RNA–Protein interactions for RNA: ENST00000490927.5

SCRN3-210, Transcript of secernin 3, humanhuman

TSL 3

Gene SCRN3, Length 929 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-210ENST00000490927 CACNB1Q02641 598 aaPredicted RBP17.58■□□□□ 0.4
SCRN3-210ENST00000490927 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
SCRN3-210ENST00000490927 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
SCRN3-210ENST00000490927 APLP2Q06481 763 aa17.54■□□□□ 0.4
SCRN3-210ENST00000490927 CCER1Q8TC90 406 aaPredicted RBP17.52■□□□□ 0.4
SCRN3-210ENST00000490927 CLIP1P30622 1438 aa17.52■□□□□ 0.4
SCRN3-210ENST00000490927 CADPSQ9ULU8 1353 aa17.52■□□□□ 0.39
SCRN3-210ENST00000490927 UBTFP17480 764 aaKnown RBP17.51■□□□□ 0.39
SCRN3-210ENST00000490927 PRDM2Q13029 1718 aa17.48■□□□□ 0.39
SCRN3-210ENST00000490927 RIMBP3CA6NJZ7 1639 aa17.47■□□□□ 0.39
SCRN3-210ENST00000490927 RIMBP3BA6NNM3 1639 aa17.47■□□□□ 0.39
SCRN3-210ENST00000490927 RIMBP3Q9UFD9 1639 aa17.47■□□□□ 0.39
SCRN3-210ENST00000490927 PRXQ9BXM0 1461 aa17.47■□□□□ 0.39
SCRN3-210ENST00000490927 ATXN8OSP0DMR3 200 aa17.44■□□□□ 0.38
SCRN3-210ENST00000490927 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
SCRN3-210ENST00000490927 PELP1Q8IZL8 1130 aaKnown RBP17.41■□□□□ 0.38
SCRN3-210ENST00000490927 CFTRP13569 1480 aa17.41■□□□□ 0.38
SCRN3-210ENST00000490927 RAPGEF2Q9Y4G8 1499 aa17.41■□□□□ 0.38
SCRN3-210ENST00000490927 CAPN15O75808 1086 aa17.37■□□□□ 0.37
SCRN3-210ENST00000490927 CLSPNQ9HAW4 1339 aa17.37■□□□□ 0.37
SCRN3-210ENST00000490927 CUX1P39880 1505 aa17.33■□□□□ 0.37
SCRN3-210ENST00000490927 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
SCRN3-210ENST00000490927 KIF27Q86VH2 1401 aa17.32■□□□□ 0.36
SCRN3-210ENST00000490927 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
SCRN3-210ENST00000490927 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
SCRN3-210ENST00000490927 ZNF219Q9P2Y4 722 aaPredicted RBP17.29■□□□□ 0.36
SCRN3-210ENST00000490927 MAP3K1Q13233 1512 aa17.27■□□□□ 0.36
SCRN3-210ENST00000490927 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
SCRN3-210ENST00000490927 DIEXFQ68CQ4 756 aaKnown RBP17.27■□□□□ 0.36
SCRN3-210ENST00000490927 ARAP1Q96P48 1450 aa17.26■□□□□ 0.35
SCRN3-210ENST00000490927 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
SCRN3-210ENST00000490927 ZNF316A6NFI3 1004 aaPredicted RBP17.24■□□□□ 0.35
SCRN3-210ENST00000490927 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
SCRN3-210ENST00000490927 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.35
SCRN3-210ENST00000490927 RRBP1Q9P2E9 1410 aaKnown RBP17.21■□□□□ 0.35
SCRN3-210ENST00000490927 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
SCRN3-210ENST00000490927 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
SCRN3-210ENST00000490927 DSG3P32926 999 aa17.11■□□□□ 0.33
SCRN3-210ENST00000490927 ARHGAP35Q9NRY4 1499 aa17.11■□□□□ 0.33
SCRN3-210ENST00000490927 IGF1RP08069 1367 aa17.06■□□□□ 0.32
SCRN3-210ENST00000490927 CHD1O14646 1710 aa17.06■□□□□ 0.32
SCRN3-210ENST00000490927 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
SCRN3-210ENST00000490927 DHX57Q6P158 1386 aaKnown RBP17.04■□□□□ 0.32
SCRN3-210ENST00000490927 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.31
SCRN3-210ENST00000490927 TIAM1Q13009 1591 aa17.02■□□□□ 0.31
SCRN3-210ENST00000490927 TTBK1Q5TCY1 1321 aaPredicted RBP17.01■□□□□ 0.31
SCRN3-210ENST00000490927 ABCB7O75027 752 aa17.01■□□□□ 0.31
SCRN3-210ENST00000490927 NEUROD1Q13562 356 aa17.01■□□□□ 0.31
SCRN3-210ENST00000490927 FHAD1B1AJZ9 1412 aa17■□□□□ 0.31
SCRN3-210ENST00000490927 CCNB3Q8WWL7 1395 aa17■□□□□ 0.31
SCRN3-210ENST00000490927 DNMBPQ6XZF7 1577 aa16.99■□□□□ 0.31
SCRN3-210ENST00000490927 POLA2Q14181 598 aa16.99■□□□□ 0.31
SCRN3-210ENST00000490927 CFAP43Q8NDM7 1665 aa16.99■□□□□ 0.31
SCRN3-210ENST00000490927 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
SCRN3-210ENST00000490927 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
SCRN3-210ENST00000490927 CARMIL1Q5VZK9 1371 aa16.98■□□□□ 0.31
SCRN3-210ENST00000490927 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCRN3-210ENST00000490927 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
SCRN3-210ENST00000490927 CUL7Q14999 1698 aa16.97■□□□□ 0.31
SCRN3-210ENST00000490927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.96■□□□□ 0.31
SCRN3-210ENST00000490927 TOPBP1Q92547 1522 aa16.94■□□□□ 0.3
SCRN3-210ENST00000490927 KANK4Q5T7N3 995 aaPredicted RBP16.93■□□□□ 0.3
SCRN3-210ENST00000490927 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
SCRN3-210ENST00000490927 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
SCRN3-210ENST00000490927 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
SCRN3-210ENST00000490927 FBLN2P98095 1184 aa16.87■□□□□ 0.29
SCRN3-210ENST00000490927 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
SCRN3-210ENST00000490927 CTTNBP2Q8WZ74 1663 aa16.86■□□□□ 0.29
SCRN3-210ENST00000490927 TIMELESSQ9UNS1 1208 aa16.85■□□□□ 0.29
SCRN3-210ENST00000490927 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
SCRN3-210ENST00000490927 CASKIN1Q8WXD9 1431 aa16.83■□□□□ 0.28
SCRN3-210ENST00000490927 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
SCRN3-210ENST00000490927 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
SCRN3-210ENST00000490927 SETD5Q9C0A6 1442 aa16.8■□□□□ 0.28
SCRN3-210ENST00000490927 MIER1Q8N108 512 aa16.8■□□□□ 0.28
SCRN3-210ENST00000490927 PCF11O94913 1555 aaKnown RBP16.8■□□□□ 0.28
SCRN3-210ENST00000490927 MAPKBP1O60336 1514 aa16.78■□□□□ 0.28
SCRN3-210ENST00000490927 FMN1Q68DA7 1419 aa16.77■□□□□ 0.27
SCRN3-210ENST00000490927 ABCA5Q8WWZ7 1642 aa16.76■□□□□ 0.27
SCRN3-210ENST00000490927 RAB3GAP2Q9H2M9 1393 aa16.76■□□□□ 0.27
SCRN3-210ENST00000490927 SAMD9Q5K651 1589 aa16.75■□□□□ 0.27
SCRN3-210ENST00000490927 RANGAP1P46060 587 aaPredicted RBP16.73■□□□□ 0.27
SCRN3-210ENST00000490927 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
SCRN3-210ENST00000490927 PHLDB1Q86UU1 1377 aa16.71■□□□□ 0.27
SCRN3-210ENST00000490927 SNAPC4Q5SXM2 1469 aa16.69■□□□□ 0.26
SCRN3-210ENST00000490927 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
SCRN3-210ENST00000490927 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
SCRN3-210ENST00000490927 MYT1Q01538 1121 aa16.65■□□□□ 0.26
SCRN3-210ENST00000490927 GAPVD1Q14C86 1478 aa16.65■□□□□ 0.26
SCRN3-210ENST00000490927 CHMP7Q8WUX9 453 aaPredicted RBP16.63■□□□□ 0.25
SCRN3-210ENST00000490927 FHOD3Q2V2M9 1422 aa16.62■□□□□ 0.25
SCRN3-210ENST00000490927 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
SCRN3-210ENST00000490927 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
SCRN3-210ENST00000490927 EHBP1L1Q8N3D4 1523 aa16.6■□□□□ 0.25
SCRN3-210ENST00000490927 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
SCRN3-210ENST00000490927 HFM1A2PYH4 1435 aa16.59■□□□□ 0.25
SCRN3-210ENST00000490927 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
SCRN3-210ENST00000490927 SUPT6HQ7KZ85 1726 aaKnown RBP16.59■□□□□ 0.25
SCRN3-210ENST00000490927 MKRN4PQ13434 485 aaPredicted RBP16.58■□□□□ 0.24
SCRN3-210ENST00000490927 ILDR1Q86SU0 546 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms