RNA–Protein interactions for RNA: ENST00000490927.5

SCRN3-210, Transcript of secernin 3, humanhuman

TSL 3

Gene SCRN3, Length 929 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-210ENST00000490927 AEBP2Q6ZN18 517 aaPredicted RBP28.87■■■□□ 2.21
SCRN3-210ENST00000490927 CHIC1Q5VXU3 224 aa28.16■■■□□ 2.1
SCRN3-210ENST00000490927 PHF23Q9BUL5 403 aaPredicted RBP24.75■■□□□ 1.55
SCRN3-210ENST00000490927 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
SCRN3-210ENST00000490927 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
SCRN3-210ENST00000490927 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
SCRN3-210ENST00000490927 FOXD1Q16676 465 aa22.76■■□□□ 1.23
SCRN3-210ENST00000490927 PPP6R1Q9UPN7 881 aa21.85■■□□□ 1.09
SCRN3-210ENST00000490927 ADRA2BP18089 450 aa21.82■■□□□ 1.08
SCRN3-210ENST00000490927 PIAS4Q8N2W9 510 aaPredicted RBP21.43■■□□□ 1.02
SCRN3-210ENST00000490927 ABCC9O60706 1549 aa21.22■□□□□ 0.99
SCRN3-210ENST00000490927 MSH5O43196 834 aa21.02■□□□□ 0.96
SCRN3-210ENST00000490927 CCDC180Q9P1Z9 1646 aa20.76■□□□□ 0.91
SCRN3-210ENST00000490927 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
SCRN3-210ENST00000490927 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
SCRN3-210ENST00000490927 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
SCRN3-210ENST00000490927 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
SCRN3-210ENST00000490927 SCAF1Q9H7N4 1312 aaKnown RBP20.01■□□□□ 0.79
SCRN3-210ENST00000490927 RB1CC1Q8TDY2 1594 aa19.89■□□□□ 0.77
SCRN3-210ENST00000490927 SHROOM4Q9ULL8 1493 aa19.89■□□□□ 0.77
SCRN3-210ENST00000490927 MAPK8IP2Q13387 824 aaPredicted RBP19.82■□□□□ 0.76
SCRN3-210ENST00000490927 PABPN1Q86U42 306 aaKnown RBP eCLIP19.66■□□□□ 0.74
SCRN3-210ENST00000490927 MYO15BQ96JP2 1530 aa19.61■□□□□ 0.73
SCRN3-210ENST00000490927 NACADO15069 1562 aa19.6■□□□□ 0.73
SCRN3-210ENST00000490927 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
SCRN3-210ENST00000490927 UNC13AQ9UPW8 1703 aa19.58■□□□□ 0.72
SCRN3-210ENST00000490927 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
SCRN3-210ENST00000490927 KCNA4P22459 653 aa19.57■□□□□ 0.72
SCRN3-210ENST00000490927 CNKSR2Q8WXI2 1034 aa19.57■□□□□ 0.72
SCRN3-210ENST00000490927 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
SCRN3-210ENST00000490927 BICRAQ9NZM4 1560 aa19.41■□□□□ 0.7
SCRN3-210ENST00000490927 DCAF8L2P0C7V8 631 aa19.35■□□□□ 0.69
SCRN3-210ENST00000490927 DNAJC5Q9H3Z4 198 aa19.28■□□□□ 0.68
SCRN3-210ENST00000490927 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.68
SCRN3-210ENST00000490927 POTEDQ86YR6 584 aa19.23■□□□□ 0.67
SCRN3-210ENST00000490927 RNF216Q9NWF9 866 aaPredicted RBP19.2■□□□□ 0.66
SCRN3-210ENST00000490927 CC2D2AQ9P2K1 1620 aa19.17■□□□□ 0.66
SCRN3-210ENST00000490927 CECR2Q9BXF3 1484 aa19.16■□□□□ 0.66
SCRN3-210ENST00000490927 HOXD11P31277 338 aaPredicted RBP19.15■□□□□ 0.66
SCRN3-210ENST00000490927 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
SCRN3-210ENST00000490927 EIF4G1Q04637 1599 aaKnown RBP18.94■□□□□ 0.62
SCRN3-210ENST00000490927 SCRIBQ14160 1630 aa18.94■□□□□ 0.62
SCRN3-210ENST00000490927 HRCP23327 699 aa18.88■□□□□ 0.61
SCRN3-210ENST00000490927 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
SCRN3-210ENST00000490927 SLC4A1APQ9BWU0 796 aaKnown RBP18.63■□□□□ 0.57
SCRN3-210ENST00000490927 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
SCRN3-210ENST00000490927 MROH2BQ7Z745 1585 aa18.57■□□□□ 0.56
SCRN3-210ENST00000490927 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
SCRN3-210ENST00000490927 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
SCRN3-210ENST00000490927 CUX2O14529 1486 aa18.52■□□□□ 0.56
SCRN3-210ENST00000490927 LOC105371045A0A1W2PR82 267 aa18.49■□□□□ 0.55
SCRN3-210ENST00000490927 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
SCRN3-210ENST00000490927 WIZO95785 1651 aa18.45■□□□□ 0.54
SCRN3-210ENST00000490927 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.54
SCRN3-210ENST00000490927 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
SCRN3-210ENST00000490927 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
SCRN3-210ENST00000490927 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
SCRN3-210ENST00000490927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCRN3-210ENST00000490927 PEG3Q9GZU2 1588 aa18.22■□□□□ 0.51
SCRN3-210ENST00000490927 SLC4A2P04920 1241 aa18.22■□□□□ 0.51
SCRN3-210ENST00000490927 SMARCA2P51531 1590 aa18.21■□□□□ 0.51
SCRN3-210ENST00000490927 EEA1Q15075 1411 aa18.18■□□□□ 0.5
SCRN3-210ENST00000490927 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.49
SCRN3-210ENST00000490927 WRNQ14191 1432 aaPredicted RBP eCLIP18.11■□□□□ 0.49
SCRN3-210ENST00000490927 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
SCRN3-210ENST00000490927 NESP48681 1621 aa18.08■□□□□ 0.48
SCRN3-210ENST00000490927 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
SCRN3-210ENST00000490927 PPARGC1BQ86YN6 1023 aaKnown RBP18.02■□□□□ 0.48
SCRN3-210ENST00000490927 THOC2Q8NI27 1593 aaKnown RBP18.02■□□□□ 0.48
SCRN3-210ENST00000490927 RNF39Q9H2S5 420 aa18.01■□□□□ 0.47
SCRN3-210ENST00000490927 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
SCRN3-210ENST00000490927 ZBTB22O15209 634 aa17.99■□□□□ 0.47
SCRN3-210ENST00000490927 TNIKQ9UKE5 1360 aa17.98■□□□□ 0.47
SCRN3-210ENST00000490927 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
SCRN3-210ENST00000490927 FAM9AQ8IZU1 332 aaPredicted RBP17.96■□□□□ 0.47
SCRN3-210ENST00000490927 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
SCRN3-210ENST00000490927 U3KPZ7 1027 aaPredicted RBP17.92■□□□□ 0.46
SCRN3-210ENST00000490927 HMGXB3Q12766 1538 aa17.91■□□□□ 0.46
SCRN3-210ENST00000490927 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
SCRN3-210ENST00000490927 KIF21BO75037 1637 aa17.85■□□□□ 0.45
SCRN3-210ENST00000490927 KIF21AQ7Z4S6 1674 aa17.85■□□□□ 0.45
SCRN3-210ENST00000490927 CEP162Q5TB80 1403 aa17.84■□□□□ 0.45
SCRN3-210ENST00000490927 GOLGA3Q08378 1498 aa17.83■□□□□ 0.45
SCRN3-210ENST00000490927 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
SCRN3-210ENST00000490927 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
SCRN3-210ENST00000490927 LAMC3Q9Y6N6 1575 aa17.8■□□□□ 0.44
SCRN3-210ENST00000490927 SOGA1O94964 1423 aa17.78■□□□□ 0.44
SCRN3-210ENST00000490927 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
SCRN3-210ENST00000490927 CEP164Q9UPV0 1460 aa17.76■□□□□ 0.43
SCRN3-210ENST00000490927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.43
SCRN3-210ENST00000490927 HNRNPUL2Q1KMD3 747 aaKnown RBP17.71■□□□□ 0.43
SCRN3-210ENST00000490927 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
SCRN3-210ENST00000490927 PDS5BQ9NTI5 1447 aa17.69■□□□□ 0.42
SCRN3-210ENST00000490927 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
SCRN3-210ENST00000490927 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
SCRN3-210ENST00000490927 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.41
SCRN3-210ENST00000490927 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
SCRN3-210ENST00000490927 WDR62O43379 1518 aa17.6■□□□□ 0.41
SCRN3-210ENST00000490927 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
SCRN3-210ENST00000490927 MRC2Q9UBG0 1479 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms