RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 RAB3GAP2Q9H2M9 1393 aa19.41■□□□□ 0.7
TNXB-206ENST00000490077 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
TNXB-206ENST00000490077 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
TNXB-206ENST00000490077 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
TNXB-206ENST00000490077 FHOD3Q2V2M9 1422 aa19.35■□□□□ 0.69
TNXB-206ENST00000490077 ARID3CA6NKF2 412 aa19.34■□□□□ 0.69
TNXB-206ENST00000490077 PELP1Q8IZL8 1130 aaKnown RBP19.33■□□□□ 0.68
TNXB-206ENST00000490077 DDX10Q13206 875 aaKnown RBP19.32■□□□□ 0.68
TNXB-206ENST00000490077 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
TNXB-206ENST00000490077 MAPKBP1O60336 1514 aa19.28■□□□□ 0.68
TNXB-206ENST00000490077 TDRD9Q8NDG6 1382 aaKnown RBP19.24■□□□□ 0.67
TNXB-206ENST00000490077 BCANQ96GW7 911 aa19.24■□□□□ 0.67
TNXB-206ENST00000490077 DNMBPQ6XZF7 1577 aa19.24■□□□□ 0.67
TNXB-206ENST00000490077 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
TNXB-206ENST00000490077 LRRC9Q6ZRR7 1453 aa19.22■□□□□ 0.67
TNXB-206ENST00000490077 SUPT16HQ9Y5B9 1047 aaKnown RBP19.21■□□□□ 0.67
TNXB-206ENST00000490077 TIAM1Q13009 1591 aa19.2■□□□□ 0.66
TNXB-206ENST00000490077 WDR97A6NE52 1622 aa19.2■□□□□ 0.66
TNXB-206ENST00000490077 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
TNXB-206ENST00000490077 SETD5Q9C0A6 1442 aa19.17■□□□□ 0.66
TNXB-206ENST00000490077 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
TNXB-206ENST00000490077 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
TNXB-206ENST00000490077 PCF11O94913 1555 aaKnown RBP19.17■□□□□ 0.66
TNXB-206ENST00000490077 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
TNXB-206ENST00000490077 CHIC2Q9UKJ5 165 aa19.15■□□□□ 0.66
TNXB-206ENST00000490077 KIF21AQ7Z4S6 1674 aa19.14■□□□□ 0.65
TNXB-206ENST00000490077 PTPRKQ15262 1439 aa19.14■□□□□ 0.65
TNXB-206ENST00000490077 TRIM52Q96A61 297 aa19.11■□□□□ 0.65
TNXB-206ENST00000490077 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.65
TNXB-206ENST00000490077 RRP7BPQ9NSQ0 103 aa19.08■□□□□ 0.64
TNXB-206ENST00000490077 FOXD1Q16676 465 aa19.07■□□□□ 0.64
TNXB-206ENST00000490077 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.643e-8■■■■□ 25.5
TNXB-206ENST00000490077 PPP1R15AO75807 674 aaPredicted RBP19.03■□□□□ 0.64
TNXB-206ENST00000490077 MTUS2Q5JR59 1369 aa18.97■□□□□ 0.63
TNXB-206ENST00000490077 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
TNXB-206ENST00000490077 FKBP8Q14318 412 aa18.95■□□□□ 0.62
TNXB-206ENST00000490077 SENP3-EIF4A1A0A087X0R7 540 aa18.94■□□□□ 0.62
TNXB-206ENST00000490077 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
TNXB-206ENST00000490077 TSHZ2Q9NRE2 1034 aa18.93■□□□□ 0.62
TNXB-206ENST00000490077 MRC2Q9UBG0 1479 aa18.93■□□□□ 0.62
TNXB-206ENST00000490077 FGD6Q6ZV73 1430 aa18.93■□□□□ 0.62
TNXB-206ENST00000490077 CASKIN1Q8WXD9 1431 aa18.92■□□□□ 0.62
TNXB-206ENST00000490077 IRX6P78412 446 aaPredicted RBP18.91■□□□□ 0.62
TNXB-206ENST00000490077 ABCA5Q8WWZ7 1642 aa18.9■□□□□ 0.62
TNXB-206ENST00000490077 LRRIQ1Q96JM4 1722 aa18.9■□□□□ 0.62
TNXB-206ENST00000490077 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
TNXB-206ENST00000490077 GAPVD1Q14C86 1478 aa18.89■□□□□ 0.61
TNXB-206ENST00000490077 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.61
TNXB-206ENST00000490077 CCDC184Q52MB2 194 aa18.89■□□□□ 0.61
TNXB-206ENST00000490077 MAGI3Q5TCQ9 1506 aa18.88■□□□□ 0.61
TNXB-206ENST00000490077 CUL7Q14999 1698 aa18.88■□□□□ 0.61
TNXB-206ENST00000490077 MAP3K1Q13233 1512 aa18.88■□□□□ 0.61
TNXB-206ENST00000490077 ZNF644Q9H582 1327 aaPredicted RBP18.88■□□□□ 0.61
TNXB-206ENST00000490077 CFAP43Q8NDM7 1665 aa18.88■□□□□ 0.61
TNXB-206ENST00000490077 CCDC18Q5T9S5 1454 aa18.86■□□□□ 0.61
TNXB-206ENST00000490077 FYCO1Q9BQS8 1478 aa18.85■□□□□ 0.61
TNXB-206ENST00000490077 NCOA2Q15596 1464 aa18.85■□□□□ 0.61
TNXB-206ENST00000490077 C11orf95C9JLR9 678 aaPredicted RBP18.84■□□□□ 0.61
TNXB-206ENST00000490077 TONSLQ96HA7 1378 aa18.84■□□□□ 0.61
TNXB-206ENST00000490077 NAIPQ13075 1403 aa18.83■□□□□ 0.6
TNXB-206ENST00000490077 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
TNXB-206ENST00000490077 KDM6BO15054 1643 aa18.81■□□□□ 0.6
TNXB-206ENST00000490077 WDR62O43379 1518 aa18.8■□□□□ 0.6
TNXB-206ENST00000490077 DENND4BO75064 1496 aaPredicted RBP18.79■□□□□ 0.6
TNXB-206ENST00000490077 CDK13Q14004 1512 aaKnown RBP18.78■□□□□ 0.6
TNXB-206ENST00000490077 FMN1Q68DA7 1419 aa18.77■□□□□ 0.6
TNXB-206ENST00000490077 HSPA5P11021 654 aaKnown RBP18.77■□□□□ 0.6
TNXB-206ENST00000490077 ANP32CO43423 234 aa18.76■□□□□ 0.59
TNXB-206ENST00000490077 WASHC2AQ641Q2 1341 aa18.75■□□□□ 0.59
TNXB-206ENST00000490077 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
TNXB-206ENST00000490077 CTTNBP2Q8WZ74 1663 aa18.75■□□□□ 0.59
TNXB-206ENST00000490077 MYOM3Q5VTT5 1437 aa18.74■□□□□ 0.59
TNXB-206ENST00000490077 PBRM1Q86U86 1689 aa18.74■□□□□ 0.59
TNXB-206ENST00000490077 ZNF608Q9ULD9 1512 aaPredicted RBP18.73■□□□□ 0.59
TNXB-206ENST00000490077 HFM1A2PYH4 1435 aa18.73■□□□□ 0.59
TNXB-206ENST00000490077 L3MBTL2Q969R5 705 aa18.73■□□□□ 0.59
TNXB-206ENST00000490077 PTPN23Q9H3S7 1636 aa18.73■□□□□ 0.59
TNXB-206ENST00000490077 KDM5BQ9UGL1 1544 aa18.73■□□□□ 0.59
TNXB-206ENST00000490077 IFT140Q96RY7 1462 aa18.72■□□□□ 0.59
TNXB-206ENST00000490077 NBPF8Q3BBV2 869 aa18.71■□□□□ 0.59
TNXB-206ENST00000490077 EFCAB5A4FU69 1503 aa18.71■□□□□ 0.59
TNXB-206ENST00000490077 UACAQ9BZF9 1416 aa18.7■□□□□ 0.58
TNXB-206ENST00000490077 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
TNXB-206ENST00000490077 HNRNPUQ00839 825 aaKnown RBP eCLIP18.69■□□□□ 0.58
TNXB-206ENST00000490077 MPHOSPH9Q99550 1183 aa18.69■□□□□ 0.58
TNXB-206ENST00000490077 FBLN2P98095 1184 aa18.67■□□□□ 0.58
TNXB-206ENST00000490077 SAMD9Q5K651 1589 aa18.66■□□□□ 0.58
TNXB-206ENST00000490077 ZNF777Q9ULD5 760 aaPredicted RBP18.66■□□□□ 0.58
TNXB-206ENST00000490077 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
TNXB-206ENST00000490077 ZNF326Q5BKZ1 582 aaKnown RBP18.64■□□□□ 0.57
TNXB-206ENST00000490077 POLR3GLQ9BT43 218 aa18.64■□□□□ 0.57
TNXB-206ENST00000490077 FAM9BQ8IZU0 186 aa18.62■□□□□ 0.57
TNXB-206ENST00000490077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.62■□□□□ 0.57
TNXB-206ENST00000490077 EIF4G3O43432 1585 aaKnown RBP18.6■□□□□ 0.57
TNXB-206ENST00000490077 UGGT2Q9NYU1 1516 aa18.6■□□□□ 0.57
TNXB-206ENST00000490077 TIMELESSQ9UNS1 1208 aa18.6■□□□□ 0.57
TNXB-206ENST00000490077 EPRSP07814 1512 aaKnown RBP18.6■□□□□ 0.57
TNXB-206ENST00000490077 CCER2I3L3R5 266 aa18.57■□□□□ 0.56
TNXB-206ENST00000490077 SUPT6HQ7KZ85 1726 aaKnown RBP18.55■□□□□ 0.56
TNXB-206ENST00000490077 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms