RNA–Protein interactions for RNA: ENST00000490728.5

ARHGEF4-209, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 2

Gene ARHGEF4, Length 3,229 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-209ENST00000490728 PHLDB1Q86UU1 1377 aa23.03■■□□□ 1.28
ARHGEF4-209ENST00000490728 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
ARHGEF4-209ENST00000490728 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
ARHGEF4-209ENST00000490728 CLSPNQ9HAW4 1339 aa23.01■■□□□ 1.27
ARHGEF4-209ENST00000490728 CC2D2AQ9P2K1 1620 aa23■■□□□ 1.27
ARHGEF4-209ENST00000490728 KCNH8Q96L42 1107 aa22.99■■□□□ 1.27
ARHGEF4-209ENST00000490728 ARID3CA6NKF2 412 aa22.95■■□□□ 1.27
ARHGEF4-209ENST00000490728 TDRD9Q8NDG6 1382 aaKnown RBP22.93■■□□□ 1.26
ARHGEF4-209ENST00000490728 DDX10Q13206 875 aaKnown RBP22.92■■□□□ 1.26
ARHGEF4-209ENST00000490728 LRRC9Q6ZRR7 1453 aa22.91■■□□□ 1.26
ARHGEF4-209ENST00000490728 TIAM1Q13009 1591 aa22.9■■□□□ 1.26
ARHGEF4-209ENST00000490728 SETD5Q9C0A6 1442 aa22.89■■□□□ 1.25
ARHGEF4-209ENST00000490728 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
ARHGEF4-209ENST00000490728 FHAD1B1AJZ9 1412 aa22.83■■□□□ 1.25
ARHGEF4-209ENST00000490728 PCF11O94913 1555 aaKnown RBP22.81■■□□□ 1.24
ARHGEF4-209ENST00000490728 TOPBP1Q92547 1522 aa22.81■■□□□ 1.24
ARHGEF4-209ENST00000490728 MAPKBP1O60336 1514 aa22.78■■□□□ 1.24
ARHGEF4-209ENST00000490728 CHIC2Q9UKJ5 165 aa22.77■■□□□ 1.24
ARHGEF4-209ENST00000490728 MTUS2Q5JR59 1369 aa22.77■■□□□ 1.23
ARHGEF4-209ENST00000490728 PRDM2Q13029 1718 aa22.75■■□□□ 1.23
ARHGEF4-209ENST00000490728 BCANQ96GW7 911 aa22.73■■□□□ 1.23
ARHGEF4-209ENST00000490728 DNMBPQ6XZF7 1577 aa22.7■■□□□ 1.23
ARHGEF4-209ENST00000490728 WDR97A6NE52 1622 aa22.7■■□□□ 1.22
ARHGEF4-209ENST00000490728 RRP7BPQ9NSQ0 103 aa22.7■■□□□ 1.22
ARHGEF4-209ENST00000490728 ABCA10Q8WWZ4 1543 aa22.69■■□□□ 1.22
ARHGEF4-209ENST00000490728 SUPT16HQ9Y5B9 1047 aaKnown RBP22.69■■□□□ 1.22
ARHGEF4-209ENST00000490728 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
ARHGEF4-209ENST00000490728 CASKIN1Q8WXD9 1431 aa22.64■■□□□ 1.21
ARHGEF4-209ENST00000490728 TRIM52Q96A61 297 aa22.63■■□□□ 1.21
ARHGEF4-209ENST00000490728 MAP3K1Q13233 1512 aa22.63■■□□□ 1.21
ARHGEF4-209ENST00000490728 PPP1R15AO75807 674 aaPredicted RBP22.62■■□□□ 1.21
ARHGEF4-209ENST00000490728 TONSLQ96HA7 1378 aa22.6■■□□□ 1.21
ARHGEF4-209ENST00000490728 FYCO1Q9BQS8 1478 aa22.59■■□□□ 1.21
ARHGEF4-209ENST00000490728 FGD6Q6ZV73 1430 aa22.59■■□□□ 1.21
ARHGEF4-209ENST00000490728 PTPRKQ15262 1439 aa22.58■■□□□ 1.21
ARHGEF4-209ENST00000490728 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.21
ARHGEF4-209ENST00000490728 FMN1Q68DA7 1419 aa22.58■■□□□ 1.21
ARHGEF4-209ENST00000490728 FOXD1Q16676 465 aa22.53■■□□□ 1.2
ARHGEF4-209ENST00000490728 CFAP43Q8NDM7 1665 aa22.53■■□□□ 1.2
ARHGEF4-209ENST00000490728 ANP32CO43423 234 aa22.5■■□□□ 1.19
ARHGEF4-209ENST00000490728 CCDC18Q5T9S5 1454 aa22.5■■□□□ 1.19
ARHGEF4-209ENST00000490728 AQRO60306 1485 aaKnown RBP eCLIP22.49■■□□□ 1.19
ARHGEF4-209ENST00000490728 EFCAB5A4FU69 1503 aa22.49■■□□□ 1.19
ARHGEF4-209ENST00000490728 FKBP8Q14318 412 aa22.49■■□□□ 1.19
ARHGEF4-209ENST00000490728 NCOA2Q15596 1464 aa22.48■■□□□ 1.19
ARHGEF4-209ENST00000490728 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
ARHGEF4-209ENST00000490728 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
ARHGEF4-209ENST00000490728 CNGB1Q14028 1251 aaPredicted RBP22.45■■□□□ 1.18
ARHGEF4-209ENST00000490728 CUL7Q14999 1698 aa22.44■■□□□ 1.18
ARHGEF4-209ENST00000490728 CTTNBP2Q8WZ74 1663 aa22.43■■□□□ 1.18
ARHGEF4-209ENST00000490728 MYOM3Q5VTT5 1437 aa22.41■■□□□ 1.18
ARHGEF4-209ENST00000490728 FBLN2P98095 1184 aa22.39■■□□□ 1.18
ARHGEF4-209ENST00000490728 NAIPQ13075 1403 aa22.38■■□□□ 1.17
ARHGEF4-209ENST00000490728 TIMELESSQ9UNS1 1208 aa22.38■■□□□ 1.17
ARHGEF4-209ENST00000490728 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
ARHGEF4-209ENST00000490728 HFM1A2PYH4 1435 aa22.36■■□□□ 1.17
ARHGEF4-209ENST00000490728 ZNF644Q9H582 1327 aaPredicted RBP22.35■■□□□ 1.17
ARHGEF4-209ENST00000490728 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
ARHGEF4-209ENST00000490728 UACAQ9BZF9 1416 aa22.35■■□□□ 1.17
ARHGEF4-209ENST00000490728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.33■■□□□ 1.17
ARHGEF4-209ENST00000490728 CDK13Q14004 1512 aaKnown RBP22.33■■□□□ 1.16
ARHGEF4-209ENST00000490728 MAGI3Q5TCQ9 1506 aa22.32■■□□□ 1.16
ARHGEF4-209ENST00000490728 ZNF777Q9ULD5 760 aaPredicted RBP22.32■■□□□ 1.16
ARHGEF4-209ENST00000490728 KIF21AQ7Z4S6 1674 aa22.32■■□□□ 1.16
ARHGEF4-209ENST00000490728 HSPA5P11021 654 aaKnown RBP22.32■■□□□ 1.16
ARHGEF4-209ENST00000490728 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
ARHGEF4-209ENST00000490728 PTPN23Q9H3S7 1636 aa22.3■■□□□ 1.16
ARHGEF4-209ENST00000490728 LRRIQ1Q96JM4 1722 aa22.3■■□□□ 1.16
ARHGEF4-209ENST00000490728 TSHZ2Q9NRE2 1034 aa22.3■■□□□ 1.16
ARHGEF4-209ENST00000490728 NEFLP07196 543 aa22.29■■□□□ 1.16
ARHGEF4-209ENST00000490728 IRX6P78412 446 aaPredicted RBP22.29■■□□□ 1.16
ARHGEF4-209ENST00000490728 MPHOSPH9Q99550 1183 aa22.29■■□□□ 1.16
ARHGEF4-209ENST00000490728 POLR3GLQ9BT43 218 aa22.28■■□□□ 1.16
ARHGEF4-209ENST00000490728 HNRNPUQ00839 825 aaKnown RBP eCLIP22.27■■□□□ 1.16
ARHGEF4-209ENST00000490728 L3MBTL2Q969R5 705 aa22.27■■□□□ 1.15
ARHGEF4-209ENST00000490728 SAMD9Q5K651 1589 aa22.26■■□□□ 1.15
ARHGEF4-209ENST00000490728 ZNF326Q5BKZ1 582 aaKnown RBP22.25■■□□□ 1.15
ARHGEF4-209ENST00000490728 ZNF608Q9ULD9 1512 aaPredicted RBP22.23■■□□□ 1.15
ARHGEF4-209ENST00000490728 SUPT6HQ7KZ85 1726 aaKnown RBP22.23■■□□□ 1.15
ARHGEF4-209ENST00000490728 EHBP1L1Q8N3D4 1523 aa22.22■■□□□ 1.15
ARHGEF4-209ENST00000490728 CCER2I3L3R5 266 aa22.21■■□□□ 1.15
ARHGEF4-209ENST00000490728 SENP3-EIF4A1A0A087X0R7 540 aa22.2■■□□□ 1.14
ARHGEF4-209ENST00000490728 EPRSP07814 1512 aaKnown RBP22.2■■□□□ 1.14
ARHGEF4-209ENST00000490728 WASHC2AQ641Q2 1341 aa22.2■■□□□ 1.14
ARHGEF4-209ENST00000490728 SLC4A1APQ9BWU0 796 aaKnown RBP22.2■■□□□ 1.14
ARHGEF4-209ENST00000490728 EIF4G2P78344 907 aaKnown RBP eCLIP22.19■■□□□ 1.14
ARHGEF4-209ENST00000490728 UGGT2Q9NYU1 1516 aa22.19■■□□□ 1.14
ARHGEF4-209ENST00000490728 CCDC184Q52MB2 194 aa22.18■■□□□ 1.14
ARHGEF4-209ENST00000490728 KDM6BO15054 1643 aa22.18■■□□□ 1.14
ARHGEF4-209ENST00000490728 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
ARHGEF4-209ENST00000490728 C11orf95C9JLR9 678 aaPredicted RBP22.17■■□□□ 1.14
ARHGEF4-209ENST00000490728 FAM9BQ8IZU0 186 aa22.16■■□□□ 1.14
ARHGEF4-209ENST00000490728 THOC2Q8NI27 1593 aaKnown RBP22.15■■□□□ 1.14
ARHGEF4-209ENST00000490728 CHMP7Q8WUX9 453 aaPredicted RBP22.15■■□□□ 1.14
ARHGEF4-209ENST00000490728 IQGAP2Q13576 1575 aa22.14■■□□□ 1.14
ARHGEF4-209ENST00000490728 NBPF8Q3BBV2 869 aa22.13■■□□□ 1.13
ARHGEF4-209ENST00000490728 CFDP1Q9UEE9 299 aaPredicted RBP22.1■■□□□ 1.13
ARHGEF4-209ENST00000490728 DENND4BO75064 1496 aaPredicted RBP22.09■■□□□ 1.13
ARHGEF4-209ENST00000490728 HECW1Q76N89 1606 aa22.08■■□□□ 1.13
ARHGEF4-209ENST00000490728 MRC2Q9UBG0 1479 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms