST00000491998 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
DFFB-211ENST00000491998 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
DFFB-211ENST00000491998 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
DFFB-211ENST00000491998 MRC2Q9UBG0 1479 aa16.34■□□□□ 0.21
DFFB-211ENST00000491998 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.21
DFFB-211ENST00000491998 ERCC6Q03468 1493 aa16.33■□□□□ 0.2
DFFB-211ENST00000491998 P3H3Q8IVL6 736 aa16.32■□□□□ 0.2
DFFB-211ENST00000491998 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
DFFB-211ENST00000491998 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
DFFB-211ENST00000491998 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
DFFB-211ENST00000491998 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
DFFB-211ENST00000491998 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
DFFB-211ENST00000491998 MSH5O43196 834 aa16.29■□□□□ 0.2
DFFB-211ENST00000491998 TRIM52Q96A61 297 aa16.28■□□□□ 0.2
DFFB-211ENST00000491998 TARBP1Q13395 1621 aaKnown RBP16.28■□□□□ 0.2
DFFB-211ENST00000491998 WDR62O43379 1518 aa16.24■□□□□ 0.19
DFFB-211ENST00000491998 AQRO60306 1485 aaKnown RBP eCLIP16.24■□□□□ 0.198e-7■■■■■ 28.7
DFFB-211ENST00000491998 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
DFFB-211ENST00000491998 GAPVD1Q14C86 1478 aa16.24■□□□□ 0.19
DFFB-211ENST00000491998 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
DFFB-211ENST00000491998 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
DFFB-211ENST00000491998 NEFLP07196 543 aa16.22■□□□□ 0.19
DFFB-211ENST00000491998 SIN3AQ96ST3 1273 aa16.22■□□□□ 0.19
DFFB-211ENST00000491998 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
DFFB-211ENST00000491998 AEBP2Q6ZN18 517 aaPredicted RBP16.2■□□□□ 0.18
DFFB-211ENST00000491998 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
DFFB-211ENST00000491998 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
DFFB-211ENST00000491998 CCNB3Q8WWL7 1395 aa16.15■□□□□ 0.18
DFFB-211ENST00000491998 ARHGAP35Q9NRY4 1499 aa16.15■□□□□ 0.18
DFFB-211ENST00000491998 RAB3GAP2Q9H2M9 1393 aa16.15■□□□□ 0.18
DFFB-211ENST00000491998 IL27Q8NEV9 243 aa16.14■□□□□ 0.17
DFFB-211ENST00000491998 CUL7Q14999 1698 aa16.13■□□□□ 0.17
DFFB-211ENST00000491998 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
DFFB-211ENST00000491998 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
DFFB-211ENST00000491998 IRX6P78412 446 aaPredicted RBP16.12■□□□□ 0.17
DFFB-211ENST00000491998 PDE4CQ08493 712 aa16.11■□□□□ 0.17
DFFB-211ENST00000491998 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
DFFB-211ENST00000491998 PPP1R15AO75807 674 aaPredicted RBP16.1■□□□□ 0.17
DFFB-211ENST00000491998 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
DFFB-211ENST00000491998 EIF4G3O43432 1585 aaKnown RBP16.07■□□□□ 0.16
DFFB-211ENST00000491998 MAPKBP1O60336 1514 aa16.07■□□□□ 0.16
DFFB-211ENST00000491998 ANP32CO43423 234 aa16.06■□□□□ 0.16
DFFB-211ENST00000491998 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
DFFB-211ENST00000491998 FAM50AQ14320 339 aaKnown RBP16.06■□□□□ 0.16
DFFB-211ENST00000491998 GRIN2BQ13224 1484 aa16.05■□□□□ 0.16
DFFB-211ENST00000491998 FHOD3Q2V2M9 1422 aa16.04■□□□□ 0.16
DFFB-211ENST00000491998 A0A0U1RQG5 324 aaPredicted RBP16.03■□□□□ 0.16
DFFB-211ENST00000491998 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
DFFB-211ENST00000491998 ADAMTS12P58397 1594 aa16.03■□□□□ 0.16
DFFB-211ENST00000491998 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.16
DFFB-211ENST00000491998 CTTNBP2Q8WZ74 1663 aa16.01■□□□□ 0.15
DFFB-211ENST00000491998 FHAD1B1AJZ9 1412 aa16.01■□□□□ 0.15
DFFB-211ENST00000491998 ARID3CA6NKF2 412 aa16■□□□□ 0.15
DFFB-211ENST00000491998 SETD5Q9C0A6 1442 aa15.98■□□□□ 0.15
DFFB-211ENST00000491998 FGD1P98174 961 aa15.97■□□□□ 0.15
DFFB-211ENST00000491998 CCER2I3L3R5 266 aa15.97■□□□□ 0.15
DFFB-211ENST00000491998 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
DFFB-211ENST00000491998 FANCIQ9NVI1 1328 aa15.96■□□□□ 0.15
DFFB-211ENST00000491998 FBLN2P98095 1184 aa15.96■□□□□ 0.15
DFFB-211ENST00000491998 GLIPR1L2Q4G1C9 344 aa15.95■□□□□ 0.14
DFFB-211ENST00000491998 CDK11AQ9UQ88 783 aaPredicted RBP15.95■□□□□ 0.14
DFFB-211ENST00000491998 VSIG10Q8N0Z9 540 aa15.92■□□□□ 0.14
DFFB-211ENST00000491998 BCL11BQ9C0K0 894 aaPredicted RBP15.92■□□□□ 0.14
DFFB-211ENST00000491998 PHLDB1Q86UU1 1377 aa15.91■□□□□ 0.14
DFFB-211ENST00000491998 GRIN2AQ12879 1464 aa15.9■□□□□ 0.14
DFFB-211ENST00000491998 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
DFFB-211ENST00000491998 PCF11O94913 1555 aaKnown RBP15.89■□□□□ 0.13
DFFB-211ENST00000491998 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
DFFB-211ENST00000491998 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
DFFB-211ENST00000491998 MAGI1Q96QZ7 1491 aaPredicted RBP15.88■□□□□ 0.13
DFFB-211ENST00000491998 EFCAB5A4FU69 1503 aa15.88■□□□□ 0.13
DFFB-211ENST00000491998 AAMPQ13685 434 aa15.87■□□□□ 0.13
DFFB-211ENST00000491998 IQGAP2Q13576 1575 aa15.87■□□□□ 0.13
DFFB-211ENST00000491998 SAMD9Q5K651 1589 aa15.87■□□□□ 0.13
DFFB-211ENST00000491998 SYNJ2O15056 1496 aa15.86■□□□□ 0.13
DFFB-211ENST00000491998 NBR1Q14596 966 aa15.85■□□□□ 0.13
DFFB-211ENST00000491998 RBM10P98175 930 aaKnown RBP15.85■□□□□ 0.13
DFFB-211ENST00000491998 CEP170Q5SW79 1584 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms