RNA–Protein interactions for RNA: ENST00000490728.5

ARHGEF4-209, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 2

Gene ARHGEF4, Length 3,229 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-209ENST00000490728 NISCHQ9Y2I1 1504 aa32.35■■■□□ 2.77
ARHGEF4-209ENST00000490728 SHROOM4Q9ULL8 1493 aa28.44■■■□□ 2.14
ARHGEF4-209ENST00000490728 SUPT5HO00267 1087 aaKnown RBP27.93■■■□□ 2.06
ARHGEF4-209ENST00000490728 DCAF8L2P0C7V8 631 aa27.85■■■□□ 2.05
ARHGEF4-209ENST00000490728 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
ARHGEF4-209ENST00000490728 CCDC180Q9P1Z9 1646 aa27.1■■□□□ 1.93
ARHGEF4-209ENST00000490728 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
ARHGEF4-209ENST00000490728 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.86
ARHGEF4-209ENST00000490728 LOC105371045A0A1W2PR82 267 aa26.32■■□□□ 1.8
ARHGEF4-209ENST00000490728 PCGF6Q9BYE7 350 aa26.3■■□□□ 1.8
ARHGEF4-209ENST00000490728 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
ARHGEF4-209ENST00000490728 EHMT2Q96KQ7 1210 aa26.04■■□□□ 1.76
ARHGEF4-209ENST00000490728 SCRIBQ14160 1630 aa26.02■■□□□ 1.76
ARHGEF4-209ENST00000490728 HRCP23327 699 aa25.99■■□□□ 1.75
ARHGEF4-209ENST00000490728 FAM9AQ8IZU1 332 aaPredicted RBP25.95■■□□□ 1.75
ARHGEF4-209ENST00000490728 ABCC9O60706 1549 aa25.91■■□□□ 1.74
ARHGEF4-209ENST00000490728 PPARGC1BQ86YN6 1023 aaKnown RBP25.88■■□□□ 1.73
ARHGEF4-209ENST00000490728 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
ARHGEF4-209ENST00000490728 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
ARHGEF4-209ENST00000490728 CECR2Q9BXF3 1484 aa25.53■■□□□ 1.68
ARHGEF4-209ENST00000490728 RB1CC1Q8TDY2 1594 aa25.51■■□□□ 1.67
ARHGEF4-209ENST00000490728 TRIM26Q12899 539 aaPredicted RBP25.44■■□□□ 1.66
ARHGEF4-209ENST00000490728 MROH2BQ7Z745 1585 aa25.32■■□□□ 1.64
ARHGEF4-209ENST00000490728 NACADO15069 1562 aa25.23■■□□□ 1.63
ARHGEF4-209ENST00000490728 WIZO95785 1651 aa25.17■■□□□ 1.62
ARHGEF4-209ENST00000490728 TTBK1Q5TCY1 1321 aaPredicted RBP25.13■■□□□ 1.61
ARHGEF4-209ENST00000490728 PABPN1Q86U42 306 aaKnown RBP eCLIP25.06■■□□□ 1.6
ARHGEF4-209ENST00000490728 BAZ1AQ9NRL2 1556 aaPredicted RBP24.79■■□□□ 1.56
ARHGEF4-209ENST00000490728 ABCC8Q09428 1581 aa24.78■■□□□ 1.56
ARHGEF4-209ENST00000490728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.78■■□□□ 1.56
ARHGEF4-209ENST00000490728 ZEB1P37275 1124 aaPredicted RBP24.74■■□□□ 1.55
ARHGEF4-209ENST00000490728 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.54
ARHGEF4-209ENST00000490728 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
ARHGEF4-209ENST00000490728 CCER1Q8TC90 406 aaPredicted RBP24.64■■□□□ 1.53
ARHGEF4-209ENST00000490728 SOGA1O94964 1423 aa24.61■■□□□ 1.53
ARHGEF4-209ENST00000490728 RANGAP1P46060 587 aaPredicted RBP24.59■■□□□ 1.53
ARHGEF4-209ENST00000490728 SMARCA4P51532 1647 aa24.59■■□□□ 1.53
ARHGEF4-209ENST00000490728 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
ARHGEF4-209ENST00000490728 RUSC2Q8N2Y8 1516 aa24.51■■□□□ 1.51
ARHGEF4-209ENST00000490728 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
ARHGEF4-209ENST00000490728 CSRNP3Q8WYN3 585 aa24.48■■□□□ 1.51
ARHGEF4-209ENST00000490728 EIF4G1Q04637 1599 aaKnown RBP24.48■■□□□ 1.51
ARHGEF4-209ENST00000490728 UNC13AQ9UPW8 1703 aa24.47■■□□□ 1.51
ARHGEF4-209ENST00000490728 CEP162Q5TB80 1403 aa24.41■■□□□ 1.5
ARHGEF4-209ENST00000490728 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
ARHGEF4-209ENST00000490728 WRNQ14191 1432 aaPredicted RBP eCLIP24.25■■□□□ 1.47
ARHGEF4-209ENST00000490728 HNRNPUL2Q1KMD3 747 aaKnown RBP24.25■■□□□ 1.47
ARHGEF4-209ENST00000490728 TNIKQ9UKE5 1360 aa24.23■■□□□ 1.47
ARHGEF4-209ENST00000490728 SCAF1Q9H7N4 1312 aaKnown RBP24.11■■□□□ 1.45
ARHGEF4-209ENST00000490728 GOLGA3Q08378 1498 aa24.1■■□□□ 1.45
ARHGEF4-209ENST00000490728 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
ARHGEF4-209ENST00000490728 ATAD2BQ9ULI0 1458 aa24.08■■□□□ 1.44
ARHGEF4-209ENST00000490728 DIEXFQ68CQ4 756 aaKnown RBP24.05■■□□□ 1.44
ARHGEF4-209ENST00000490728 EEA1Q15075 1411 aa24.05■■□□□ 1.44
ARHGEF4-209ENST00000490728 APLP2Q06481 763 aa24.05■■□□□ 1.44
ARHGEF4-209ENST00000490728 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
ARHGEF4-209ENST00000490728 CLIP1P30622 1438 aa23.98■■□□□ 1.43
ARHGEF4-209ENST00000490728 RAPGEF2Q9Y4G8 1499 aa23.92■■□□□ 1.42
ARHGEF4-209ENST00000490728 CEP164Q9UPV0 1460 aa23.92■■□□□ 1.42
ARHGEF4-209ENST00000490728 NEUROD1Q13562 356 aa23.89■■□□□ 1.42
ARHGEF4-209ENST00000490728 YTHDC1Q96MU7 727 aaKnown RBP23.87■■□□□ 1.41
ARHGEF4-209ENST00000490728 PEG3Q9GZU2 1588 aa23.84■■□□□ 1.41
ARHGEF4-209ENST00000490728 ACIN1Q9UKV3 1341 aaKnown RBP23.77■■□□□ 1.4
ARHGEF4-209ENST00000490728 ZNF316A6NFI3 1004 aaPredicted RBP23.77■■□□□ 1.4
ARHGEF4-209ENST00000490728 ITGAEP38570 1179 aa23.74■■□□□ 1.39
ARHGEF4-209ENST00000490728 VPS8Q8N3P4 1428 aa23.74■■□□□ 1.39
ARHGEF4-209ENST00000490728 KANK4Q5T7N3 995 aaPredicted RBP23.69■■□□□ 1.38
ARHGEF4-209ENST00000490728 GTF3C3Q9Y5Q9 886 aa23.69■■□□□ 1.38
ARHGEF4-209ENST00000490728 KIF21BO75037 1637 aa23.68■■□□□ 1.38
ARHGEF4-209ENST00000490728 CENPBP07199 599 aaPredicted RBP23.64■■□□□ 1.38
ARHGEF4-209ENST00000490728 MIER1Q8N108 512 aa23.59■■□□□ 1.37
ARHGEF4-209ENST00000490728 TOP2BQ02880 1626 aa23.57■■□□□ 1.36
ARHGEF4-209ENST00000490728 ATP1B4Q9UN42 357 aaPredicted RBP23.56■■□□□ 1.36
ARHGEF4-209ENST00000490728 P3H3Q8IVL6 736 aa23.53■■□□□ 1.36
ARHGEF4-209ENST00000490728 CUX1P39880 1505 aa23.51■■□□□ 1.35
ARHGEF4-209ENST00000490728 KIF27Q86VH2 1401 aa23.48■■□□□ 1.35
ARHGEF4-209ENST00000490728 NCAPD3P42695 1498 aa23.47■■□□□ 1.35
ARHGEF4-209ENST00000490728 ARAP1Q96P48 1450 aa23.45■■□□□ 1.34
ARHGEF4-209ENST00000490728 PRXQ9BXM0 1461 aa23.45■■□□□ 1.34
ARHGEF4-209ENST00000490728 CUX2O14529 1486 aa23.38■■□□□ 1.33
ARHGEF4-209ENST00000490728 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
ARHGEF4-209ENST00000490728 CFTRP13569 1480 aa23.34■■□□□ 1.33
ARHGEF4-209ENST00000490728 HMGXB3Q12766 1538 aa23.32■■□□□ 1.32
ARHGEF4-209ENST00000490728 DHX57Q6P158 1386 aaKnown RBP23.31■■□□□ 1.32
ARHGEF4-209ENST00000490728 FAM50AQ14320 339 aaKnown RBP23.29■■□□□ 1.32
ARHGEF4-209ENST00000490728 ERICH3Q5RHP9 1530 aa23.28■■□□□ 1.32
ARHGEF4-209ENST00000490728 ARHGAP35Q9NRY4 1499 aa23.27■■□□□ 1.32
ARHGEF4-209ENST00000490728 IGF1RP08069 1367 aa23.27■■□□□ 1.32
ARHGEF4-209ENST00000490728 CARMIL1Q5VZK9 1371 aa23.23■■□□□ 1.31
ARHGEF4-209ENST00000490728 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
ARHGEF4-209ENST00000490728 CCNB3Q8WWL7 1395 aa23.21■■□□□ 1.31
ARHGEF4-209ENST00000490728 PELP1Q8IZL8 1130 aaKnown RBP23.2■■□□□ 1.3
ARHGEF4-209ENST00000490728 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
ARHGEF4-209ENST00000490728 SIN3AQ96ST3 1273 aa23.11■■□□□ 1.29
ARHGEF4-209ENST00000490728 RAD54L2Q9Y4B4 1467 aa23.1■■□□□ 1.29
ARHGEF4-209ENST00000490728 RRBP1Q9P2E9 1410 aaKnown RBP23.08■■□□□ 1.29
ARHGEF4-209ENST00000490728 RAB3GAP2Q9H2M9 1393 aa23.08■■□□□ 1.28
ARHGEF4-209ENST00000490728 HIRIP3Q9BW71 556 aaPredicted RBP23.07■■□□□ 1.28
ARHGEF4-209ENST00000490728 NESP48681 1621 aa23.05■■□□□ 1.28
ARHGEF4-209ENST00000490728 FHOD3Q2V2M9 1422 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms